Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold16G07780 Striga asiatica HOM05D001391 ORTHO05D005432 5.6e-198 694.1 358 100.0
Sopen05g007170 Solanum pennellii HOM05D001391 ORTHO05D005432 4.8e-165 584.7 361 82.5
DCAR_007192 Daucus carota HOM05D001391 ORTHO05D005432 6.0e-160 567.8 351 82.9
CiPaw.06G092300 Carya illinoinensis HOM05D001391 ORTHO05D005432 7.9e-160 567.4 363 79.1
Cc11_g12040 Coffea canephora HOM05D001391 ORTHO05D005432 6.7e-159 564.3 355 80.8
Lj3C1030G23 Lonicera japonica HOM05D001391 ORTHO05D005432 1.1e-158 563.5 328 85.7
CAN.G616.39 Capsicum annuum HOM05D001391 ORTHO05D005432 7.4e-158 560.8 360 80.0
TWI31G1273 Tripterygium wilfordii HOM05D001391 ORTHO05D005432 1.1e-156 557.0 356 78.4
Potri.010G158700 Populus trichocarpa HOM05D001391 ORTHO05D005432 1.5e-155 553.1 347 79.8
Oeu048144.1 Olea europaea HOM05D001391 ORTHO05D005432 2.0e-155 552.7 309 90.0
Sabra10G0120500 Salix brachista HOM05D001391 ORTHO05D005432 3.4e-155 552.0 346 81.2
PGSC0003DMG400028375 Solanum tuberosum HOM05D001391 ORTHO05D005432 3.4e-155 552.0 334 83.2
QL03p071791 Quercus lobata HOM05D001391 ORTHO05D005432 1.3e-154 550.1 353 79.3
ECA246G4329 Erigeron canadensis HOM05D001391 ORTHO05D005432 2.2e-154 549.3 332 81.9
HanXRQChr15g0477081 Helianthus annuus HOM05D001391 ORTHO05D005432 2.2e-154 549.3 338 80.5
QL03p072323 Quercus lobata HOM05D001391 ORTHO05D005432 3.8e-154 548.5 355 78.6
CSS0007431 Camellia sinensis var. sinensis HOM05D001391 ORTHO05D005432 4.9e-154 548.1 335 82.1
CSS0028231 Camellia sinensis var. sinensis HOM05D001391 ORTHO05D005432 4.9e-154 548.1 335 82.1
TAR629G1471 Trochodendron aralioides HOM05D001391 ORTHO05D005432 7.1e-153 544.3 355 77.7
TAR629G2660 Trochodendron aralioides HOM05D001391 ORTHO05D005432 7.1e-153 544.3 355 77.7
QL03p072348 Quercus lobata HOM05D001391 ORTHO05D005432 9.3e-153 543.9 345 79.1
Eucgr.B03154 Eucalyptus grandis HOM05D001391 ORTHO05D005432 1.6e-152 543.1 325 82.8
QL03p071836 Quercus lobata HOM05D001391 ORTHO05D005432 2.7e-152 542.3 338 80.8
Dinv34072 Davidia involucrata HOM05D001391 ORTHO05D005432 6.0e-152 541.2 331 82.2
FvH4_4g30104 Fragaria vesca HOM05D001391 ORTHO05D005432 7.9e-152 540.8 354 78.0
FAN17G2247 Fragaria x ananassa HOM05D001391 ORTHO05D002605 1.0e-151 540.4 370 75.4
Sed0003297 Sechium edule HOM05D001391 ORTHO05D005432 1.3e-151 540.0 356 77.2
HanXRQChr12g0375271 Helianthus annuus HOM05D001391 ORTHO05D005432 1.8e-151 539.7 353 77.6
Manes.01G028100 Manihot esculenta HOM05D001391 ORTHO05D005432 1.8e-151 539.7 347 77.8
MELO3C011425.2 Cucumis melo HOM05D001391 ORTHO05D005432 2.3e-151 539.3 354 77.4
GSVIVG01012214001 Vitis vinifera HOM05D001391 ORTHO05D005432 2.3e-151 539.3 338 79.9
RcHm_v2.0_Chr4g0438441 Rosa chinensis HOM05D001391 ORTHO05D005432 3.9e-151 538.5 349 79.1
