Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold16G07657 Striga asiatica HOM05D007416 ORTHO05D009329 1.9e-83 312.4 151 100.0
SGA_v2.0_scaffold309G48156 Striga asiatica HOM05D007416 ORTHO05D009329 6.9e-49 197.6 122 82.0
Migut.M01088 Erythranthe guttata HOM05D007416 ORTHO05D009329 8.7e-44 180.6 121 76.0
Oeu012170.1 Olea europaea HOM05D007416 ORTHO05D009329 6.3e-34 147.9 122 63.9
PGSC0003DMG400022819 Solanum tuberosum HOM05D007416 ORTHO05D009329 2.4e-33 146.0 118 67.8
Solyc10g008850.2 Solanum lycopersicum HOM05D007416 ORTHO05D009329 2.9e-31 139.0 119 63.9
Sopen10g004640 Solanum pennellii HOM05D007416 ORTHO05D009329 2.9e-31 139.0 119 63.9
unitig_8.g4657 Utricularia gibba HOM05D004204 ORTHO05D005069 4.2e-30 135.2 104 66.3
CAN.G361.15 Capsicum annuum HOM05D007416 ORTHO05D009329 7.2e-30 134.4 105 65.7
Dinv17369 Davidia involucrata HOM05D007416 ORTHO05D009329 7.2e-30 134.4 89 68.5
Peaxi162Scf00248g00011 Petunia axillaris HOM05D007416 ORTHO05D009329 1.2e-29 133.7 132 56.1
Cc02_g14200 Coffea canephora HOM05D007416 ORTHO05D009329 3.6e-29 132.1 87 69.0
unitig_8.g4633 Utricularia gibba HOM05D007416 ORTHO05D009329 7.9e-29 131.0 100 67.0
unitig_8.g4637 Utricularia gibba HOM05D007416 ORTHO05D009329 7.9e-29 131.0 100 67.0
Nitab4.5_0014582g0020 Nicotiana tabacum HOM05D007416 ORTHO05D009329 1.4e-28 130.2 128 55.5
Nitab4.5_0002114g0110 Nicotiana tabacum HOM05D007416 ORTHO05D009329 1.8e-28 129.8 120 60.8
CSS0002821 Camellia sinensis var. sinensis HOM05D007416 ORTHO05D009329 8.8e-28 127.5 62 88.7
Manes.17G051100 Manihot esculenta HOM05D007416 ORTHO05D009329 1.5e-27 126.7 110 61.8
CANSAT35G0095 Cannabis sativa HOM05D007416 ORTHO05D009329 2.6e-27 125.9 74 77.0
Atru.chr10.1755 Acer truncatum HOM05D007416 ORTHO05D009329 4.4e-27 125.2 99 63.6
ECA234G4626 Erigeron canadensis HOM05D007416 ORTHO05D009329 4.4e-27 125.2 98 65.3
Haze_06330 Corylus avellana HOM05D007416 ORTHO05D009329 7.4e-27 124.4 87 70.1
Nn1g06362 Nelumbo nucifera HOM05D007416 ORTHO05D009329 9.7e-27 124.0 60 86.7
SalBow8G2036 Salvia bowleyana HOM05D007416 ORTHO05D009329 9.7e-27 124.0 120 57.5
CiPaw.10G054100 Carya illinoinensis HOM05D007416 ORTHO05D009329 2.2e-26 122.9 107 61.7
Hma1.2p1_1465F.1_g285370 Hydrangea macrophylla HOM05D007416 ORTHO05D009329 2.2e-26 122.9 66 78.8
TWI38G0960 Tripterygium wilfordii HOM05D007416 ORTHO05D009329 4.8e-26 121.7 91 67.0
Ah.09g237760 Amaranthus hybridus HOM05D007416 ORTHO05D009329 6.3e-26 121.3 98 61.2
Aqoxy1G02242 Aquilegia oxysepala HOM05D007416 ORTHO05D009329 8.2e-26 120.9 100 61.0
MELO3C007245.2 Cucumis melo HOM05D007416 ORTHO05D009329 1.1e-25 120.6 71 77.5
Potri.004G051300 Populus trichocarpa HOM05D007416 ORTHO05D009329 1.1e-25 120.6 114 59.6
Sc17g0005840 Simmondsia chinensis HOM05D007416 ORTHO05D009329 1.1e-25 120.6 110 59.1
COL.COLO4_31395 Corchorus olitorius HOM05D007416 ORTHO05D009329 1.4e-25 120.2 99 62.6
Lsat_1_v5_gn_1_119080 Lactuca sativa HOM05D007416 ORTHO05D009329 1.4e-25 120.2 86 68.6
