Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold169G38700 Striga asiatica HOM05D007827 ORTHO05D009749 2.7e-118 428.7 218 100.0
SGA_v2.0_scaffold20G09207 Striga asiatica HOM05D007827 ORTHO05D009749 6.3e-11 72.0 44 68.2
Cc08_g10870 Coffea canephora HOM05D007827 ORTHO05D009749 1.4e-10 70.9 75 48.0
Rhsim11G0042400 Rhododendron simsii HOM05D007827 ORTHO05D009749 1.2e-09 67.8 45 66.7
Oeu047101.1 Olea europaea HOM05D007827 ORTHO05D009749 4.5e-09 65.9 45 62.2
Solyc06g011440.1 Solanum lycopersicum HOM05D007827 ORTHO05D009749 4.5e-09 65.9 74 41.9
Sopen06g006480 Solanum pennellii HOM05D007827 ORTHO05D009749 4.5e-09 65.9 74 41.9
CSS0031213 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 5.9e-09 65.5 46 60.9
Dinv28003 Davidia involucrata HOM05D007827 ORTHO05D009749 5.9e-09 65.5 40 70.0
Migut.A00115 Erythranthe guttata HOM05D007827 ORTHO05D009749 5.9e-09 65.5 47 59.6
PGSC0003DMG400029878 Solanum tuberosum HOM05D007827 ORTHO05D009749 5.9e-09 65.5 74 41.9
Actinidia01227 Actinidia chinensis HOM05D007827 ORTHO05D009749 1.3e-08 64.3 40 67.5
unitig_37.g12945 Utricularia gibba HOM05D007827 ORTHO05D009749 1.7e-08 63.9 113 38.9
Lsat_1_v5_gn_6_13921 Lactuca sativa HOM05D007827 ORTHO05D009749 2.2e-08 63.5 47 57.4
CsaV3_2G000020 Cucumis sativus L. HOM05D003146 ORTHO05D001819 3.8e-08 62.8 137 27.0
SalBow4G1896 Salvia bowleyana HOM05D007827 ORTHO05D009749 3.8e-08 62.8 62 48.4
CSS0004361 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 5.0e-08 62.4 40 65.0
CsaV3_UNG084670 Cucumis sativus L. HOM05D003146 ORTHO05D001819 5.0e-08 62.4 140 27.1
CsaV3_UNG132030 Cucumis sativus L. HOM05D003146 ORTHO05D001819 5.0e-08 62.4 140 27.1
CsaV3_UNG225750 Cucumis sativus L. HOM05D003146 ORTHO05D001819 5.0e-08 62.4 140 27.1
MELO3C019867.2 Cucumis melo HOM05D003146 ORTHO05D001819 6.5e-08 62.0 140 27.1
CsaV3_4G038000 Cucumis sativus L. HOM05D003146 ORTHO05D001819 6.5e-08 62.0 137 27.0
CsaV3_6G023780 Cucumis sativus L. HOM05D003146 ORTHO05D001819 6.5e-08 62.0 137 27.0
CsaV3_UNG007100 Cucumis sativus L. HOM05D003146 ORTHO05D001819 6.5e-08 62.0 137 27.0
CsaV3_UNG217460 Cucumis sativus L. HOM05D003146 ORTHO05D001819 6.5e-08 62.0 137 27.0
CsaV3_UNG235420 Cucumis sativus L. HOM05D003146 ORTHO05D001819 6.5e-08 62.0 137 27.0
Hma1.2p1_1933F.1_g308040 Hydrangea macrophylla HOM05D007827 ORTHO05D009749 6.5e-08 62.0 45 55.6
CsaV3_6G026320 Cucumis sativus L. HOM05D003146 ORTHO05D001819 8.5e-08 61.6 137 27.0
CsaV3_6G026340 Cucumis sativus L. HOM05D003146 ORTHO05D001819 8.5e-08 61.6 137 27.0
CsaV3_6G027350 Cucumis sativus L. HOM05D003146 ORTHO05D001819 8.5e-08 61.6 137 27.0
Hma1.2p1_0801F.1_g220250 Hydrangea macrophylla HOM05D007827 ORTHO05D009749 8.5e-08 61.6 44 61.4
Hma1.2p1_3273F.1_g334810 Hydrangea macrophylla HOM05D003146 ORTHO05D001819 8.5e-08 61.6 80 35.0
Hma1.2p1_3469F.1_g336200 Hydrangea macrophylla HOM05D003146 ORTHO05D001819 8.5e-08 61.6 80 35.0
Sabra06G0174900 Salix brachista HOM05D007827 ORTHO05D009749 8.5e-08 61.6 85 37.6
Haze_18158 Corylus avellana HOM05D007827 ORTHO05D009749 1.1e-07 61.2 86 44.2
Oeu018628.1 Olea europaea HOM05D007827 ORTHO05D009749 1.1e-07 61.2 46 56.5
Thecc.09G056900 Theobroma cacao HOM05D007827 ORTHO05D009749 1.5e-07 60.8 83 45.8
CiPaw.16G027300 Carya illinoinensis HOM05D007827 ORTHO05D009749 1.9e-07 60.5 90 41.1
MELO3C028017.2 Cucumis melo HOM05D003146 ORTHO05D001819 3.2e-07 59.7 140 26.4
Dinv29548 Davidia involucrata HOM05D003146 ORTHO05D001819 3.2e-07 59.7 106 33.0