Sed0027135 Sechium edule HOM05D001391 ORTHO05D005432 8.7e-151 537.3 349 77.7
MD16G1061600 Malus domestica HOM05D001391 ORTHO05D005432 1.5e-150 536.6 346 78.3
QL03p071994 Quercus lobata HOM05D001391 ORTHO05D005432 1.5e-150 536.6 357 77.0
QL03p072246 Quercus lobata HOM05D001391 ORTHO05D005432 1.9e-150 536.2 381 73.0
BcaB07g30667 Brassica carinata HOM05D001391 ORTHO05D005432 2.5e-150 535.8 357 75.9
FAN07G1596 Fragaria x ananassa HOM05D001391 ORTHO05D005432 5.6e-150 534.6 352 77.3
Ciclev10031905m.g Citrus clementina HOM05D001391 ORTHO05D005432 7.4e-150 534.3 347 77.5
Glyma.20G025600 Glycine max HOM05D001391 ORTHO05D005432 7.4e-150 534.3 345 78.0
Lj4g0006249 Lotus japonicus HOM05D001391 ORTHO05D005432 1.3e-149 533.5 352 77.0
QL06p022506 Quercus lobata HOM05D001391 ORTHO05D005432 1.6e-149 533.1 325 81.5
Actinidia16169 Actinidia chinensis HOM05D001391 ORTHO05D005432 2.1e-149 532.7 320 83.4
THA.LOC104824058 Tarenaya hassleriana HOM05D001391 ORTHO05D005432 3.7e-149 531.9 358 75.1
A09p24460 Brassica napus HOM05D001391 ORTHO05D005432 1.4e-148 530.0 358 75.4
Nitab4.5_0001487g0070 Nicotiana tabacum HOM05D001391 ORTHO05D005432 1.4e-148 530.0 344 79.7
BraA09t38039Z Brassica rapa HOM05D001391 ORTHO05D005432 1.8e-148 529.6 358 75.4
PGR102G1705 Punica granatum HOM05D001391 ORTHO05D005432 1.8e-148 529.6 355 75.8
Prupe.1G286500 Prunus persica HOM05D001391 ORTHO05D005432 2.4e-148 529.3 348 78.7
BcaC04g21485 Brassica carinata HOM05D001391 ORTHO05D005432 3.1e-148 528.9 357 74.8
C09p31260 Brassica napus HOM05D001391 ORTHO05D005432 3.1e-148 528.9 357 74.8
BolC9t55982H Brassica oleracea HOM05D001391 ORTHO05D005432 3.1e-148 528.9 357 74.8
Lsat_1_v5_gn_3_53800 Lactuca sativa HOM05D001391 ORTHO05D005432 4.0e-148 528.5 332 79.8
Ca_18800_v3 Cicer arietinum L. HOM05D001391 ORTHO05D005432 5.3e-148 528.1 351 77.5
AL5G13280 Arabidopsis lyrata HOM05D001391 ORTHO05D005432 6.9e-148 527.7 359 75.2
PSO017G5650 Papaver somniferum HOM05D001391 ORTHO05D005432 1.2e-147 526.9 357 75.4
arahy.Tifrunner.gnm1.ann1.52K398 Arachis hypogaea HOM05D001391 ORTHO05D005432 2.0e-147 526.2 327 80.4
PSO478G1327 Papaver somniferum HOM05D001391 ORTHO05D005432 2.0e-147 526.2 357 75.1
Medtr4g083100 Medicago truncatula HOM05D001391 ORTHO05D005432 2.6e-147 525.8 351 76.9
Sp2g14420 Schrenkiella parvula HOM05D001391 ORTHO05D005432 3.4e-147 525.4 358 74.3
Thhalv10004477m.g Eutrema salsugineum HOM05D001391 ORTHO05D005432 4.5e-147 525.0 357 74.5
Lalb_Chr05g0219941 Lupinus albus HOM05D001391 ORTHO05D005432 5.8e-147 524.6 335 79.7
Psat7g134560 Pisum sativum HOM05D001391 ORTHO05D005432 5.8e-147 524.6 354 76.0
AT2G03510 Arabidopsis thaliana HOM05D001391 ORTHO05D005432 1.3e-146 523.5 359 74.4
