Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold169G38673 Striga asiatica HOM05D006497 ORTHO05D008263 1.5e-56 222.6 111 100.0
MSTRG.11681 Avicennia marina HOM05D006497 ORTHO05D008263 1.1e-27 126.7 106 64.2
Potri.018G058200 Populus trichocarpa HOM05D006497 ORTHO05D008263 5.5e-27 124.4 98 67.3
Hma1.2p1_0049F.1_g028230 Hydrangea macrophylla HOM05D006497 ORTHO05D008263 9.3e-27 123.6 108 61.1
Migut.E01547 Erythranthe guttata HOM05D006497 ORTHO05D008263 2.7e-26 122.1 110 60.9
SalBow1G7152 Salvia bowleyana HOM05D006497 ORTHO05D008263 2.7e-26 122.1 106 61.3
SGA_v2.0_scaffold163G38048 Striga asiatica HOM05D006497 ORTHO05D008263 1.3e-25 119.8 177 44.6
Migut.A00169 Erythranthe guttata HOM05D006497 ORTHO05D008263 3.9e-25 118.2 110 57.3
Sabra18G0054600 Salix brachista HOM05D006497 ORTHO05D008263 6.7e-25 117.5 98 64.3
Ah.10g034670 Amaranthus hybridus HOM05D006497 ORTHO05D008263 1.1e-24 116.7 107 54.2
Atru.chr7.2042 Acer truncatum HOM05D006497 ORTHO05D008263 1.5e-24 116.3 98 62.2
CANSAT54G2618 Cannabis sativa HOM05D006497 ORTHO05D008263 1.5e-24 116.3 98 63.3
QL12p040844 Quercus lobata HOM05D006497 ORTHO05D008263 1.9e-24 115.9 98 61.2
Sc09g0009540 Simmondsia chinensis HOM05D006497 ORTHO05D008263 1.9e-24 115.9 105 56.2
CSS0028638 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 2.5e-24 115.5 104 58.7
Rhsim05G0006000 Rhododendron simsii HOM05D006497 ORTHO05D008263 2.5e-24 115.5 113 55.8
GSVIVG01035327001 Vitis vinifera HOM05D006497 ORTHO05D008263 2.5e-24 115.5 104 57.7
Ciclev10009788m.g Citrus clementina HOM05D006497 ORTHO05D008263 3.3e-24 115.2 101 60.4
Thecc.09G049300 Theobroma cacao HOM05D006497 ORTHO05D008263 3.3e-24 115.2 99 61.6
Nitab4.5_0000318g0100 Nicotiana tabacum HOM05D006497 ORTHO05D008263 4.3e-24 114.8 110 58.2
ECA246G5018 Erigeron canadensis HOM05D006497 ORTHO05D008263 7.4e-24 114.0 108 57.4
FvH4_2g35131 Fragaria vesca HOM05D006497 ORTHO05D008263 7.4e-24 114.0 98 64.3
Nitab4.5_0002021g0040 Nicotiana tabacum HOM05D006497 ORTHO05D008263 7.4e-24 114.0 110 57.3
Peaxi162Scf00840g00427 Petunia axillaris HOM05D006497 ORTHO05D008263 7.4e-24 114.0 98 61.2
COL.COLO4_21011 Corchorus olitorius HOM05D006497 ORTHO05D008263 9.6e-24 113.6 112 56.2
Actinidia18207 Actinidia chinensis HOM05D006497 ORTHO05D008263 1.6e-23 112.8 105 58.1
TAR636G3582 Trochodendron aralioides HOM05D006497 ORTHO05D008263 1.6e-23 112.8 108 54.6
AUR62040211 Chenopodium quinoa HOM05D006497 ORTHO05D008263 2.1e-23 112.5 98 59.2
ClCG11G014990 Citrullus lanatus HOM05D006497 ORTHO05D008263 2.1e-23 112.5 98 62.2
PSO210G2909 Papaver somniferum HOM05D006497 ORTHO05D008263 2.1e-23 112.5 105 56.2
CiPaw.08G027800 Carya illinoinensis HOM05D006497 ORTHO05D008263 2.8e-23 112.1 101 60.4
CSS0007660 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 3.7e-23 111.7 104 56.7
CSS0049899 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 3.7e-23 111.7 104 56.7
DCAR_003057 Daucus carota HOM05D006497 ORTHO05D008263 4.8e-23 111.3 107 56.1
Lsat_1_v5_gn_3_27161 Lactuca sativa HOM05D006497 ORTHO05D008263 4.8e-23 111.3 104 57.7
EL10Ac2g03958 Beta vulgaris HOM05D006497 ORTHO05D008263 6.2e-23 110.9 98 59.2
Cpa.g.sc27.217 Carica papaya HOM05D006497 ORTHO05D008263 8.2e-23 110.5 109 56.0
FAN15G0473 Fragaria x ananassa HOM05D006497 ORTHO05D008263 8.2e-23 110.5 98 62.2
