Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold16G07752 Striga asiatica HOM05D002318 ORTHO05D008744 3.2e-159 565.1 292 100.0
Migut.L01223 Erythranthe guttata HOM05D002318 ORTHO05D008744 2.0e-113 412.9 335 63.9
SalBow2G2755 Salvia bowleyana HOM05D002318 ORTHO05D008744 4.5e-105 385.2 334 59.9
Oeu021096.1 Olea europaea HOM05D002318 ORTHO05D008744 2.5e-103 379.4 335 59.4
Lsat_1_v5_gn_8_48101 Lactuca sativa HOM05D002318 ORTHO05D004713 3.4e-92 342.4 316 55.7
PGSC0003DMG401028329 Solanum tuberosum HOM05D002318 ORTHO05D008744 4.4e-92 342.0 334 55.1
PGSC0003DMG402022110 Solanum tuberosum HOM05D002318 ORTHO05D008744 4.4e-92 342.0 334 55.1
Sopen05g007450 Solanum pennellii HOM05D002318 ORTHO05D008744 1.7e-91 340.1 334 54.8
Nitab4.5_0000334g0260 Nicotiana tabacum HOM05D002318 ORTHO05D008744 8.3e-91 337.8 331 55.3
Peaxi162Scf00314g00023 Petunia axillaris HOM05D002318 ORTHO05D008744 1.2e-89 334.0 372 51.9
CAN.G1340.13 Capsicum annuum HOM05D002318 ORTHO05D008744 2.2e-88 329.7 332 54.2
Solyc05g012620.4 Solanum lycopersicum HOM05D002318 ORTHO05D008744 5.0e-88 328.6 268 61.6
HanXRQChr12g0362851 Helianthus annuus HOM05D002318 ORTHO05D008744 8.5e-88 327.8 275 59.6
Cc11_g12380 Coffea canephora HOM05D002318 ORTHO05D008744 1.9e-87 326.6 331 53.8
Eucgr.G02464 Eucalyptus grandis HOM05D002318 ORTHO05D008744 3.2e-87 325.9 283 58.3
MBI16_g06774_MAGBIO Magnolia biondii HOM05D002318 ORTHO05D008744 1.2e-86 323.9 275 60.4
TAR622G0636 Trochodendron aralioides HOM05D002318 ORTHO05D004713 8.0e-86 321.2 266 61.3
VMungo1215G2584 Vigna mungo HOM05D002318 ORTHO05D008744 8.0e-86 321.2 296 57.1
CiPaw.05G128000 Carya illinoinensis HOM05D002318 ORTHO05D008744 1.0e-85 320.9 276 59.8
Thecc.02G336500 Theobroma cacao HOM05D002318 ORTHO05D008744 1.8e-85 320.1 332 53.3
Atru.chr11.1690 Acer truncatum HOM05D002318 ORTHO05D008744 8.8e-85 317.8 302 55.3
Glyma.02G113500 Glycine max HOM05D002318 ORTHO05D008744 8.8e-85 317.8 292 57.5
Lj2g0021077 Lotus japonicus HOM05D002318 ORTHO05D008744 8.8e-85 317.8 299 55.9
Haze_11934 Corylus avellana HOM05D002318 ORTHO05D008744 1.2e-84 317.4 275 58.9
Cfa008908 Carpinus fangiana HOM05D002318 ORTHO05D008744 2.0e-84 316.6 268 60.8
Potri.010G161600 Populus trichocarpa HOM05D002318 ORTHO05D008744 2.0e-84 316.6 278 58.6
Lalb_Chr17g0340981 Lupinus albus HOM05D002318 ORTHO05D008744 2.6e-84 316.2 274 58.8
QL03p070830 Quercus lobata HOM05D002318 ORTHO05D008744 3.4e-84 315.8 273 59.0
Phvul.002G069400 Phaseolus vulgaris HOM05D002318 ORTHO05D008744 5.7e-84 315.1 312 53.2
MD16G1064900 Malus domestica HOM05D002318 ORTHO05D008744 7.5e-84 314.7 279 57.7