THA.LOC104805193 Tarenaya hassleriana HOM05D001391 ORTHO05D005432 1.7e-146 523.1 352 76.7
Carub.0005s0265 Capsella rubella HOM05D001391 ORTHO05D005432 2.2e-146 522.7 359 74.4
COL.COLO4_27891 Corchorus olitorius HOM05D001391 ORTHO05D005432 2.2e-146 522.7 367 73.3
Atru.chr11.1633 Acer truncatum HOM05D001391 ORTHO05D005432 2.9e-146 522.3 357 73.4
arahy.Tifrunner.gnm1.ann1.G55KBL Arachis hypogaea HOM05D001391 ORTHO05D005432 3.8e-146 521.9 318 81.8
CARHR145860 Cardamine hirsuta HOM05D001391 ORTHO05D005432 8.4e-146 520.8 355 74.6
Nitab4.5_0000231g0390 Nicotiana tabacum HOM05D001391 ORTHO05D005432 8.4e-146 520.8 335 80.3
Aa31LG2G7090 Aethionema arabicum HOM05D001391 ORTHO05D005432 1.1e-145 520.4 356 74.7
BcaC03g17224 Brassica carinata HOM05D001391 ORTHO05D005432 7.1e-145 517.7 356 73.9
C02p51560 Brassica napus HOM05D001391 ORTHO05D005432 7.1e-145 517.7 356 73.9
BolC2t11243H Brassica oleracea HOM05D001391 ORTHO05D005432 7.1e-145 517.7 356 73.9
Duzib248G0196 Durio zibethinus HOM05D001391 ORTHO05D005432 7.1e-145 517.7 333 76.6
FAN22G1389 Fragaria x ananassa HOM05D001391 ORTHO05D005432 1.6e-144 516.5 350 76.0
TPR.G34031 Trifolium pratense HOM05D001391 ORTHO05D005432 1.6e-144 516.5 357 73.1
QL03p071709 Quercus lobata HOM05D001391 ORTHO05D005432 2.7e-144 515.8 358 74.3
Ah.02g126880 Amaranthus hybridus HOM05D001391 ORTHO05D005432 6.0e-144 514.6 347 74.9
VMungo0251G0716 Vigna mungo HOM05D001391 ORTHO05D005432 7.9e-144 514.2 375 71.7
DCAR_030039 Daucus carota HOM05D001391 ORTHO05D005432 1.3e-143 513.5 333 78.1
CDE05G0079 Ceratophyllum demersum HOM05D001391 ORTHO05D005432 3.0e-143 512.3 362 72.1
Thecc.02G331500 Theobroma cacao HOM05D001391 ORTHO05D005432 6.7e-143 511.1 317 79.2
Aqoxy3G03632 Aquilegia oxysepala HOM05D001391 ORTHO05D005432 2.5e-142 509.2 334 76.9
MD13G1063100 Malus domestica HOM05D001391 ORTHO05D005432 2.5e-142 509.2 352 74.7
CANSAT64G0915 Cannabis sativa HOM05D001391 ORTHO05D005432 7.4e-142 507.7 323 76.2
unitig_22.g6493 Utricularia gibba HOM05D001391 ORTHO05D005432 1.3e-141 506.9 354 73.4
Zm00001eb393170 Zea mays HOM05D001391 ORTHO05D005432 1.3e-141 506.9 353 74.5
RcHm_v2.0_Chr4g0438461 Rosa chinensis HOM05D001391 ORTHO05D005432 2.2e-141 506.1 329 76.6
AUR62003104 Chenopodium quinoa HOM05D001391 ORTHO05D005432 2.0e-139 499.6 318 78.0
ATR0064G010 Amborella trichopoda HOM05D001391 ORTHO05D005432 1.7e-138 496.5 296 82.1
Migut.L01194 Erythranthe guttata HOM05D001391 ORTHO05D005432 3.8e-138 495.4 327 78.3
EL10Ac6g14993 Beta vulgaris HOM05D001391 ORTHO05D005432 5.0e-138 495.0 308 79.5
Haze_11913 Corylus avellana HOM05D001391 ORTHO05D005432 1.9e-137 493.0 291 83.2
Dinv16729 Davidia involucrata HOM05D001391 ORTHO05D005432 1.9e-137 493.0 298 84.9
Gorai.013G093700 Gossypium raimondii HOM05D001391 ORTHO05D005432 7.9e-136 487.6 344 70.6