unitig_32.g11478 Utricularia gibba HOM05D006497 ORTHO05D008263 8.2e-23 110.5 104 54.8
Haze_01965 Corylus avellana HOM05D006497 ORTHO05D008263 1.1e-22 110.2 101 59.4
Cc08_g10030 Coffea canephora HOM05D006497 ORTHO05D008263 1.4e-22 109.8 101 57.4
MELO3C003479.2 Cucumis melo HOM05D006497 ORTHO05D008263 1.4e-22 109.8 98 60.2
Solyc07g063140.1 Solanum lycopersicum HOM05D006497 ORTHO05D008263 2.4e-22 109.0 105 56.2
Sp7g30690 Schrenkiella parvula HOM05D006497 ORTHO05D008263 3.1e-22 108.6 98 58.2
Cfa005390 Carpinus fangiana HOM05D006497 ORTHO05D008263 4.0e-22 108.2 101 58.4
PGR031G1870 Punica granatum HOM05D006497 ORTHO05D008263 5.3e-22 107.8 98 58.2
Sopen07g031330 Solanum pennellii HOM05D006497 ORTHO05D008263 5.3e-22 107.8 98 57.1
RcHm_v2.0_Chr6g0306821 Rosa chinensis HOM05D006497 ORTHO05D008263 9.0e-22 107.1 96 61.5
Nn8g39006 Nelumbo nucifera HOM05D006497 ORTHO05D008263 1.2e-21 106.7 104 54.8
Oeu011793.1 Olea europaea HOM05D006497 ORTHO05D008263 1.2e-21 106.7 133 48.9
Sed0009640 Sechium edule HOM05D006497 ORTHO05D008263 1.5e-21 106.3 108 55.6
THA.LOC104803742 Tarenaya hassleriana HOM05D006497 ORTHO05D008263 1.5e-21 106.3 101 53.5
CsaV3_3G048400 Cucumis sativus L. HOM05D006497 ORTHO05D008263 2.0e-21 105.9 98 58.2
Gohir.A07G022176 Gossypium hirsutum HOM05D006497 ORTHO05D008263 2.0e-21 105.9 113 51.3
Gorai.001G024500 Gossypium raimondii HOM05D006497 ORTHO05D008263 2.0e-21 105.9 99 56.6
Duzib168G0301 Durio zibethinus HOM05D006497 ORTHO05D008263 2.6e-21 105.5 112 53.6
PSO210G1815 Papaver somniferum HOM05D006497 ORTHO05D008263 2.6e-21 105.5 103 54.4
Eucgr.C00622 Eucalyptus grandis HOM05D006497 ORTHO05D008263 3.4e-21 105.1 97 56.7
arahy.Tifrunner.gnm1.ann1.0Y6FKJ Arachis hypogaea HOM05D006497 ORTHO05D008263 5.8e-21 104.4 112 51.8
BcaB03g12770 Brassica carinata HOM05D006497 ORTHO05D008263 5.8e-21 104.4 98 55.1
AUR62009213 Chenopodium quinoa HOM05D006497 ORTHO05D008263 5.8e-21 104.4 98 56.1
PGSC0003DMG400012416 Solanum tuberosum HOM05D006497 ORTHO05D008263 7.6e-21 104.0 105 54.3
ATR0749G075 Amborella trichopoda HOM05D006497 ORTHO05D008263 1.0e-20 103.6 108 53.7
CDE10G0177 Ceratophyllum demersum HOM05D006497 ORTHO05D008263 1.0e-20 103.6 112 50.9
Medtr1g095920 Medicago truncatula HOM05D006497 ORTHO05D008263 1.3e-20 103.2 111 51.4
Sed0025405 Sechium edule HOM05D006497 ORTHO05D008263 1.3e-20 103.2 99 55.6
TPR.G11934 Trifolium pratense HOM05D006497 ORTHO05D008263 1.3e-20 103.2 97 55.7
A08p17840 Brassica napus HOM05D006497 ORTHO05D008263 1.7e-20 102.8 98 55.1
C03p86910 Brassica napus HOM05D006497 ORTHO05D008263 1.7e-20 102.8 98 55.1
BolC3t20984H Brassica oleracea HOM05D006497 ORTHO05D008263 1.7e-20 102.8 98 55.1
CAN.G162.59 Capsicum annuum HOM05D006497 ORTHO05D008263 1.7e-20 102.8 107 54.2
Nn8g40951 Nelumbo nucifera HOM05D006497 ORTHO05D008263 1.7e-20 102.8 105 54.3
Prupe.1G443400 Prunus persica HOM05D006497 ORTHO05D008263 1.7e-20 102.8 101 56.4
Glyma.20G177400 Glycine max HOM05D006497 ORTHO05D008263 2.2e-20 102.4 111 50.5
ATR0304G027 Amborella trichopoda HOM05D006497 ORTHO05D008263 2.9e-20 102.1 108 52.8
Aqoxy6G00985 Aquilegia oxysepala HOM05D006497 ORTHO05D008263 2.9e-20 102.1 112 51.8
BraA08t33734Z Brassica rapa HOM05D006497 ORTHO05D008263 2.9e-20 102.1 98 55.1
Ca_10596_v3 Cicer arietinum L. HOM05D006497 ORTHO05D008263 2.9e-20 102.1 97 54.6
