Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold16G07655 Striga asiatica HOM05D006452 ORTHO05D008068 0.0e+00 1228.8 639 100.0
Migut.M01092 Erythranthe guttata HOM05D006452 ORTHO05D008068 2.6e-198 696.0 636 58.6
SalBow8G3895 Salvia bowleyana HOM05D006452 ORTHO05D008068 1.0e-186 657.5 657 55.7
Oeu001094.1 Olea europaea HOM05D006452 ORTHO05D008068 5.0e-173 612.1 605 53.2
Hma1.2p1_1465F.1_g285350 Hydrangea macrophylla HOM05D006452 ORTHO05D008068 1.3e-157 560.8 554 54.0
Lj1A1199G43 Lonicera japonica HOM05D006452 ORTHO05D008068 2.9e-157 559.7 584 52.7
Nitab4.5_0001375g0100 Nicotiana tabacum HOM05D006452 ORTHO05D008068 6.5e-157 558.5 635 49.8
PGSC0003DMG400012819 Solanum tuberosum HOM05D006452 ORTHO05D008068 4.0e-154 549.3 571 50.8
Nitab4.5_0000516g0020 Nicotiana tabacum HOM05D006452 ORTHO05D008068 6.7e-154 548.5 624 49.0
CSS0041533 Camellia sinensis var. sinensis HOM05D006452 ORTHO05D008068 2.8e-152 543.1 635 47.4
Actinidia39488 Actinidia chinensis HOM05D006452 ORTHO05D008068 1.8e-151 540.4 631 47.5
Ciclev10014636m.g Citrus clementina HOM05D006452 ORTHO05D008068 1.6e-150 537.3 606 47.4
Sopen03g002290 Solanum pennellii HOM05D006452 ORTHO05D008068 2.7e-150 536.6 572 50.2
unitig_8.g4630 Utricularia gibba HOM05D006452 ORTHO05D008068 3.2e-148 529.6 572 49.0
Nn1g06365 Nelumbo nucifera HOM05D006452 ORTHO05D008068 5.5e-148 528.9 581 49.1
Sabra04G0032100 Salix brachista HOM05D006452 ORTHO05D008068 3.6e-147 526.2 631 46.0
TAR629G0815 Trochodendron aralioides HOM05D006452 ORTHO05D008068 8.0e-147 525.0 576 47.9
QL05p043485 Quercus lobata HOM05D006452 ORTHO05D008068 1.8e-146 523.9 619 46.7
CiPaw.09G065500 Carya illinoinensis HOM05D006452 ORTHO05D008068 1.5e-145 520.8 627 45.6
GSVIVG01021140001 Vitis vinifera HOM05D006452 ORTHO05D008068 1.5e-145 520.8 637 47.4
Gohir.A06G134400 Gossypium hirsutum HOM05D006452 ORTHO05D008068 2.2e-144 516.9 607 46.6
Gorai.010G157000 Gossypium raimondii HOM05D006452 ORTHO05D008068 2.8e-144 516.5 607 46.8
RcHm_v2.0_Chr5g0009531 Rosa chinensis HOM05D006452 ORTHO05D008068 1.8e-143 513.8 571 48.7
Cfa000544 Carpinus fangiana HOM05D006452 ORTHO05D008068 2.4e-143 513.5 614 45.1
MD05G1308100 Malus domestica HOM05D006452 ORTHO05D008068 3.1e-143 513.1 570 48.1
Duzib235G0445 Durio zibethinus HOM05D006452 ORTHO05D008068 9.1e-143 511.5 634 45.1
FvH4_3g08370 Fragaria vesca HOM05D006452 ORTHO05D008068 9.1e-143 511.5 571 47.8
Thecc.06G178700 Theobroma cacao HOM05D006452 ORTHO05D008068 9.1e-143 511.5 634 45.3
Gohir.D06G135100 Gossypium hirsutum HOM05D006452 ORTHO05D008068 1.2e-142 511.1 608 46.7