PSO478G2440 Papaver somniferum HOM05D001391 ORTHO05D005432 9.7e-134 480.7 326 76.1
CsaV3_6G032550 Cucumis sativus L. HOM05D001391 ORTHO05D005432 1.7e-133 479.9 347 72.3
Gohir.D13G081800 Gossypium hirsutum HOM05D001391 ORTHO05D005432 2.2e-133 479.6 344 69.8
HPP92_020445 Vanilla planifolia HOM05D001391 ORTHO05D005432 8.2e-133 477.6 309 77.3
TAR622G0883 Trochodendron aralioides HOM05D001391 ORTHO05D005432 1.1e-132 477.2 381 68.0
Sabra08G0071900 Salix brachista HOM05D001391 ORTHO05D005432 5.3e-132 474.9 372 70.4
Zm00001eb020150 Zea mays HOM05D001391 ORTHO05D005432 6.9e-132 474.6 353 69.4
Lj6C779T14 Lonicera japonica HOM05D001391 ORTHO05D005432 4.5e-131 471.9 403 64.3
Hund05837 Selenicereus undatus HOM05D001391 ORTHO05D005432 7.7e-131 471.1 309 76.7
QL03p071737 Quercus lobata HOM05D001391 ORTHO05D005432 2.2e-130 469.5 333 73.0
QL03p071961 Quercus lobata HOM05D001391 ORTHO05D005432 2.2e-130 469.5 322 74.5
vmacro01316 Vaccinium macrocarpon HOM05D001391 ORTHO05D005432 3.8e-130 468.8 368 69.0
SMO364G0146 Selaginella moellendorffii HOM05D001391 ORTHO05D005432 3.3e-126 455.7 296 74.7
Pp3c1_8060 Physcomitrium patens HOM05D001391 ORTHO05D005432 7.4e-126 454.5 355 64.2
Pp3c2_37740 Physcomitrium patens HOM05D001391 ORTHO05D005432 2.2e-125 453.0 355 64.8
CsaV3_6G033630 Cucumis sativus L. HOM05D001391 ORTHO05D005432 2.2e-122 443.0 359 66.9
Phvul.002G102100 Phaseolus vulgaris HOM05D001391 ORTHO05D005432 5.0e-122 441.8 300 75.0
AagrBONN_evm.TU.Sc2ySwM_228.3454 Anthoceros agrestis HOM05D001391 ORTHO05D005432 1.9e-121 439.9 315 67.9
ClCG08G010360 Citrullus lanatus HOM05D001391 ORTHO05D005432 5.5e-121 438.3 317 72.2
Glyma.07G225600 Glycine max HOM05D001391 ORTHO05D005432 2.1e-120 436.4 265 81.9
Mapoly0041s0056 Marchantia polymorpha HOM05D001391 ORTHO05D005432 4.7e-120 435.3 318 68.2
Cpa.g.sc1.121 Carica papaya HOM05D001391 ORTHO05D005432 1.5e-118 430.3 353 67.4
CBR_g22084 Chara braunii HOM05D001391 ORTHO05D005432 1.3e-117 427.2 336 64.6
Thhalv10022792m.g Eutrema salsugineum HOM05D001391 ORTHO05D005432 2.2e-117 426.4 354 63.0
Thhalv10022979m.g Eutrema salsugineum HOM05D001391 ORTHO05D005432 2.2e-117 426.4 354 63.0
Nn4g23419 Nelumbo nucifera HOM05D001391 ORTHO05D005432 2.0e-115 419.9 358 65.9
Peaxi162Scf00175g00121 Petunia axillaris HOM05D001391 ORTHO05D005432 3.8e-114 415.6 245 82.4
Solyc05g012340.4 Solanum lycopersicum HOM05D001391 ORTHO05D005432 5.0e-114 415.2 242 86.8
Rhsim12G0074900 Rhododendron simsii HOM05D001391 ORTHO05D005432 1.3e-109 400.6 322 67.7
Sc11g0002420 Simmondsia chinensis HOM05D001391 ORTHO05D005432 1.4e-108 397.1 295 70.2
AUR62007921 Chenopodium quinoa HOM05D001391 ORTHO05D005432 2.7e-107 392.9 319 63.9