Sed0002237 Sechium edule HOM05D007416 ORTHO05D009329 1.4e-25 120.2 71 74.6
TWI63G0778 Tripterygium wilfordii HOM05D007416 ORTHO05D009329 1.8e-25 119.8 111 55.0
ClCG01G023400 Citrullus lanatus HOM05D007416 ORTHO05D009329 2.4e-25 119.4 106 63.2
Prupe.4G055000 Prunus persica HOM05D007416 ORTHO05D009329 3.1e-25 119.0 103 60.2
Cpa.g.sc7.10 Carica papaya HOM05D007416 ORTHO05D009329 4.1e-25 118.6 67 76.1
AUR62031108 Chenopodium quinoa HOM05D007416 ORTHO05D009329 4.1e-25 118.6 130 50.8
CDE05G1837 Ceratophyllum demersum HOM05D007416 ORTHO05D009329 6.9e-25 117.9 60 83.3
CsaV3_6G050530 Cucumis sativus L. HOM05D007416 ORTHO05D009329 1.2e-24 117.1 107 59.8
HanXRQChr14g0454031 Helianthus annuus HOM05D007416 ORTHO05D009329 1.2e-24 117.1 83 65.1
AT1G28540 Arabidopsis thaliana HOM05D007416 ORTHO05D009329 1.5e-24 116.7 81 66.7
Cfa000548 Carpinus fangiana HOM05D007416 ORTHO05D009329 1.5e-24 116.7 99 61.6
TAR627G0809 Trochodendron aralioides HOM05D003433 ORTHO05D003921 1.5e-24 116.7 82 67.1
Ciclev10017211m.g Citrus clementina HOM05D007416 ORTHO05D009329 2.0e-24 116.3 114 55.3
Carub.0001s2700 Capsella rubella HOM05D007416 ORTHO05D009329 4.5e-24 115.2 85 65.9
FvH4_3g08330 Fragaria vesca HOM05D007416 ORTHO05D009329 4.5e-24 115.2 61 82.0
FAN16G3750 Fragaria x ananassa HOM05D007416 ORTHO05D009329 4.5e-24 115.2 61 82.0
THA.LOC104812624 Tarenaya hassleriana HOM05D007416 ORTHO05D009329 4.5e-24 115.2 100 59.0
AUR62014900 Chenopodium quinoa HOM05D007416 ORTHO05D009329 7.7e-24 114.4 117 55.6
Lj6g0009243 Lotus japonicus HOM05D007416 ORTHO05D009329 7.7e-24 114.4 70 72.9
CARHR028020 Cardamine hirsuta HOM05D007416 ORTHO05D009329 1.0e-23 114.0 100 57.0
FAN21G3844 Fragaria x ananassa HOM05D007416 ORTHO05D009329 1.0e-23 114.0 61 80.3
Gohir.A02G025200 Gossypium hirsutum HOM05D007416 ORTHO05D009329 1.0e-23 114.0 104 58.7
PSO675G1239 Papaver somniferum HOM05D007416 ORTHO05D009329 1.0e-23 114.0 72 69.4
VMungo0540G0454 Vigna mungo HOM05D007416 ORTHO05D009329 1.0e-23 114.0 68 72.1
A08p25450 Brassica napus HOM05D007416 ORTHO05D009329 1.3e-23 113.6 66 75.8
AL1G42170 Arabidopsis lyrata HOM05D007416 ORTHO05D009329 1.7e-23 113.2 100 59.0
BraA08t34496Z Brassica rapa HOM05D007416 ORTHO05D009329 1.7e-23 113.2 61 80.3
Gohir.D02G032400 Gossypium hirsutum HOM05D007416 ORTHO05D009329 1.7e-23 113.2 94 62.8
Gorai.005G035900 Gossypium raimondii HOM05D007416 ORTHO05D009329 1.7e-23 113.2 94 62.8
Psat1g201280 Pisum sativum HOM05D007416 ORTHO05D009329 1.7e-23 113.2 94 58.5
Thecc.06G178300 Theobroma cacao HOM05D007416 ORTHO05D009329 2.2e-23 112.8 103 59.2
FAN25G0684 Fragaria x ananassa HOM05D007416 ORTHO05D009329 2.9e-23 112.5 60 81.7
Os06g0524500 Oryza sativa ssp. japonica HOM05D007416 ORTHO05D009329 2.9e-23 112.5 66 72.7
Thhalv10009143m.g Eutrema salsugineum HOM05D007416 ORTHO05D009329 3.8e-23 112.1 98 58.2
Lalb_Chr20g0121431 Lupinus albus HOM05D007416 ORTHO05D009329 6.5e-23 111.3 82 62.2
C07p16790 Brassica napus HOM05D007416 ORTHO05D009329 1.1e-22 110.5 95 61.1