CANSAT35G2027 Cannabis sativa HOM05D006452 ORTHO05D008068 1.7e-141 507.3 628 44.6
Cc00_g07720 Coffea canephora HOM05D006452 ORTHO05D008068 2.2e-141 506.9 609 45.8
Phvul.006G180500 Phaseolus vulgaris HOM05D006452 ORTHO05D008068 4.7e-139 499.2 569 48.3
AUR62031101 Chenopodium quinoa HOM05D006452 ORTHO05D008068 6.1e-139 498.8 564 47.3
AUR62014896 Chenopodium quinoa HOM05D006452 ORTHO05D008068 2.3e-138 496.9 572 47.4
Glyma.13G152304 Glycine max HOM05D006452 ORTHO05D008068 2.3e-138 496.9 568 46.7
Medtr2g014890 Medicago truncatula HOM05D006452 ORTHO05D008068 3.0e-138 496.5 550 47.5
Lj6g0021964 Lotus japonicus HOM05D006452 ORTHO05D008068 5.2e-138 495.7 569 48.0
Manes.17G051000 Manihot esculenta HOM05D006452 ORTHO05D008068 5.2e-138 495.7 622 43.9
Glyma.10G069100 Glycine max HOM05D006452 ORTHO05D008068 6.8e-138 495.4 568 47.4
HanXRQChr16g0518591 Helianthus annuus HOM05D006452 ORTHO05D008068 3.4e-137 493.0 634 45.6
ECA234G2428 Erigeron canadensis HOM05D006452 ORTHO05D008068 4.4e-137 492.7 556 48.0
BcaC01g00067 Brassica carinata HOM05D006452 ORTHO05D008068 7.5e-137 491.9 626 45.4
ClCG01G023380 Citrullus lanatus HOM05D006452 ORTHO05D008068 2.2e-136 490.3 610 43.6
Lsat_1_v5_gn_4_51620 Lactuca sativa HOM05D006452 ORTHO05D008068 2.8e-136 490.0 558 47.5
Aqoxy4G00567 Aquilegia oxysepala HOM05D006452 ORTHO05D008068 3.7e-136 489.6 646 43.3
MELO3C007247.2 Cucumis melo HOM05D006452 ORTHO05D008068 4.9e-136 489.2 578 45.2
VMungo0540G0818 Vigna mungo HOM05D006452 ORTHO05D008068 6.3e-136 488.8 569 47.8
Rhsim02G0137400 Rhododendron simsii HOM05D006452 ORTHO05D008068 1.4e-135 487.6 664 44.3
arahy.Tifrunner.gnm1.ann1.FLUH97 Arachis hypogaea HOM05D006452 ORTHO05D008068 2.4e-135 486.9 569 45.9
Ca_00397_v3 Cicer arietinum L. HOM05D006452 ORTHO05D008068 2.4e-135 486.9 569 46.7
Prupe.4G054700 Prunus persica HOM05D006452 ORTHO05D008068 1.6e-134 484.2 562 47.0
TWI38G0383 Tripterygium wilfordii HOM05D006452 ORTHO05D008068 1.6e-134 484.2 624 43.8
C03p75340 Brassica napus HOM05D006452 ORTHO05D008068 2.0e-134 483.8 627 45.1
BolC3t19793H Brassica oleracea HOM05D006452 ORTHO05D008068 5.9e-134 482.3 627 44.8
A08p25460 Brassica napus HOM05D006452 ORTHO05D008068 1.3e-133 481.1 626 44.9
COL.COLO4_31396 Corchorus olitorius HOM05D006452 ORTHO05D008068 3.8e-133 479.6 596 45.8
EL10Ac8g20457 Beta vulgaris HOM05D006452 ORTHO05D008068 3.3e-132 476.5 603 43.4
BraA08t34497Z Brassica rapa HOM05D006452 ORTHO05D008068 7.3e-132 475.3 622 44.7
AL1G42150 Arabidopsis lyrata HOM05D006452 ORTHO05D008068 9.5e-132 474.9 575 46.3
THA.LOC104812622 Tarenaya hassleriana HOM05D006452 ORTHO05D008068 9.5e-132 474.9 573 46.2