Eucgr.B03155 Eucalyptus grandis HOM05D001391 ORTHO05D005432 8.5e-106 387.9 240 78.8
MBI16_g24179_MAGBIO Magnolia biondii HOM05D001391 ORTHO05D005432 4.7e-104 382.1 336 62.2
Thecc.02G331800 Theobroma cacao HOM05D001391 ORTHO05D005432 1.3e-93 347.4 228 72.8
Nn3g17437 Nelumbo nucifera HOM05D001391 ORTHO05D005432 1.6e-91 340.5 358 54.7
CDE02G0606 Ceratophyllum demersum HOM05D001391 ORTHO05D005432 5.9e-91 338.6 207 77.3
Gohir.A13G082200 Gossypium hirsutum HOM05D001391 ORTHO05D005432 2.9e-90 336.3 222 72.5
CSS0036366 Camellia sinensis var. sinensis HOM05D001391 ORTHO05D005432 2.1e-88 330.1 238 73.9
Eucgr.B03159 Eucalyptus grandis HOM05D001391 ORTHO05D005432 6.6e-74 282.0 197 73.6
HanXRQChr08g0223901 Helianthus annuus HOM05D001391 ORTHO05D005432 4.0e-71 272.7 177 79.1
Gohir.D12G164650 Gossypium hirsutum HOM05D001391 ORTHO05D005432 1.1e-68 264.6 262 57.6
Hund25181 Selenicereus undatus HOM05D001391 ORTHO05D005432 2.4e-63 246.9 177 70.1
Gorai.008G177300 Gossypium raimondii HOM05D001391 ORTHO05D005432 3.6e-56 223.0 167 70.7
CSS0025210 Camellia sinensis var. sinensis HOM05D001391 ORTHO05D005432 1.5e-46 191.0 125 75.2
SEGI_41081 Sequoiadendron giganteum HOM05D001391 ORTHO05D005432 2.4e-44 183.7 130 72.3
SEGI_06703 Sequoiadendron giganteum HOM05D001391 ORTHO05D005432 7.9e-43 178.7 130 70.0
SEGI_37700 Sequoiadendron giganteum HOM05D001391 ORTHO05D005432 2.1e-40 170.6 121 70.2
Gorai.008G177400 Gossypium raimondii HOM05D001391 ORTHO05D005432 4.3e-33 146.4 82 78.0
Hma1.2p1_1826F.1_g304410 Hydrangea macrophylla HOM05D001391 ORTHO05D005432 1.4e-31 141.4 125 63.2
QL03p071882 Quercus lobata HOM05D001391 ORTHO05D005432 2.0e-30 137.5 117 66.7
Hund25180 Selenicereus undatus HOM05D001391 ORTHO05D005432 2.6e-30 137.1 97 72.2
QL01p050908 Quercus lobata HOM05D001391 ORTHO05D005432 1.3e-29 134.8 137 54.0
Hma1.2p1_3404F.1_g335810 Hydrangea macrophylla HOM05D001391 ORTHO05D005432 2.2e-29 134.0 118 66.1
Mapoly0004s0019 Marchantia polymorpha HOM05D001391 ORTHO05D005432 2.7e-27 127.1 253 30.0
SEGI_28419 Sequoiadendron giganteum HOM05D001391 ORTHO05D005432 3.1e-23 113.6 86 65.1
Gohir.A13G082366 Gossypium hirsutum HOM05D001391 ORTHO05D005432 3.8e-21 106.7 88 62.5
BcaB07g30295 Brassica carinata HOM05D001391 ORTHO05D005432 2.1e-19 100.9 79 73.4
Os03g0421400 Oryza sativa ssp. japonica HOM05D001391 ORTHO05D005432 4.6e-19 99.8 93 58.1
SEGI_10839 Sequoiadendron giganteum HOM05D001391 ORTHO05D005432 5.1e-18 96.3 86 54.7
SEGI_38290 Sequoiadendron giganteum HOM05D001391 ORTHO05D005432 2.8e-16 90.5 56 67.9
QL01p050911 Quercus lobata HOM05D001391 ORTHO05D005432 5.9e-14 82.8 73 65.8
MD16G1164500 Malus domestica HOM05D001391 ORTHO05D005432 2.2e-13 80.9 43 81.4


User provided reference genes

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