Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold16G07649 Striga asiatica HOM05D009288 ORTHO05D011444 3.8e-197 691.4 373 100.0
SGA_v2.0_scaffold309G48159 Striga asiatica HOM05D009288 ORTHO05D011444 1.6e-118 430.3 373 64.1
Migut.M01095 Erythranthe guttata HOM05D009288 ORTHO05D011444 1.1e-108 397.5 390 55.6
MSTRG.15840 Avicennia marina HOM05D009288 ORTHO05D011444 8.6e-101 371.3 391 54.5
MSTRG.7368 Avicennia marina HOM05D009288 ORTHO05D011444 2.6e-97 359.8 392 54.6
Oeu001096.1 Olea europaea HOM05D009288 ORTHO05D011444 5.8e-97 358.6 391 52.7
Migut.H01464 Erythranthe guttata HOM05D009288 ORTHO05D011444 1.6e-94 350.5 379 52.8
Oeu012164.1 Olea europaea HOM05D009288 ORTHO05D011444 4.4e-89 332.4 400 51.2
SalBow8G2277 Salvia bowleyana HOM05D009288 ORTHO05D011444 1.7e-88 330.5 375 50.4
Cc02_g14100 Coffea canephora HOM05D009288 ORTHO05D011444 1.9e-87 327.0 402 47.8
SalBow7G2427 Salvia bowleyana HOM05D009288 ORTHO05D011444 9.6e-84 314.7 376 48.9
CAN.G79.87 Capsicum annuum HOM05D009288 ORTHO05D011444 4.7e-83 312.4 228 65.4
Peaxi162Scf00697g00054 Petunia axillaris HOM05D009288 ORTHO05D011444 1.1e-82 311.2 457 42.2
Nitab4.5_0005016g0020 Nicotiana tabacum HOM05D009288 ORTHO05D000173 1.8e-82 310.5 228 65.8
PGSC0003DMG400031772 Solanum tuberosum HOM05D009288 ORTHO05D011444 2.4e-82 310.1 440 43.4
Sopen02g022400 Solanum pennellii HOM05D009288 ORTHO05D011444 9.0e-82 308.1 437 43.5
SalBow7G0267 Salvia bowleyana HOM05D009288 ORTHO05D011444 2.2e-80 303.5 376 47.9
Peaxi162Scf00490g00074 Petunia axillaris HOM05D009288 ORTHO05D011444 2.7e-78 296.6 228 64.0
DCAR_004037 Daucus carota HOM05D009288 ORTHO05D011444 1.0e-77 294.7 386 46.6
Nitab4.5_0002114g0180 Nicotiana tabacum HOM05D009288 ORTHO05D011444 1.3e-77 294.3 444 42.1
Nitab4.5_0005043g0050 Nicotiana tabacum HOM05D009288 ORTHO05D011444 1.1e-76 291.2 226 63.3
DCAR_028039 Daucus carota HOM05D009288 ORTHO05D011444 2.4e-74 283.5 394 43.7
Sopen10g004710 Solanum pennellii HOM05D009288 ORTHO05D011444 4.0e-74 282.7 447 40.0
PGSC0003DMG400022835 Solanum tuberosum HOM05D009288 ORTHO05D011444 5.3e-74 282.3 439 40.1
Rhsim13G0181100 Rhododendron simsii HOM05D009288 ORTHO05D011444 2.6e-73 280.0 370 44.6
Solyc10g008920.1 Solanum lycopersicum HOM05D009288 ORTHO05D011444 2.6e-73 280.0 447 39.4
CAN.G1876.1 Capsicum annuum HOM05D009288 ORTHO05D011444 2.7e-70 270.0 228 57.9
CSS0036897 Camellia sinensis var. sinensis HOM05D009288 ORTHO05D011444 3.3e-68 263.1 370 43.2
Actinidia16578 Actinidia chinensis HOM05D001211 ORTHO05D001084 7.4e-68 261.9 216 56.5
Dinv17366 Davidia involucrata HOM05D009288 ORTHO05D011444 8.1e-67 258.5 192 63.0
vmacro03898 Vaccinium macrocarpon HOM05D000288 ORTHO05D011444 1.1e-66 258.1 226 54.9
Hma1.2p1_0608F.1_g188330 Hydrangea macrophylla HOM05D009288 ORTHO05D011444 3.4e-65 253.1 376 43.4
Nitab4.5_0008221g0030 Nicotiana tabacum HOM05D000288 ORTHO05D011444 3.4e-65 253.1 191 63.4
Solyc02g077490.3 Solanum lycopersicum HOM05D009288 ORTHO05D011444 2.9e-64 250.0 168 66.7
Hma1.2p1_1465F.1_g285290 Hydrangea macrophylla HOM05D009288 ORTHO05D011444 1.0e-40 171.8 307 38.8
Actinidia05663 Actinidia chinensis HOM05D000288 ORTHO05D000173 4.8e-19 99.8 74 59.5
QL03p014248 Quercus lobata HOM05D008582 ORTHO05D010200 6.3e-11 72.8 149 30.9
COL.COLO4_12929 Corchorus olitorius HOM05D008582 ORTHO05D010200 2.3e-08 64.3 148 30.4
Nn8g39916 Nelumbo nucifera HOM05D000886 ORTHO05D000525 6.6e-08 62.8 156 28.8
QL03p015301 Quercus lobata HOM05D008582 ORTHO05D010200 8.6e-08 62.4 174 28.7
Rhsim04G0069800 Rhododendron simsii HOM05D000886 ORTHO05D000525 1.5e-07 61.6 147 32.0
QL03p015386 Quercus lobata HOM05D008582 ORTHO05D010200 2.5e-07 60.8 208 27.4
COL.COLO4_12937 Corchorus olitorius HOM05D008582 ORTHO05D010200 7.2e-07 59.3 159 30.2
QL03p015391 Quercus lobata HOM05D008582 ORTHO05D010200 7.2e-07 59.3 114 29.8
Gohir.A11G245100 Gossypium hirsutum HOM05D000886 ORTHO05D000525 1.2e-06 58.5 109 35.8
Ciclev10003144m.g Citrus clementina HOM05D008582 ORTHO05D010200 2.8e-06 57.4 162 28.4


User provided reference genes

Program Settings