Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold16G07742 Striga asiatica HOM05D007053 ORTHO05D008922 2.3e-190 668.7 329 100.0
Migut.L01233 Erythranthe guttata HOM05D007053 ORTHO05D008922 1.2e-122 443.7 364 65.1
MSTRG.7772 Avicennia marina HOM05D007053 ORTHO05D008922 6.0e-122 441.4 354 66.9
Dinv16695 Davidia involucrata HOM05D007053 ORTHO05D008922 9.3e-107 391.0 366 58.7
COL.COLO4_27954 Corchorus olitorius HOM05D007053 ORTHO05D008922 1.1e-104 384.0 323 63.2
GSVIVG01001339001 Vitis vinifera HOM05D007053 ORTHO05D008922 3.3e-104 382.5 362 58.6
Sopen04g001540 Solanum pennellii HOM05D007053 ORTHO05D008922 5.6e-104 381.7 346 59.8
Manes.01G031400 Manihot esculenta HOM05D007053 ORTHO05D008922 7.3e-104 381.3 346 59.8
Potri.010G162900 Populus trichocarpa HOM05D007053 ORTHO05D008922 9.6e-104 380.9 345 58.3
Solyc04g005520.3 Solanum lycopersicum HOM05D007053 ORTHO05D008922 1.3e-103 380.6 346 59.8
PGR102G0611 Punica granatum HOM05D007053 ORTHO05D008922 2.1e-103 379.8 351 59.3
CSS0045311 Camellia sinensis var. sinensis HOM05D007053 ORTHO05D008922 6.2e-103 378.3 369 56.4
Nn4g23303 Nelumbo nucifera HOM05D007053 ORTHO05D008922 1.1e-102 377.5 358 58.4
Sabra10G0123900 Salix brachista HOM05D007053 ORTHO05D008922 1.4e-102 377.1 345 58.6
TAR629G2828 Trochodendron aralioides HOM05D007053 ORTHO05D008922 2.4e-102 376.3 368 57.1
CSS0030124 Camellia sinensis var. sinensis HOM05D007053 ORTHO05D008922 4.0e-102 375.6 369 55.8
Aqoxy3G03518 Aquilegia oxysepala HOM05D007053 ORTHO05D008922 6.9e-102 374.8 351 58.7
FvH4_4g30620 Fragaria vesca HOM05D007053 ORTHO05D008922 6.9e-102 374.8 344 59.0
Atru.chr11.1705 Acer truncatum HOM05D007053 ORTHO05D008922 9.0e-102 374.4 342 59.1
PGSC0003DMG400002850 Solanum tuberosum HOM05D007053 ORTHO05D008922 2.0e-101 373.2 357 58.0
FAN22G2353 Fragaria x ananassa HOM05D007053 ORTHO05D008922 7.6e-101 371.3 348 58.0
FAN07G1757 Fragaria x ananassa HOM05D007053 ORTHO05D008922 9.9e-101 370.9 348 58.0
FAN22G1358 Fragaria x ananassa HOM05D007053 ORTHO05D008922 9.9e-101 370.9 348 58.0
Cc11_g12440 Coffea canephora HOM05D007053 ORTHO05D008922 6.4e-100 368.2 362 55.2
CiPaw.06G089300 Carya illinoinensis HOM05D007053 ORTHO05D008922 1.1e-99 367.5 347 57.6
Cfa008919 Carpinus fangiana HOM05D007053 ORTHO05D008922 2.4e-99 366.3 351 58.1
CAN.G765.42 Capsicum annuum HOM05D007053 ORTHO05D008922 4.2e-99 365.5 337 59.3
Lsat_1_v5_gn_8_46861 Lactuca sativa HOM05D007053 ORTHO05D008922 7.1e-99 364.8 345 57.7
Gorai.013G090300 Gossypium raimondii HOM05D007053 ORTHO05D008922 2.1e-98 363.2 350 56.9
HanXRQChr08g0211061 Helianthus annuus HOM05D007053 ORTHO05D008922 2.7e-98 362.8 346 57.5
FAN17G2706 Fragaria x ananassa HOM05D007053 ORTHO05D008922 3.5e-98 362.5 348 57.5
Gohir.A13G079000 Gossypium hirsutum HOM05D007053 ORTHO05D008922 3.5e-98 362.5 350 56.6
Sc04g0007810 Simmondsia chinensis HOM05D007053 ORTHO05D008922 4.6e-98 362.1 345 56.8
RcHm_v2.0_Chr4g0439031 Rosa chinensis HOM05D007053 ORTHO05D008922 1.3e-97 360.5 348 56.3
Lj3A1033T59 Lonicera japonica HOM05D007053 ORTHO05D008922 3.9e-97 359.0 369 54.7
Duzib248G0053 Durio zibethinus HOM05D007053 ORTHO05D008922 6.7e-97 358.2 350 55.1
Rhsim12G0133300 Rhododendron simsii HOM05D007053 ORTHO05D008922 1.5e-96 357.1 359 55.4
