Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold16G07754 Striga asiatica HOM05D006961 ORTHO05D008809 2.5e-104 382.1 194 100.0
SalBow2G3426 Salvia bowleyana HOM05D006961 ORTHO05D008809 2.0e-64 249.6 194 68.6
MSTRG.7764 Avicennia marina HOM05D006961 ORTHO05D008809 1.3e-63 246.9 197 66.5
Dinv34116 Davidia involucrata HOM05D006961 ORTHO05D008809 2.6e-56 222.6 196 62.8
Migut.L01221 Erythranthe guttata HOM05D006961 ORTHO05D008809 2.6e-56 222.6 204 63.7
unitig_22.g6499 Utricularia gibba HOM05D006961 ORTHO05D008809 1.3e-55 220.3 200 59.5
Oeu015341.2 Olea europaea HOM05D006961 ORTHO05D008809 8.3e-55 217.6 239 55.2
TAR622G0866 Trochodendron aralioides HOM05D006961 ORTHO05D008809 2.4e-54 216.1 195 63.6
MELO3C002920.2 Cucumis melo HOM05D006961 ORTHO05D008809 5.4e-54 214.9 182 61.5
Actinidia19920 Actinidia chinensis HOM05D006961 ORTHO05D008809 9.2e-54 214.2 193 61.1
CSS0004568 Camellia sinensis var. sinensis HOM05D006961 ORTHO05D008809 9.2e-54 214.2 202 57.9
Eucgr.G02462 Eucalyptus grandis HOM05D006961 ORTHO05D008809 3.5e-53 212.2 137 75.2
PGR119G1669 Punica granatum HOM05D006961 ORTHO05D008809 3.5e-53 212.2 196 59.2
Medtr5g043580 Medicago truncatula HOM05D006961 ORTHO05D008809 2.3e-52 209.5 121 79.3
TPR.G24476 Trifolium pratense HOM05D006961 ORTHO05D008809 2.3e-52 209.5 121 78.5
Ca_04910_v3 Cicer arietinum L. HOM05D006961 ORTHO05D008809 2.9e-52 209.1 121 78.5
CsaV3_5G025620 Cucumis sativus L. HOM05D006961 ORTHO05D008809 3.8e-52 208.8 155 67.7
vmacro01328 Vaccinium macrocarpon HOM05D006961 ORTHO05D008809 8.6e-52 207.6 128 75.8
arahy.Tifrunner.gnm1.ann1.T2VQ83 Arachis hypogaea HOM05D006961 ORTHO05D008809 1.1e-51 207.2 120 80.0
arahy.Tifrunner.gnm1.ann1.TP0XC6 Arachis hypogaea HOM05D006961 ORTHO05D008809 1.1e-51 207.2 120 80.0
ClCG09G020750 Citrullus lanatus HOM05D006961 ORTHO05D008809 1.1e-51 207.2 124 78.2
Lalb_Chr17g0341001 Lupinus albus HOM05D006961 ORTHO05D008809 1.1e-51 207.2 121 80.2
Cc11_g12360 Coffea canephora HOM05D006961 ORTHO05D008809 1.9e-51 206.5 193 58.0
ECA234G0986 Erigeron canadensis HOM05D006961 ORTHO05D008809 3.3e-51 205.7 132 74.2
Rhsim12G0076500 Rhododendron simsii HOM05D006961 ORTHO05D008809 4.3e-51 205.3 143 69.9
Psat2g128160 Pisum sativum HOM05D006961 ORTHO05D008809 9.5e-51 204.1 121 77.7
CAN.G1340.11 Capsicum annuum HOM05D006961 ORTHO05D008809 1.6e-50 203.4 129 73.6
Glyma.02G113800 Glycine max HOM05D006961 ORTHO05D008809 2.1e-50 203.0 124 75.8