ECA240G3049 Erigeron canadensis HOM05D007827 ORTHO05D009749 3.2e-07 59.7 51 49.0
MELO3C019864.2 Cucumis melo HOM05D003146 ORTHO05D001819 4.2e-07 59.3 140 25.7
Potri.006G226200 Populus trichocarpa HOM05D007827 ORTHO05D009749 4.2e-07 59.3 82 37.8
MELO3C001332.2 Cucumis melo HOM05D003146 ORTHO05D001819 5.5e-07 58.9 140 25.7
MELO3C028122.2 Cucumis melo HOM05D003146 ORTHO05D001819 5.5e-07 58.9 140 25.7
Medtr1g015840 Medicago truncatula HOM05D007827 ORTHO05D009749 5.5e-07 58.9 64 46.9
CAN.G130.10 Capsicum annuum HOM05D007827 ORTHO05D009749 7.2e-07 58.5 55 45.5
Nitab4.5_0000972g0020 Nicotiana tabacum HOM05D007827 ORTHO05D009749 7.2e-07 58.5 73 42.5
Peaxi162Scf00126g10015 Petunia axillaris HOM05D003146 ORTHO05D001819 7.2e-07 58.5 117 29.9
Peaxi162Scf01001g00001 Petunia axillaris HOM05D007827 ORTHO05D009749 7.2e-07 58.5 43 55.8
Solyc08g062840.1 Solanum lycopersicum HOM05D007827 ORTHO05D009749 7.2e-07 58.5 43 60.5
Sopen08g018370 Solanum pennellii HOM05D007827 ORTHO05D009749 7.2e-07 58.5 43 60.5
PGSC0003DMG400008199 Solanum tuberosum HOM05D007827 ORTHO05D009749 7.2e-07 58.5 43 60.5
ClCG08G010040 Citrullus lanatus HOM05D007827 ORTHO05D009749 9.4e-07 58.2 56 48.2
Dinv29549 Davidia involucrata HOM05D003146 ORTHO05D001819 9.4e-07 58.2 79 39.2
Nitab4.5_0007177g0010 Nicotiana tabacum HOM05D007827 ORTHO05D009749 9.4e-07 58.2 73 42.5
MELO3C019866.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.2e-06 57.8 140 25.0
HPP92_007654 Vanilla planifolia HOM05D007827 ORTHO05D009749 1.2e-06 57.8 45 60.0
ClCG06G004590 Citrullus lanatus HOM05D003146 ORTHO05D001819 1.6e-06 57.4 147 24.5
MELO3C019860.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.6e-06 57.4 140 25.7
CsaV3_UNG044260 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.6e-06 57.4 80 35.0
CsaV3_UNG083670 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.6e-06 57.4 80 35.0
Peaxi162Scf00297g00062 Petunia axillaris HOM05D007827 ORTHO05D009749 1.6e-06 57.4 40 57.5
ATR0789G035 Amborella trichopoda HOM05D007827 ORTHO05D009749 2.1e-06 57.0 64 46.9
MELO3C027590.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.1e-06 57.0 140 25.7
Nitab4.5_0007037g0010 Nicotiana tabacum HOM05D007827 ORTHO05D009749 2.1e-06 57.0 40 52.5
CSS0026056 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 2.7e-06 56.6 90 38.9
MELO3C034826.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.7e-06 56.6 80 33.8
DCAR_003136 Daucus carota HOM05D007827 ORTHO05D009749 2.7e-06 56.6 43 55.8
MD15G1056900 Malus domestica HOM05D007827 ORTHO05D009749 2.7e-06 56.6 77 42.9
MELO3C030075.2 Cucumis melo HOM05D003146 ORTHO05D001819 3.6e-06 56.2 117 28.2
MELO3C034932.2 Cucumis melo HOM05D003146 ORTHO05D001819 3.6e-06 56.2 83 33.7
FvH4_2g31620 Fragaria vesca HOM05D007827 ORTHO05D009749 3.6e-06 56.2 41 58.5
FAN24G3029 Fragaria x ananassa HOM05D007827 ORTHO05D009749 3.6e-06 56.2 41 58.5
FAN27G2967 Fragaria x ananassa HOM05D007827 ORTHO05D009749 3.6e-06 56.2 41 58.5
TPR.G13014 Trifolium pratense HOM05D007827 ORTHO05D009749 3.6e-06 56.2 44 59.1
MELO3C000643.2 Cucumis melo HOM05D003146 ORTHO05D001819 4.7e-06 55.8 114 26.3
MELO3C027828.2 Cucumis melo HOM05D003146 ORTHO05D001819 4.7e-06 55.8 83 33.7
MELO3C034829.2 Cucumis melo HOM05D003146 ORTHO05D001819 4.7e-06 55.8 140 26.4
Nitab4.5_0002039g0090 Nicotiana tabacum HOM05D007827 ORTHO05D009749 4.7e-06 55.8 40 50.0
MELO3C030064.2 Cucumis melo HOM05D003146 ORTHO05D001819 8.0e-06 55.1 80 32.5


User provided reference genes

Program Settings