Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold169G38659 Striga asiatica HOM05D004583 ORTHO05D005469 0.0e+00 1117.4 569 100.0
Migut.E01537 Erythranthe guttata HOM05D004583 ORTHO05D005469 1.2e-199 700.3 572 67.3
SalBow1G6079 Salvia bowleyana HOM05D004583 ORTHO05D005469 2.3e-198 696.0 601 65.2
MSTRG.14029 Avicennia marina HOM05D004583 ORTHO05D005469 6.6e-193 677.9 577 64.3
Oeu038813.1 Olea europaea HOM05D004583 ORTHO05D005469 1.2e-175 620.5 573 58.3
MSTRG.1664 Avicennia marina HOM05D004583 ORTHO05D005469 2.1e-175 619.8 497 63.6
Sopen12g031740 Solanum pennellii HOM05D004583 ORTHO05D005469 4.4e-173 612.1 571 59.5
Solyc12g095840.2 Solanum lycopersicum HOM05D004583 ORTHO05D005469 9.9e-173 610.9 571 59.4
Nitab4.5_0001737g0070 Nicotiana tabacum HOM05D004583 ORTHO05D005469 6.6e-169 598.2 579 58.7
Peaxi162Scf00064g01528 Petunia axillaris HOM05D004583 ORTHO05D005469 1.5e-168 597.0 574 58.9
CAN.G208.65 Capsicum annuum HOM05D004583 ORTHO05D005469 4.3e-168 595.5 532 58.5
Cc08_g09870 Coffea canephora HOM05D004583 ORTHO05D005469 7.3e-168 594.7 576 57.3
CSS0042231 Camellia sinensis var. sinensis HOM05D004583 ORTHO05D005469 1.5e-165 587.0 574 54.9
Nitab4.5_0001309g0070 Nicotiana tabacum HOM05D004583 ORTHO05D005469 5.8e-165 585.1 573 58.5
Hma1.2p1_0049F.1_g028360 Hydrangea macrophylla HOM05D004583 ORTHO05D005469 7.8e-162 574.7 575 55.7
Actinidia15745 Actinidia chinensis HOM05D004583 ORTHO05D005469 6.2e-159 565.1 578 52.9
HanXRQChr11g0352321 Helianthus annuus HOM05D004583 ORTHO05D005469 5.2e-158 562.0 567 52.9
Ciclev10007949m.g Citrus clementina HOM05D004583 ORTHO05D005469 2.6e-157 559.7 578 53.1
Sc09g0009440 Simmondsia chinensis HOM05D004583 ORTHO05D005469 5.8e-157 558.5 576 52.4
Potri.018G046700 Populus trichocarpa HOM05D004583 ORTHO05D005469 7.6e-157 558.1 574 52.1
Rhsim02G0175400 Rhododendron simsii HOM05D004583 ORTHO05D005469 1.7e-156 557.0 567 54.3
Lsat_1_v5_gn_1_42160 Lactuca sativa HOM05D004583 ORTHO05D005469 2.9e-156 556.2 567 52.2
MD15G1090900 Malus domestica HOM05D004583 ORTHO05D005469 4.9e-156 555.4 575 51.5
GSVIVG01035292001 Vitis vinifera HOM05D004583 ORTHO05D005469 6.4e-156 555.1 586 51.9
unitig_32.g11475 Utricularia gibba HOM05D004583 ORTHO05D005469 5.4e-155 552.0 563 54.2
QL12p041048 Quercus lobata HOM05D004583 ORTHO05D005469 3.5e-154 549.3 579 52.0
DCAR_004462 Daucus carota HOM05D004583 ORTHO05D005469 4.6e-154 548.9 564 52.0
Prupe.1G445300 Prunus persica HOM05D004583 ORTHO05D005469 1.7e-153 547.0 575 50.4
Sabra18G0045300 Salix brachista HOM05D004583 ORTHO05D005469 3.9e-153 545.8 592 50.7
Cfa013385 Carpinus fangiana HOM05D004583 ORTHO05D005469 3.3e-152 542.7 580 51.7
TAR636G0454 Trochodendron aralioides HOM05D004583 ORTHO05D005469 7.3e-152 541.6 577 50.1
Potri.006G236400 Populus trichocarpa HOM05D004583 ORTHO05D005469 3.6e-151 539.3 574 51.7
TWI63G0012 Tripterygium wilfordii HOM05D004583 ORTHO05D005469 6.2e-151 538.5 578 51.0
CANSAT25G3668 Cannabis sativa HOM05D004583 ORTHO05D005469 4.0e-150 535.8 576 50.3