Potri.010G161400 Populus trichocarpa HOM05D006961 ORTHO05D008809 2.1e-50 203.0 184 58.7
VMungo1215G1627 Vigna mungo HOM05D006961 ORTHO05D008809 2.1e-50 203.0 190 57.4
CiPaw.06G090400 Carya illinoinensis HOM05D006961 ORTHO05D008809 3.6e-50 202.2 195 58.5
PGSC0003DMG400028327 Solanum tuberosum HOM05D006961 ORTHO05D008809 3.6e-50 202.2 168 63.1
HanXRQChr12g0379241 Helianthus annuus HOM05D006961 ORTHO05D008809 8.0e-50 201.1 132 73.5
TWI75G1056 Tripterygium wilfordii HOM05D006961 ORTHO05D008809 8.0e-50 201.1 122 77.0
Hma1.2p1_0357F.1_g134450 Hydrangea macrophylla HOM05D006961 ORTHO05D008809 1.0e-49 200.7 209 52.2
Lsat_1_v5_gn_4_10260 Lactuca sativa HOM05D006961 ORTHO05D008809 1.4e-49 200.3 132 71.2
GSVIVG01012179001 Vitis vinifera HOM05D006961 ORTHO05D008809 1.4e-49 200.3 121 78.5
Glyma.01G055400 Glycine max HOM05D006961 ORTHO05D008809 2.3e-49 199.5 124 74.2
Solyc05g012600.3 Solanum lycopersicum HOM05D006961 ORTHO05D008809 2.3e-49 199.5 171 60.2
Sopen05g007430 Solanum pennellii HOM05D006961 ORTHO05D008809 2.3e-49 199.5 167 62.3
Atru.chr11.1688 Acer truncatum HOM05D006961 ORTHO05D008809 4.0e-49 198.7 121 78.5
Lj2g0005939 Lotus japonicus HOM05D006961 ORTHO05D008809 4.0e-49 198.7 119 76.5
DCAR_027451 Daucus carota HOM05D006961 ORTHO05D008809 5.2e-49 198.4 199 53.3
Prupe.1G282200 Prunus persica HOM05D006961 ORTHO05D008809 5.2e-49 198.4 136 70.6
Ciclev10032810m.g Citrus clementina HOM05D006961 ORTHO05D008809 6.8e-49 198.0 181 60.8
RcHm_v2.0_Chr4g0438851 Rosa chinensis HOM05D006961 ORTHO05D008809 6.8e-49 198.0 190 56.8
Nitab4.5_0000334g0230 Nicotiana tabacum HOM05D006961 ORTHO05D008809 8.9e-49 197.6 142 67.6
Peaxi162Scf00314g00025 Petunia axillaris HOM05D006961 ORTHO05D008809 2.6e-48 196.1 141 68.1
Haze_11979 Corylus avellana HOM05D006961 ORTHO05D004702 3.4e-48 195.7 123 75.6
CANSAT64G0471 Cannabis sativa HOM05D006961 ORTHO05D008809 7.5e-48 194.5 180 58.3
QL03p070935 Quercus lobata HOM05D006961 ORTHO05D008809 9.8e-48 194.1 180 55.6
AUR62003136 Chenopodium quinoa HOM05D006961 ORTHO05D008809 1.3e-47 193.7 157 61.1
FAN17G2308 Fragaria x ananassa HOM05D006961 ORTHO05D008809 1.7e-47 193.4 192 54.2
FAN22G0366 Fragaria x ananassa HOM05D006961 ORTHO05D008809 1.7e-47 193.4 192 54.2
Ah.03g139190 Amaranthus hybridus HOM05D006961 ORTHO05D008809 2.2e-47 193.0 163 59.5
Sed0005182 Sechium edule HOM05D006961 ORTHO05D008809 2.2e-47 193.0 124 75.0
FvH4_4g30480 Fragaria vesca HOM05D006961 ORTHO05D008809 2.9e-47 192.6 136 67.6