Sc11g0002270 Simmondsia chinensis HOM05D002318 ORTHO05D008744 9.8e-84 314.3 275 57.5
COL.COLO4_27936 Corchorus olitorius HOM05D002318 ORTHO05D008744 1.3e-83 313.9 333 53.2
RcHm_v2.0_Chr4g0438871 Rosa chinensis HOM05D002318 ORTHO05D008744 2.2e-83 313.2 278 58.3
THA.LOC104805183 Tarenaya hassleriana HOM05D002318 ORTHO05D008744 2.8e-83 312.8 293 56.0
unitig_22.g6902 Utricularia gibba HOM05D002318 ORTHO05D008744 3.7e-83 312.4 323 53.6
Sp2g14310 Schrenkiella parvula HOM05D002318 ORTHO05D008744 6.3e-83 311.6 270 59.3
Duzib268G0798 Durio zibethinus HOM05D002318 ORTHO05D008744 8.3e-83 311.2 279 57.7
Thhalv10004578m.g Eutrema salsugineum HOM05D002318 ORTHO05D008744 8.3e-83 311.2 272 58.8
Ciclev10032054m.g Citrus clementina HOM05D002318 ORTHO05D008744 1.8e-82 310.1 267 62.2
Hund05860 Selenicereus undatus HOM05D002318 ORTHO05D008744 1.8e-82 310.1 276 56.9
AUR62043182 Chenopodium quinoa HOM05D002318 ORTHO05D008744 7.0e-82 308.1 270 58.9
TWI75G0802 Tripterygium wilfordii HOM05D002318 ORTHO05D008744 1.2e-81 307.4 273 58.6
arahy.Tifrunner.gnm1.ann1.T5ZGHX Arachis hypogaea HOM05D002318 ORTHO05D008744 1.6e-81 307.0 278 57.2
CANSAT54G0184 Cannabis sativa HOM05D002318 ORTHO05D008744 2.0e-81 306.6 265 57.7
Sabra10G0122900 Salix brachista HOM05D002318 ORTHO05D008744 2.0e-81 306.6 278 57.6
CARHR145730 Cardamine hirsuta HOM05D002318 ORTHO05D008744 2.7e-81 306.2 270 57.8
FAN07G2980 Fragaria x ananassa HOM05D002318 ORTHO05D004713 2.7e-81 306.2 270 58.5
Gorai.013G091200 Gossypium raimondii HOM05D002318 ORTHO05D008744 2.7e-81 306.2 279 57.0
TPR.G22412 Trifolium pratense HOM05D002318 ORTHO05D008744 3.5e-81 305.8 313 52.4
BcaC06g34000 Brassica carinata HOM05D002318 ORTHO05D008744 4.5e-81 305.4 272 57.4
arahy.Tifrunner.gnm1.ann1.T0481B Arachis hypogaea HOM05D002318 ORTHO05D008744 5.9e-81 305.1 278 56.8
PGR119G0925 Punica granatum HOM05D002318 ORTHO05D008744 5.9e-81 305.1 314 50.0
Psat2g128360 Pisum sativum HOM05D002318 ORTHO05D008744 1.0e-80 304.3 331 52.6
BraA06t27203Z Brassica rapa HOM05D002318 ORTHO05D008744 1.3e-80 303.9 304 53.9
Gohir.A13G079900 Gossypium hirsutum HOM05D002318 ORTHO05D008744 1.7e-80 303.5 279 56.6
FAN22G0051 Fragaria x ananassa HOM05D002318 ORTHO05D008744 2.3e-80 303.1 270 58.1
vmacro01330 Vaccinium macrocarpon HOM05D002318 ORTHO05D008744 2.3e-80 303.1 340 48.8
C07p33850 Brassica napus HOM05D002318 ORTHO05D008744 5.0e-80 302.0 274 57.3
Cpa.g.sc1.87 Carica papaya HOM05D002318 ORTHO05D008744 5.0e-80 302.0 280 57.1
Ah.13g073950 Amaranthus hybridus HOM05D002318 ORTHO05D008744 1.1e-79 300.8 328 49.7
AL5G13100 Arabidopsis lyrata HOM05D002318 ORTHO05D008744 1.1e-79 300.8 272 55.5