Actinidia33234 Actinidia chinensis HOM05D007053 ORTHO05D008922 1.9e-96 356.7 359 55.7
AL1G39090 Arabidopsis lyrata HOM05D007053 ORTHO05D008922 1.9e-96 356.7 350 54.6
Ca_04893_v3 Cicer arietinum L. HOM05D007053 ORTHO05D008922 3.3e-96 355.9 348 56.9
Eucgr.B03188 Eucalyptus grandis HOM05D007053 ORTHO05D008922 3.3e-96 355.9 365 55.9
Ciclev10031995m.g Citrus clementina HOM05D007053 ORTHO05D008922 4.3e-96 355.5 354 56.2
QL03p069977 Quercus lobata HOM05D007053 ORTHO05D008922 4.3e-96 355.5 351 56.4
ClCG09G022040 Citrullus lanatus HOM05D007053 ORTHO05D008922 5.6e-96 355.1 357 55.7
MD13G1067400 Malus domestica HOM05D007053 ORTHO05D008922 5.6e-96 355.1 367 54.0
TPR.G19934 Trifolium pratense HOM05D007053 ORTHO05D008922 9.6e-96 354.4 360 55.0
Lj2g0014226 Lotus japonicus HOM05D007053 ORTHO05D008922 1.3e-95 354.0 368 54.6
PSO063G7037 Papaver somniferum HOM05D007053 ORTHO05D008922 1.3e-95 354.0 357 55.2
Carub.0001s2439 Capsella rubella HOM05D007053 ORTHO05D008922 1.6e-95 353.6 350 54.6
Thhalv10008165m.g Eutrema salsugineum HOM05D007053 ORTHO05D008922 1.6e-95 353.6 355 54.4
ECA233G1809 Erigeron canadensis HOM05D007053 ORTHO05D008922 2.1e-95 353.2 347 57.1
Nitab4.5_0011225g0030 Nicotiana tabacum HOM05D007053 ORTHO05D008922 2.8e-95 352.8 320 60.6
Oeu021091.2 Olea europaea HOM05D007053 ORTHO05D008922 3.7e-95 352.4 375 53.9
AUR62005859 Chenopodium quinoa HOM05D007053 ORTHO05D008922 4.8e-95 352.1 365 53.2
Psat2g127520 Pisum sativum HOM05D007053 ORTHO05D008922 4.8e-95 352.1 362 55.2
Glyma.02G112200 Glycine max HOM05D007053 ORTHO05D008922 6.2e-95 351.7 363 54.8
Sp1g22160 Schrenkiella parvula HOM05D007053 ORTHO05D008922 8.1e-95 351.3 355 53.8
AT1G26640 Arabidopsis thaliana HOM05D007053 ORTHO05D008922 1.1e-94 350.9 352 54.0
Lalb_Chr10g0098501 Lupinus albus HOM05D007053 ORTHO05D008922 1.4e-94 350.5 348 57.2
PSO063G1507 Papaver somniferum HOM05D007053 ORTHO05D008922 3.1e-94 349.4 358 55.0
Thecc.02G338500 Theobroma cacao HOM05D007053 ORTHO05D008922 3.1e-94 349.4 349 54.7
MELO3C002980.2 Cucumis melo HOM05D007053 ORTHO05D008922 5.3e-94 348.6 348 56.0
CARHR025330 Cardamine hirsuta HOM05D007053 ORTHO05D008922 1.5e-93 347.1 356 53.7
C05p24370 Brassica napus HOM05D007053 ORTHO05D008922 2.6e-93 346.3 352 53.7
Medtr5g042980 Medicago truncatula HOM05D007053 ORTHO05D008922 3.4e-93 345.9 348 55.7
Phvul.002G091000 Phaseolus vulgaris HOM05D007053 ORTHO05D008922 3.4e-93 345.9 357 55.5
BolC5t31171H Brassica oleracea HOM05D007053 ORTHO05D008922 4.5e-93 345.5 352 53.4
Hund06137 Selenicereus undatus HOM05D007053 ORTHO05D008922 4.5e-93 345.5 346 55.2
Sed0004632 Sechium edule HOM05D007053 ORTHO05D008922 5.8e-93 345.1 349 55.0
A09p40050 Brassica napus HOM05D007053 ORTHO05D008922 1.7e-92 343.6 355 53.0
BcaC05g26403 Brassica carinata HOM05D007053 ORTHO05D008922 2.2e-92 343.2 352 53.4
THA.LOC104808621 Tarenaya hassleriana HOM05D007053 ORTHO05D008922 3.8e-92 342.4 349 53.6
BraA09t39501Z Brassica rapa HOM05D007053 ORTHO05D008922 1.4e-91 340.5 353 53.0
VMungo1215G2121 Vigna mungo HOM05D007053 ORTHO05D008922 2.4e-91 339.7 353 54.7
Aa31LG7G8460 Aethionema arabicum HOM05D007053 ORTHO05D008922 3.2e-91 339.3 355 53.0
CANSAT64G1913 Cannabis sativa HOM05D007053 ORTHO05D008922 3.5e-90 335.9 349 54.4