Hund05862 Selenicereus undatus HOM05D006961 ORTHO05D008809 2.9e-47 192.6 144 65.3
Duzib268G0330 Durio zibethinus HOM05D006961 ORTHO05D008809 3.7e-47 192.2 128 71.1
FAN07G0372 Fragaria x ananassa HOM05D006961 ORTHO05D008809 3.7e-47 192.2 192 54.2
Manes.05G107700 Manihot esculenta HOM05D006961 ORTHO05D008809 4.9e-47 191.8 124 74.2
EL10Ac6g14957 Beta vulgaris HOM05D006961 ORTHO05D008809 6.4e-47 191.4 130 70.0
Thecc.02G336300 Theobroma cacao HOM05D006961 ORTHO05D008809 6.4e-47 191.4 149 65.1
Cfa008905 Carpinus fangiana HOM05D006961 ORTHO05D008809 1.1e-46 190.7 123 74.0
Cpa.g.sc1.93 Carica papaya HOM05D006961 ORTHO05D008809 1.8e-46 189.9 133 71.4
COL.COLO4_27931 Corchorus olitorius HOM05D006961 ORTHO05D008809 2.4e-46 189.5 152 61.8
Gohir.A05G306100 Gossypium hirsutum HOM05D006961 ORTHO05D008809 3.2e-46 189.1 128 69.5
Gohir.D05G306100 Gossypium hirsutum HOM05D006961 ORTHO05D008809 5.4e-46 188.3 126 70.6
MD16G1064700 Malus domestica HOM05D006961 ORTHO05D008809 5.4e-46 188.3 125 72.8
MBI16_g15564_MAGBIO Magnolia biondii HOM05D006961 ORTHO05D008809 1.2e-45 187.2 125 69.6
AUR62007955 Chenopodium quinoa HOM05D006961 ORTHO05D008809 1.6e-45 186.8 156 60.3
PSO478G0730 Papaver somniferum HOM05D006961 ORTHO05D008809 1.6e-45 186.8 124 66.9
PSO017G3353 Papaver somniferum HOM05D006961 ORTHO05D008809 2.0e-45 186.4 184 51.6
Nn3g17372 Nelumbo nucifera HOM05D006961 ORTHO05D008809 3.5e-45 185.7 120 71.7
Lj3A1032T68 Lonicera japonica HOM05D006961 ORTHO05D008809 5.9e-45 184.9 121 73.6
THA.LOC104824066 Tarenaya hassleriana HOM05D006961 ORTHO05D008809 6.6e-44 181.4 122 69.7
Aqoxy3G00448 Aquilegia oxysepala HOM05D006961 ORTHO05D008809 1.1e-43 180.6 119 68.9
Carub.0005s0238 Capsella rubella HOM05D006961 ORTHO05D008809 3.3e-43 179.1 126 69.0
AT2G03420 Arabidopsis thaliana HOM05D006961 ORTHO05D008809 7.3e-43 177.9 126 68.3
AL5G13170 Arabidopsis lyrata HOM05D006961 ORTHO05D008809 9.5e-43 177.6 126 68.3
ATR0111G017 Amborella trichopoda HOM05D006961 ORTHO05D008809 1.2e-42 177.2 120 67.5
CARHR145760 Cardamine hirsuta HOM05D006961 ORTHO05D008809 4.7e-42 175.3 126 67.5
MD13G1065900 Malus domestica HOM05D006961 ORTHO05D008809 4.7e-42 175.3 134 63.4
Thhalv10005024m.g Eutrema salsugineum HOM05D006961 ORTHO05D008809 1.0e-41 174.1 126 65.9
BcaB07g30670 Brassica carinata HOM05D006961 ORTHO05D008809 1.4e-41 173.7 126 65.9
Sp2g14330 Schrenkiella parvula HOM05D006961 ORTHO05D008809 1.4e-41 173.7 139 61.9
BcaC04g21488 Brassica carinata HOM05D006961 ORTHO05D008809 1.8e-41 173.3 126 65.9