Carub.0001s2699 Capsella rubella HOM05D006452 ORTHO05D008068 1.6e-131 474.2 570 47.0
AT1G28530 Arabidopsis thaliana HOM05D006452 ORTHO05D008068 2.1e-131 473.8 572 47.0
arahy.Tifrunner.gnm1.ann1.228Z0R Arachis hypogaea HOM05D006452 ORTHO05D008068 3.6e-131 473.0 569 45.2
Thhalv10007091m.g Eutrema salsugineum HOM05D006452 ORTHO05D008068 3.6e-131 473.0 571 47.1
Lalb_Chr18g0059351 Lupinus albus HOM05D006452 ORTHO05D008068 6.1e-131 472.2 568 44.9
PSO832G2664 Papaver somniferum HOM05D006452 ORTHO05D008068 8.0e-131 471.9 708 39.4
Sp1g24780 Schrenkiella parvula HOM05D006452 ORTHO05D008068 8.0e-131 471.9 570 46.0
BcaB03g12098 Brassica carinata HOM05D006452 ORTHO05D008068 2.6e-129 466.8 625 43.4
CARHR028010 Cardamine hirsuta HOM05D006452 ORTHO05D008068 1.3e-128 464.5 571 46.4
FAN25G3335 Fragaria x ananassa HOM05D006452 ORTHO05D008068 2.9e-128 463.4 568 44.9
PSO210G4080 Papaver somniferum HOM05D006452 ORTHO05D008068 3.2e-127 459.9 708 38.8
Solyc03g006280.4 Solanum lycopersicum HOM05D006452 ORTHO05D008068 5.0e-125 452.6 571 46.1
Atru.chr10.1767 Acer truncatum HOM05D006452 ORTHO05D008068 4.0e-122 443.0 532 44.4
FAN11G3013 Fragaria x ananassa HOM05D006452 ORTHO05D008068 8.9e-122 441.8 566 44.3
FAN21G3590 Fragaria x ananassa HOM05D006452 ORTHO05D008068 8.9e-122 441.8 572 43.7
Dinv40619 Davidia involucrata HOM05D006452 ORTHO05D008068 3.7e-120 436.4 449 49.9
Aa31LG6G11040 Aethionema arabicum HOM05D006452 ORTHO05D008068 4.6e-118 429.5 669 40.1
Haze_06337 Corylus avellana HOM05D006452 ORTHO05D008068 1.7e-112 411.0 658 37.5
ATR0602G160 Amborella trichopoda HOM05D006452 ORTHO05D008068 5.6e-108 396.0 596 38.6
MBI07_g32549_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 1.2e-107 394.8 506 43.9
Sed0012413 Sechium edule HOM05D006452 ORTHO05D008068 1.6e-107 394.4 457 43.3
Hma1.2p1_1465F.1_g285340 Hydrangea macrophylla HOM05D006452 ORTHO05D008068 2.1e-107 394.0 417 52.5
DCAR_006579 Daucus carota HOM05D006452 ORTHO05D008068 6.2e-107 392.5 624 40.4
HPP92_000497 Vanilla planifolia HOM05D006452 ORTHO05D008068 3.0e-101 373.6 569 39.0
Potri.004G051000 Populus trichocarpa HOM05D006452 ORTHO05D008068 3.9e-101 373.2 419 45.3
FAN16G3312 Fragaria x ananassa HOM05D006452 ORTHO05D008068 1.5e-100 371.3 419 45.6
CAN.G189.65 Capsicum annuum HOM05D006452 ORTHO05D008068 9.6e-100 368.6 467 44.5
Sc17g0005860 Simmondsia chinensis HOM05D006452 ORTHO05D008068 5.2e-98 362.8 638 37.9
TPR.G11703 Trifolium pratense HOM05D006452 ORTHO05D008068 3.4e-97 360.1 427 45.4
Peaxi162Scf01018g00215 Petunia axillaris HOM05D006452 ORTHO05D008068 5.8e-97 359.4 576 40.1