Thhalv10026449m.g Eutrema salsugineum HOM05D006497 ORTHO05D008263 3.8e-20 101.7 98 53.1
Lalb_Chr06g0162131 Lupinus albus HOM05D006497 ORTHO05D008263 3.8e-20 101.7 100 57.0
MD08G1108800 Malus domestica HOM05D006497 ORTHO05D008263 3.8e-20 101.7 95 56.8
Os03g0651000 Oryza sativa ssp. japonica HOM05D006497 ORTHO05D008263 4.9e-20 101.3 98 55.1
BcaNung02143 Brassica carinata HOM05D006497 ORTHO05D008263 6.5e-20 100.9 98 54.1
CDE10G1018 Ceratophyllum demersum HOM05D006497 ORTHO05D008263 8.4e-20 100.5 112 50.0
Glyma.10G214200 Glycine max HOM05D006497 ORTHO05D008263 8.4e-20 100.5 111 48.6
arahy.Tifrunner.gnm1.ann1.E0CW41 Arachis hypogaea HOM05D006497 ORTHO05D008263 1.1e-19 100.1 112 49.1
Phvul.007G091500 Phaseolus vulgaris HOM05D006497 ORTHO05D008263 1.1e-19 100.1 111 49.5
Psat6g186080 Pisum sativum HOM05D006497 ORTHO05D008263 1.1e-19 100.1 111 49.5
TPR.G1790 Trifolium pratense HOM05D006497 ORTHO05D008263 2.5e-19 99.0 96 54.2
BolC7t46384H Brassica oleracea HOM05D006497 ORTHO05D008263 3.2e-19 98.6 104 50.0
VMungo0720G1877 Vigna mungo HOM05D006497 ORTHO05D008263 4.2e-19 98.2 111 49.5
Zm00001eb218450 Zea mays HOM05D006497 ORTHO05D008263 4.2e-19 98.2 97 53.6
Carub.0007s0757 Capsella rubella HOM05D006497 ORTHO05D008263 7.1e-19 97.4 98 52.0
SEGI_35319 Sequoiadendron giganteum HOM05D006497 ORTHO05D008263 9.3e-19 97.1 101 52.5
Hund19485 Selenicereus undatus HOM05D006497 ORTHO05D008263 1.2e-18 96.7 150 42.0
AL7G18780 Arabidopsis lyrata HOM05D006497 ORTHO05D008263 2.1e-18 95.9 101 50.5
A03p61670 Brassica napus HOM05D006497 ORTHO05D008263 3.5e-18 95.1 104 49.0
C07p59400 Brassica napus HOM05D006497 ORTHO05D008263 3.5e-18 95.1 105 49.5
BraA03t15206Z Brassica rapa HOM05D006497 ORTHO05D008263 3.5e-18 95.1 104 49.0
AT4G32915 Arabidopsis thaliana HOM05D006497 ORTHO05D008263 4.6e-18 94.7 101 50.5
CARHR240920 Cardamine hirsuta HOM05D006497 ORTHO05D008263 1.3e-17 93.2 98 50.0
Lj5g0021165 Lotus japonicus HOM05D006497 ORTHO05D008263 1.3e-17 93.2 97 49.5
Aa31LG2G18050 Aethionema arabicum HOM05D006497 ORTHO05D008263 1.8e-17 92.8 92 53.3
FAN27G1249 Fragaria x ananassa HOM05D006497 ORTHO05D008263 3.9e-17 91.7 101 55.4
HPP92_013944 Vanilla planifolia HOM05D006497 ORTHO05D008263 5.1e-17 91.3 99 46.5
TWI32G0413 Tripterygium wilfordii HOM05D006497 ORTHO05D008263 3.2e-11 72.0 73 56.2
HanXRQChr17g0538891 Helianthus annuus HOM05D006497 ORTHO05D008263 7.2e-11 70.9 79 53.2
arahy.Tifrunner.gnm1.ann1.2EH2S8 Arachis hypogaea HOM05D006497 ORTHO05D009640 1.2e-10 70.1 191 30.4
Mapoly0154s0030 Marchantia polymorpha HOM05D006497 ORTHO05D008263 4.6e-10 68.2 101 35.6
vmacro08276 Vaccinium macrocarpon HOM05D006497 ORTHO05D008263 2.3e-09 65.9 42 71.4
Pp3c2_33430 Physcomitrium patens HOM05D006497 ORTHO05D008263 1.1e-08 63.5 98 32.7
MBI13_g05466_MAGBIO Magnolia biondii HOM05D006497 ORTHO05D008263 3.3e-08 62.0 51 58.8
Rhsim07G0144900 Rhododendron simsii HOM05D006497 ORTHO05D008263 4.3e-08 61.6 44 63.6
CBR_g31997 Chara braunii HOM05D006497 ORTHO05D008263 5.7e-08 61.2 107 37.4
SMO146G0150 Selaginella moellendorffii HOM05D006497 ORTHO05D008263 8.2e-07 57.4 96 34.4
Manes.03G057500 Manihot esculenta HOM05D006497 ORTHO05D008263 1.8e-06 56.2 49 59.2


User provided reference genes

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