A09p24430 Brassica napus HOM05D006961 ORTHO05D008809 1.8e-41 173.3 126 65.9
C09p31220 Brassica napus HOM05D006961 ORTHO05D008809 1.8e-41 173.3 126 65.9
BolC9t55978H Brassica oleracea HOM05D006961 ORTHO05D008809 1.8e-41 173.3 126 65.9
BraA09t38036Z Brassica rapa HOM05D006961 ORTHO05D008809 1.8e-41 173.3 126 65.9
HPP92_023640 Vanilla planifolia HOM05D006961 ORTHO05D008809 1.8e-41 173.3 118 66.9
Aa31LG2G7160 Aethionema arabicum HOM05D006961 ORTHO05D008809 3.1e-41 172.6 123 66.7
Sc04g0007750 Simmondsia chinensis HOM05D006961 ORTHO05D008809 6.8e-41 171.4 100 77.0
CDE07G0364 Ceratophyllum demersum HOM05D006961 ORTHO05D008809 1.7e-39 166.8 120 64.2
A02p33440 Brassica napus HOM05D006961 ORTHO05D008809 2.2e-39 166.4 127 63.8
Zm00001eb400470 Zea mays HOM05D006961 ORTHO05D008809 2.4e-38 162.9 134 59.0
CDE04G0363 Ceratophyllum demersum HOM05D006961 ORTHO05D008809 1.7e-36 156.8 118 61.9
SEGI_13566 Sequoiadendron giganteum HOM05D006961 ORTHO05D008809 4.7e-34 148.7 120 57.5
HPP92_023624 Vanilla planifolia HOM05D006961 ORTHO05D008809 4.0e-33 145.6 96 68.8
BcaC03g17213 Brassica carinata HOM05D006961 ORTHO05D008809 1.7e-28 130.2 95 67.4
C02p51430 Brassica napus HOM05D006961 ORTHO05D008809 1.7e-28 130.2 95 67.4
BolC2t11231H Brassica oleracea HOM05D006961 ORTHO05D008809 1.7e-28 130.2 95 67.4
Actinidia31945 Actinidia chinensis HOM05D006961 ORTHO05D008809 2.8e-26 122.9 152 49.3
Mapoly0047s0086 Marchantia polymorpha HOM05D006961 ORTHO05D008809 2.2e-23 113.2 121 45.5
AagrBONN_evm.TU.Sc2ySwM_228.3757 Anthoceros agrestis HOM05D006961 ORTHO05D008809 3.8e-23 112.5 121 47.9
Gorai.009G326100 Gossypium raimondii HOM05D006961 ORTHO05D008809 1.4e-22 110.5 85 67.1
Zm00001eb176890 Zea mays HOM05D006961 ORTHO05D008809 5.4e-22 108.6 160 41.2
Pp3c5_22460 Physcomitrium patens HOM05D006961 ORTHO05D008809 1.6e-21 107.1 120 45.8
SalBow2G3119 Salvia bowleyana HOM05D006961 ORTHO05D008809 2.7e-21 106.3 70 74.3
SMO356G0726 Selaginella moellendorffii HOM05D006961 ORTHO05D008809 2.5e-19 99.8 121 43.0
CBR_g50745 Chara braunii HOM05D006961 ORTHO05D008809 2.9e-15 86.3 114 39.5
FAN12G0580 Fragaria x ananassa HOM05D006961 ORTHO05D008809 4.2e-14 82.4 50 68.0
Cre02.g114450 Chlamydomonas reinhardtii HOM05D006961 ORTHO05D008809 5.3e-09 65.5 158 32.3
Os03g0210700 Oryza sativa ssp. japonica HOM05D006961 ORTHO05D008809 2.6e-08 63.2 48 56.2


User provided reference genes

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