PGR004G2353 Punica granatum HOM05D007416 ORTHO05D009329 1.1e-22 110.5 83 62.7
Glyma.13G152576 Glycine max HOM05D007416 ORTHO05D009329 1.4e-22 110.2 61 80.3
BcaC01g00068 Brassica carinata HOM05D007416 ORTHO05D009329 1.9e-22 109.8 99 57.6
Os06g0525000 Oryza sativa ssp. japonica HOM05D007416 ORTHO05D009329 1.9e-22 109.8 69 69.6
Actinidia07614 Actinidia chinensis HOM05D007416 ORTHO05D009329 2.5e-22 109.4 110 50.9
QL05p043606 Quercus lobata HOM05D007416 ORTHO05D009329 2.5e-22 109.4 101 58.4
RcHm_v2.0_Chr5g0009671 Rosa chinensis HOM05D007416 ORTHO05D009329 2.5e-22 109.4 91 62.6
BcaB03g12097 Brassica carinata HOM05D007416 ORTHO05D009329 3.2e-22 109.0 100 58.0
Sp1g24790 Schrenkiella parvula HOM05D007416 ORTHO05D009329 3.2e-22 109.0 93 60.2
Phvul.006G180100 Phaseolus vulgaris HOM05D007416 ORTHO05D009329 4.2e-22 108.6 110 57.3
Eucgr.D00578 Eucalyptus grandis HOM05D007416 ORTHO05D009329 5.5e-22 108.2 103 51.5
C03p75360 Brassica napus HOM05D007416 ORTHO05D009329 7.2e-22 107.8 97 56.7
BraA07t28904Z Brassica rapa HOM05D007416 ORTHO05D009329 9.4e-22 107.5 95 60.0
arahy.Tifrunner.gnm1.ann1.46W2M6 Arachis hypogaea HOM05D007416 ORTHO05D009329 1.2e-21 107.1 59 72.9
arahy.Tifrunner.gnm1.ann1.96U62E Arachis hypogaea HOM05D007416 ORTHO05D009329 1.2e-21 107.1 59 72.9
BolC3t19794H Brassica oleracea HOM05D007416 ORTHO05D009329 1.2e-21 107.1 94 58.5
Ca_00403_v3 Cicer arietinum L. HOM05D007416 ORTHO05D009329 1.2e-21 107.1 92 59.8
MD10G1286700 Malus domestica HOM05D007416 ORTHO05D009329 1.2e-21 107.1 93 63.4
Aa31LG6G11050 Aethionema arabicum HOM05D007416 ORTHO05D009329 1.6e-21 106.7 59 74.6
EL10Ac8g20461 Beta vulgaris HOM05D007416 ORTHO05D009329 2.7e-21 105.9 81 64.2
HPP92_008637 Vanilla planifolia HOM05D007416 ORTHO05D009329 4.7e-21 105.1 71 62.0
TPR.G11747 Trifolium pratense HOM05D007416 ORTHO05D009329 6.1e-21 104.8 95 57.9
TPR.G39540 Trifolium pratense HOM05D007416 ORTHO05D009329 6.1e-21 104.8 95 57.9
HPP92_005210 Vanilla planifolia HOM05D007416 ORTHO05D009329 1.8e-20 103.2 94 55.3
BolC7t42186H Brassica oleracea HOM05D007416 ORTHO05D009329 8.8e-20 100.9 90 60.0
Rhsim02G0137800 Rhododendron simsii HOM05D007416 ORTHO05D009329 2.0e-19 99.8 89 56.2
Medtr2g014970 Medicago truncatula HOM05D007416 ORTHO05D009329 2.6e-19 99.4 90 56.7
FAN11G0205 Fragaria x ananassa HOM05D007416 ORTHO05D009329 2.2e-18 96.3 50 82.0
Mapoly0016s0097 Marchantia polymorpha HOM05D007416 ORTHO05D009329 7.0e-17 91.3 91 52.7
AUR62031107 Chenopodium quinoa HOM05D007416 ORTHO05D009329 2.6e-16 89.4 65 58.5
Pp3c24_10110 Physcomitrium patens HOM05D007416 ORTHO05D009329 2.9e-15 85.9 60 58.3
A07p11140 Brassica napus HOM05D007416 ORTHO05D009329 1.4e-12 77.0 80 53.8
AagrBONN_evm.TU.Sc2ySwM_362.2610 Anthoceros agrestis HOM05D007416 ORTHO05D009329 5.7e-11 71.6 83 45.8
Zm00001eb194760 Zea mays HOM05D007416 ORTHO05D009329 2.5e-06 56.2 63 44.4


User provided reference genes

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