AL5G13140 Arabidopsis lyrata HOM05D002318 ORTHO05D008744 1.1e-79 300.8 272 55.5
Carub.0005s0236 Capsella rubella HOM05D002318 ORTHO05D008744 1.1e-79 300.8 272 55.5
GSVIVG01012177001 Vitis vinifera HOM05D002318 ORTHO05D008744 1.1e-79 300.8 283 57.2
AT2G03390 Arabidopsis thaliana HOM05D002318 ORTHO05D008744 1.5e-79 300.4 272 56.6
BolC7t43899H Brassica oleracea HOM05D002318 ORTHO05D008744 1.5e-79 300.4 274 56.9
MELO3C011434.2 Cucumis melo HOM05D002318 ORTHO05D008744 3.3e-79 299.3 294 52.7
Rhsim12G0076700 Rhododendron simsii HOM05D002318 ORTHO05D008744 4.3e-79 298.9 308 51.9
ATR0111G011 Amborella trichopoda HOM05D002318 ORTHO05D008744 5.6e-79 298.5 267 57.7
CSS0013540 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D008744 5.6e-79 298.5 258 60.5
ECA233G4874 Erigeron canadensis HOM05D002318 ORTHO05D008744 5.6e-79 298.5 265 59.6
FAN17G2010 Fragaria x ananassa HOM05D002318 ORTHO05D008744 2.8e-78 296.2 281 56.2
BcaC06g31184 Brassica carinata HOM05D002318 ORTHO05D008744 4.7e-78 295.4 273 56.4
Aqoxy3G03551 Aquilegia oxysepala HOM05D002318 ORTHO05D008744 8.0e-78 294.7 274 55.1
DCAR_027449 Daucus carota HOM05D002318 ORTHO05D008744 8.0e-78 294.7 263 56.3
Ca_04907_v3 Cicer arietinum L. HOM05D002318 ORTHO05D008744 1.0e-77 294.3 274 56.2
Actinidia19922 Actinidia chinensis HOM05D002318 ORTHO05D008744 1.8e-77 293.5 333 49.8
CsaV3_6G032440 Cucumis sativus L. HOM05D002318 ORTHO05D008744 3.0e-77 292.7 288 52.8
Aa31LG2G7170 Aethionema arabicum HOM05D002318 ORTHO05D008744 3.4e-76 289.3 303 52.1
Gohir.D13G079700 Gossypium hirsutum HOM05D002318 ORTHO05D008744 1.7e-75 287.0 260 57.3
Medtr5g043480 Medicago truncatula HOM05D002318 ORTHO05D008744 4.9e-75 285.4 300 52.0
CDE04G0061 Ceratophyllum demersum HOM05D002318 ORTHO05D008744 6.4e-75 285.0 305 50.8
ClCG08G010240 Citrullus lanatus HOM05D002318 ORTHO05D008744 1.4e-74 283.9 337 46.6
EL10As3g23350 Beta vulgaris HOM05D002318 ORTHO05D008744 2.0e-73 280.0 316 49.1
FAN12G0082 Fragaria x ananassa HOM05D002318 ORTHO05D008744 2.0e-73 280.0 270 55.6
AUR62038089 Chenopodium quinoa HOM05D002318 ORTHO05D008744 5.9e-73 278.5 296 51.4
Os08g0172200 Oryza sativa ssp. japonica HOM05D002318 ORTHO05D008744 1.0e-69 267.7 265 52.5
SEGI_16280 Sequoiadendron giganteum HOM05D002318 ORTHO05D008744 2.6e-68 263.1 267 52.4
Lj6C782T15 Lonicera japonica HOM05D002318 ORTHO05D008744 1.4e-66 257.3 232 56.9
Hma1.2p1_0354F.1_g133650 Hydrangea macrophylla HOM05D002318 ORTHO05D008744 1.3e-64 250.8 285 49.8
Actinidia31948 Actinidia chinensis HOM05D002318 ORTHO05D008744 3.0e-64 249.6 234 55.6