PGR004G2109 Punica granatum HOM05D006452 ORTHO05D008068 4.9e-96 356.3 390 49.5
Cpa.g.sc7.8 Carica papaya HOM05D006452 ORTHO05D008068 1.1e-95 355.1 444 45.7
CsaV3_6G050510 Cucumis sativus L. HOM05D006452 ORTHO05D008068 5.6e-92 342.8 418 42.1
CDE10G0189 Ceratophyllum demersum HOM05D006452 ORTHO05D008068 9.6e-92 342.0 493 39.4
Eucgr.D00580 Eucalyptus grandis HOM05D006452 ORTHO05D008068 1.1e-90 338.6 388 47.2
vmacro15945 Vaccinium macrocarpon HOM05D006452 ORTHO05D008068 4.5e-89 333.2 409 46.9
Os02g0109900 Oryza sativa ssp. japonica HOM05D006452 ORTHO05D008068 9.9e-89 332.0 586 36.0
Psat1g201640 Pisum sativum HOM05D006452 ORTHO05D008068 1.1e-87 328.6 339 50.4
Hund23835 Selenicereus undatus HOM05D006452 ORTHO05D008068 2.1e-86 324.3 419 42.5
Zm00001eb229620 Zea mays HOM05D006452 ORTHO05D008068 7.4e-84 315.8 579 34.0
MBI07_g06446_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 1.1e-74 285.4 645 31.0
CAN.G1286.36 Capsicum annuum HOM05D006452 ORTHO05D008068 1.4e-58 231.9 297 43.4
Mapoly0052s0014 Marchantia polymorpha HOM05D006452 ORTHO05D008068 2.0e-57 228.0 577 29.1
CAN.G801.36 Capsicum annuum HOM05D006452 ORTHO05D008068 5.5e-47 193.4 245 42.4
AagrBONN_evm.TU.Sc2ySwM_228.5590 Anthoceros agrestis HOM05D006452 ORTHO05D008068 9.1e-42 176.0 606 26.9
unitig_8.g4641 Utricularia gibba HOM05D006452 ORTHO05D008068 2.2e-40 171.4 160 53.1
TPR.G10795 Trifolium pratense HOM05D006452 ORTHO05D008068 9.4e-39 166.0 212 44.8
vmacro15946 Vaccinium macrocarpon HOM05D006452 ORTHO05D008068 2.6e-36 157.9 203 44.8
Psat1g201600 Pisum sativum HOM05D006452 ORTHO05D008068 7.5e-36 156.4 200 44.5
Lsat_1_v5_gn_9_9480 Lactuca sativa HOM05D006452 ORTHO05D008068 1.3e-32 145.6 218 38.1
SEGI_16257 Sequoiadendron giganteum HOM05D006452 ORTHO05D008068 1.3e-27 129.0 301 30.9
CDE10G0511 Ceratophyllum demersum HOM05D002520 ORTHO05D003144 2.4e-18 98.2 89 59.6
Pp3c17_22050 Physcomitrium patens HOM05D006452 ORTHO05D008068 2.0e-17 95.1 323 29.1
SEGI_13408 Sequoiadendron giganteum HOM05D006452 ORTHO05D008068 1.5e-15 89.0 206 29.1
CAN.G638.7 Capsicum annuum HOM05D006452 ORTHO05D008068 2.8e-14 84.7 190 33.7
Peaxi162Scf01018g00213 Petunia axillaris HOM05D006452 ORTHO05D008068 1.2e-12 79.3 68 57.4
MBI15_g20021_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 2.2e-11 75.1 66 57.6
BcaC01g06820 Brassica carinata HOM05D006452 ORTHO05D008068 3.2e-10 71.2 84 48.8
MBI05_g40582_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D029689 8.0e-06 56.6 70 45.7
MBI05_g44052_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 8.0e-06 56.6 70 45.7


User provided reference genes

Program Settings