Peaxi162Scf00187g00127 Petunia axillaris HOM05D007053 ORTHO05D008922 4.6e-90 335.5 347 53.6
arahy.Tifrunner.gnm1.ann1.8N8AS7 Arachis hypogaea HOM05D007053 ORTHO05D008922 6.0e-90 335.1 349 54.4
EL10Ac6g13278 Beta vulgaris HOM05D007053 ORTHO05D008922 1.3e-89 334.0 341 54.8
Nitab4.5_0000014g0210 Nicotiana tabacum HOM05D007053 ORTHO05D008922 3.9e-89 332.4 268 65.7
Haze_11947 Corylus avellana HOM05D007053 ORTHO05D008922 1.5e-88 330.5 343 55.1
AUR62032851 Chenopodium quinoa HOM05D007053 ORTHO05D008922 2.4e-86 323.2 326 55.2
ATR0730G101 Amborella trichopoda HOM05D007053 ORTHO05D008922 3.4e-85 319.3 341 52.5
FAN12G2464 Fragaria x ananassa HOM05D007053 ORTHO05D008922 1.2e-82 310.8 304 55.6
unitig_699.g19912 Utricularia gibba HOM05D007053 ORTHO05D008922 3.5e-82 309.3 336 53.6
Ah.02g129320 Amaranthus hybridus HOM05D007053 ORTHO05D008922 1.8e-81 307.0 374 49.7
TWI79G1311 Tripterygium wilfordii HOM05D007053 ORTHO05D008922 8.7e-81 304.7 341 51.6
CsaV3_5G025100 Cucumis sativus L. HOM05D007053 ORTHO05D008922 5.9e-77 292.0 299 54.2
Zm00001eb370300 Zea mays HOM05D007053 ORTHO05D008922 3.8e-76 289.3 356 49.2
Prupe.1G280800 Prunus persica HOM05D007053 ORTHO05D008922 1.4e-75 287.3 347 47.8
vmacro16354 Vaccinium macrocarpon HOM05D007053 ORTHO05D008922 2.4e-70 270.0 448 39.7
Pp3c3_35320 Physcomitrium patens HOM05D007053 ORTHO05D008922 4.7e-66 255.8 355 43.9
SMO116G0352 Selaginella moellendorffii HOM05D007053 ORTHO05D008922 1.5e-61 240.7 343 43.7
DCAR_030987 Daucus carota HOM05D007053 ORTHO05D008922 4.2e-59 232.6 187 64.7
Mapoly0180s0007 Marchantia polymorpha HOM05D007053 ORTHO05D008922 5.2e-57 225.7 348 40.8
MBI19_g40191_MAGBIO Magnolia biondii HOM05D007053 ORTHO05D008922 1.6e-53 214.2 222 54.1
QL03p070004 Quercus lobata HOM05D007053 ORTHO05D008922 1.0e-52 211.5 261 47.1
arahy.Tifrunner.gnm1.ann1.L47GGJ Arachis hypogaea HOM05D007053 ORTHO05D008922 5.9e-45 185.7 170 58.2
Pp3c8_2060 Physcomitrium patens HOM05D007053 ORTHO05D008922 1.7e-44 184.1 177 55.9
AagrBONN_evm.TU.Sc2ySwM_228.2378 Anthoceros agrestis HOM05D007053 ORTHO05D008922 6.5e-44 182.2 322 39.1
CDE02G3282 Ceratophyllum demersum HOM05D007053 ORTHO05D008922 1.5e-43 181.0 180 54.4
CDE02G3739 Ceratophyllum demersum HOM05D007053 ORTHO05D008922 1.6e-34 151.0 136 56.6
CBR_g29893 Chara braunii HOM05D007053 ORTHO05D008922 1.0e-33 148.3 360 33.9
Cre13.g579800 Chlamydomonas reinhardtii HOM05D007053 ORTHO05D008922 3.0e-33 146.7 300 34.0
FAN17G3123 Fragaria x ananassa HOM05D007053 ORTHO05D008922 5.9e-29 132.5 98 67.3
SEGI_12600 Sequoiadendron giganteum HOM05D007053 ORTHO05D008922 3.2e-22 110.2 123 48.8
SEGI_13989 Sequoiadendron giganteum HOM05D007053 ORTHO05D008922 4.6e-13 79.7 75 56.0
Lsat_1_v5_gn_1_96520 Lactuca sativa HOM05D007053 ORTHO05D008922 4.3e-11 73.2 49 71.4
Lsat_1_v5_gn_5_96721 Lactuca sativa HOM05D007053 ORTHO05D008922 9.5e-11 72.0 51 60.8
Os01g0764600 Oryza sativa ssp. japonica HOM05D007053 ORTHO05D008922 1.3e-07 61.6 83 47.0
MCO04G110 Micromonas commoda HOM05D007053 ORTHO05D008922 1.7e-07 61.2 187 30.5
AL2G14220 Arabidopsis lyrata HOM05D011085 ORTHO05D031413 1.1e-06 58.5 77 41.6


User provided reference genes

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