Nn3g17371 Nelumbo nucifera HOM05D002318 ORTHO05D008744 1.6e-62 243.8 229 56.3
Prupe.1G282000 Prunus persica HOM05D002318 ORTHO05D008744 1.6e-62 243.8 266 50.8
Mapoly0001s0530 Marchantia polymorpha HOM05D002318 ORTHO05D008744 1.1e-61 241.1 244 49.2
Dinv34114 Davidia involucrata HOM05D002318 ORTHO05D008744 2.9e-59 233.0 215 58.1
Pp3c7_3960 Physcomitrium patens HOM05D002318 ORTHO05D008744 3.2e-58 229.6 249 45.8
Manes.01G030400 Manihot esculenta HOM05D002318 ORTHO05D008744 7.1e-58 228.4 227 55.5
A06p43150 Brassica napus HOM05D002318 ORTHO05D008744 2.3e-56 223.4 259 49.8
AagrBONN_evm.TU.Sc2ySwM_117.1985 Anthoceros agrestis HOM05D002318 ORTHO05D008744 1.1e-53 214.5 288 40.3
FvH4_4g30500 Fragaria vesca HOM05D002318 ORTHO05D008744 2.3e-53 213.4 215 53.5
Sed0004708 Sechium edule HOM05D002318 ORTHO05D008744 4.6e-49 199.1 213 49.8
CSS0032009 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D008744 1.6e-46 190.7 150 62.7
Dinv16705 Davidia involucrata HOM05D002318 ORTHO05D004713 3.4e-44 183.0 222 50.9
SMO115G0105 Selaginella moellendorffii HOM05D002318 ORTHO05D008744 1.7e-43 180.6 203 45.8
CBR_g27967 Chara braunii HOM05D002318 ORTHO05D008744 7.1e-42 175.3 251 37.8
PSO591G0040 Papaver somniferum HOM05D002318 ORTHO05D008744 9.3e-42 174.9 193 47.7
FAN16G1553 Fragaria x ananassa HOM05D002318 ORTHO05D008744 4.5e-36 156.0 120 62.5
CSS0007300 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D008744 1.8e-32 144.1 216 45.8
Cre02.g113700 Chlamydomonas reinhardtii HOM05D002318 ORTHO05D008744 4.0e-29 132.9 285 32.3
Glyma.01G055000 Glycine max HOM05D002318 ORTHO05D008744 6.9e-29 132.1 185 46.5
arahy.Tifrunner.gnm1.ann1.1U2S5X Arachis hypogaea HOM05D002318 ORTHO05D008744 2.6e-28 130.2 171 46.2
arahy.Tifrunner.gnm1.ann1.TF58FW Arachis hypogaea HOM05D002318 ORTHO05D008744 5.8e-28 129.0 171 46.2
PRCOL_00000845 Prasinoderma coloniale HOM05D002318 ORTHO05D008744 2.9e-27 126.7 254 30.3
Zm00001eb370310 Zea mays HOM05D002318 ORTHO05D008744 1.0e-19 101.7 153 39.9
Glyma.01G054950 Glycine max HOM05D002318 ORTHO05D008744 3.5e-17 93.2 58 70.7
Aa31sc734G30 Aethionema arabicum HOM05D002318 ORTHO05D008744 4.3e-15 86.3 111 46.8
CBR_g50304 Chara braunii HOM05D020303 ORTHO05D021299 4.1e-13 79.7 183 30.6
Os01g0764500 Oryza sativa ssp. japonica HOM05D002318 ORTHO05D008744 1.5e-12 77.8 61 60.7
arahy.Tifrunner.gnm1.ann1.QV9UMR Arachis hypogaea HOM05D000001 ORTHO05D000003 6.1e-09 65.9 37 73.0
Cfa025736 Carpinus fangiana HOM05D020303 ORTHO05D021299 2.5e-07 60.5 70 44.3
SGA_v2.0_scaffold90G27967 Striga asiatica HOM05D007596 ORTHO05D009672 4.3e-07 59.7 79 46.8


User provided reference genes

Program Settings