Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold16G07641 Striga asiatica HOM05D000170 ORTHO05D404313 2.5e-154 548.9 313 100.0
SGA_v2.0_scaffold44G16851 Striga asiatica HOM05D000170 ORTHO05D000159 4.8e-12 76.3 49 75.5
MSTRG.8604 Avicennia marina HOM05D000170 ORTHO05D000159 1.1e-08 65.1 48 68.8
MSTRG.26971 Avicennia marina HOM05D000170 ORTHO05D000159 3.2e-08 63.5 48 66.7
vmacro10164 Vaccinium macrocarpon HOM05D000170 ORTHO05D000159 7.2e-08 62.4 48 64.6
Cc02_g00760 Coffea canephora HOM05D000170 ORTHO05D000159 9.4e-08 62.0 48 62.5
Migut.F00144 Erythranthe guttata HOM05D000170 ORTHO05D000159 1.2e-07 61.6 48 64.6
Rhsim09G0210100 Rhododendron simsii HOM05D000170 ORTHO05D000159 1.2e-07 61.6 46 65.2
CSS0048493 Camellia sinensis var. sinensis HOM05D000170 ORTHO05D000159 1.6e-07 61.2 48 62.5
Ciclev10005230m.g Citrus clementina HOM05D000170 ORTHO05D000159 2.1e-07 60.8 48 58.3
CAN.G303.27 Capsicum annuum HOM05D000170 ORTHO05D000159 2.7e-07 60.5 46 67.4
Thecc.03G209500 Theobroma cacao HOM05D000170 ORTHO05D000159 2.7e-07 60.5 46 65.2
CAN.G303.28 Capsicum annuum HOM05D000170 ORTHO05D000159 3.6e-07 60.1 46 65.2
CAN.G303.32 Capsicum annuum HOM05D000170 ORTHO05D000159 4.7e-07 59.7 47 61.7
Gohir.D08G116900 Gossypium hirsutum HOM05D000170 ORTHO05D000159 4.7e-07 59.7 46 65.2
Gorai.004G125600 Gossypium raimondii HOM05D000170 ORTHO05D000159 4.7e-07 59.7 46 65.2
FAN10G4064 Fragaria x ananassa HOM05D000170 ORTHO05D000159 6.1e-07 59.3 46 65.2
Nitab4.5_0000021g0020 Nicotiana tabacum HOM05D000170 ORTHO05D000159 6.1e-07 59.3 46 67.4
FAN03G1650 Fragaria x ananassa HOM05D000170 ORTHO05D000159 7.9e-07 58.9 46 65.2
Nitab4.5_0007775g0010 Nicotiana tabacum HOM05D000170 ORTHO05D000159 7.9e-07 58.9 47 66.0
Gohir.A08G105100 Gossypium hirsutum HOM05D000170 ORTHO05D000159 1.0e-06 58.5 46 65.2
FAN01G2351 Fragaria x ananassa HOM05D000170 ORTHO05D000159 1.4e-06 58.2 46 63.0
CAN.G303.33 Capsicum annuum HOM05D000170 ORTHO05D000159 1.8e-06 57.8 46 63.0
Dinv17295 Davidia involucrata HOM05D000170 ORTHO05D000159 1.8e-06 57.8 46 63.0
FAN10G1035 Fragaria x ananassa HOM05D000170 ORTHO05D000159 1.8e-06 57.8 46 63.0
Lj3A893G82 Lonicera japonica HOM05D000170 ORTHO05D000159 1.8e-06 57.8 48 62.5
Duzib068G0252 Durio zibethinus HOM05D000170 ORTHO05D000159 2.3e-06 57.4 46 63.0
Oeu061032.1 Olea europaea HOM05D000170 ORTHO05D000159 2.3e-06 57.4 46 58.7
BolC1t02355H Brassica oleracea HOM05D000170 ORTHO05D000159 3.0e-06 57.0 65 52.3
COL.COLO4_14378 Corchorus olitorius HOM05D000170 ORTHO05D000159 3.0e-06 57.0 46 63.0
Psat5g071520 Pisum sativum HOM05D000170 ORTHO05D000159 3.0e-06 57.0 46 60.9
Eucgr.A01397 Eucalyptus grandis HOM05D000170 ORTHO05D000159 3.9e-06 56.6 46 63.0
QL09p034300 Quercus lobata HOM05D000170 ORTHO05D000159 3.9e-06 56.6 50 56.0
TWI23G0335 Tripterygium wilfordii HOM05D000170 ORTHO05D000159 3.9e-06 56.6 46 60.9
Actinidia18683 Actinidia chinensis HOM05D000170 ORTHO05D000159 5.1e-06 56.2 47 59.6
CSS0035899 Camellia sinensis var. sinensis HOM05D000170 ORTHO05D000159 5.1e-06 56.2 46 58.7
Ciclev10024037m.g Citrus clementina HOM05D000170 ORTHO05D000159 5.1e-06 56.2 48 54.2
Haze_00304 Corylus avellana HOM05D000170 ORTHO05D000159 5.1e-06 56.2 46 60.9
TAR375G0759 Trochodendron aralioides HOM05D000170 ORTHO05D000159 5.1e-06 56.2 46 56.5
Actinidia08701 Actinidia chinensis HOM05D000170 ORTHO05D000159 6.7e-06 55.8 48 58.3
Cpa.g.sc3.161 Carica papaya HOM05D000170 ORTHO05D000159 6.7e-06 55.8 48 60.4
Solyc03g080180.4 Solanum lycopersicum HOM05D000170 ORTHO05D000159 6.7e-06 55.8 46 60.9
BcaC09g50553 Brassica carinata HOM05D000170 ORTHO05D000159 8.8e-06 55.5 65 50.8
C01p24000 Brassica napus HOM05D000170 ORTHO05D000159 8.8e-06 55.5 65 50.8
Ciclev10020814m.g Citrus clementina HOM05D000170 ORTHO05D000159 8.8e-06 55.5 45 57.8
Duzib205G0986 Durio zibethinus HOM05D000170 ORTHO05D000159 8.8e-06 55.5 46 58.7
Thhalv10027501m.g Eutrema salsugineum HOM05D000170 ORTHO05D000159 8.8e-06 55.5 65 49.2
PGSC0003DMG400000560 Solanum tuberosum HOM05D000170 ORTHO05D000159 8.8e-06 55.5 46 60.9


User provided reference genes

Program Settings