MD08G1111400 Malus domestica HOM05D004583 ORTHO05D005469 2.0e-149 533.5 575 49.6
Nn6g35316 Nelumbo nucifera HOM05D004583 ORTHO05D005469 3.8e-148 529.3 588 49.5
PGR031G0432 Punica granatum HOM05D004583 ORTHO05D005469 6.4e-148 528.5 594 50.3
FAN20G1421 Fragaria x ananassa HOM05D004583 ORTHO05D005469 1.1e-147 527.7 570 52.3
ECA248G2390 Erigeron canadensis HOM05D004583 ORTHO05D005469 2.4e-147 526.6 571 51.1
Sabra06G0184800 Salix brachista HOM05D004583 ORTHO05D005469 3.2e-147 526.2 583 51.5
FvH4_2g35320 Fragaria vesca HOM05D004583 ORTHO05D005469 4.2e-147 525.8 570 52.3
RcHm_v2.0_Chr6g0306601 Rosa chinensis HOM05D004583 ORTHO05D005469 4.2e-147 525.8 571 51.8
CiPaw.08G027000 Carya illinoinensis HOM05D004583 ORTHO05D005469 7.1e-147 525.0 586 50.7
Manes.16G073800 Manihot esculenta HOM05D004583 ORTHO05D005469 3.5e-146 522.7 565 49.2
BcaB08g35216 Brassica carinata HOM05D004583 ORTHO05D005469 4.6e-146 522.3 591 48.6
A03p27060 Brassica napus HOM05D004583 ORTHO05D005469 6.0e-146 521.9 583 50.1
BraA03t11919Z Brassica rapa HOM05D004583 ORTHO05D005469 1.8e-145 520.4 583 49.9
Sp4g05420 Schrenkiella parvula HOM05D004583 ORTHO05D005469 2.3e-145 520.0 583 48.9
AL4G17420 Arabidopsis lyrata HOM05D004583 ORTHO05D005469 3.0e-145 519.6 586 49.1
BolC3t15588H Brassica oleracea HOM05D004583 ORTHO05D005469 6.7e-145 518.5 582 50.2
Thhalv10001956m.g Eutrema salsugineum HOM05D004583 ORTHO05D005469 8.7e-145 518.1 581 49.1
C03p32470 Brassica napus HOM05D004583 ORTHO05D005469 1.1e-144 517.7 582 50.2
AT2G25740 Arabidopsis thaliana HOM05D004583 ORTHO05D005469 1.3e-143 514.2 587 48.4
Thecc.09G047500 Theobroma cacao HOM05D004583 ORTHO05D005469 1.3e-143 514.2 575 48.9
Hund03382 Selenicereus undatus HOM05D004583 ORTHO05D005469 1.8e-142 510.4 580 47.2
Carub.0004s0553 Capsella rubella HOM05D004583 ORTHO05D005469 4.0e-142 509.2 588 47.8
Lalb_Chr22g0361041 Lupinus albus HOM05D004583 ORTHO05D005469 6.9e-142 508.4 579 50.9
Eucgr.C00611 Eucalyptus grandis HOM05D004583 ORTHO05D005469 1.2e-141 507.7 581 49.2
A09p55470 Brassica napus HOM05D004583 ORTHO05D005469 1.5e-141 507.3 585 49.9
Medtr1g007160 Medicago truncatula HOM05D004583 ORTHO05D005469 2.0e-141 506.9 576 49.7
Aa31LG5G9840 Aethionema arabicum HOM05D004583 ORTHO05D005469 4.5e-141 505.8 580 47.6
Gohir.D07G025000 Gossypium hirsutum HOM05D004583 ORTHO05D005469 5.8e-141 505.4 571 48.5
Sed0024833 Sechium edule HOM05D004583 ORTHO05D005469 5.8e-141 505.4 580 47.8
arahy.Tifrunner.gnm1.ann1.R6LPAT Arachis hypogaea HOM05D004583 ORTHO05D005469 7.6e-141 505.0 574 48.3
Gohir.A07G022241 Gossypium hirsutum HOM05D004583 ORTHO05D005469 7.6e-141 505.0 564 47.9
TWI34G1497 Tripterygium wilfordii HOM05D004583 ORTHO05D005469 7.6e-141 505.0 578 48.3
FAN27G2572 Fragaria x ananassa HOM05D004583 ORTHO05D005469 2.9e-140 503.1 589 50.3
BcaC07g40848 Brassica carinata HOM05D004583 ORTHO05D005469 3.8e-140 502.7 582 47.9
TAR624G1263 Trochodendron aralioides HOM05D004583 ORTHO05D005469 3.8e-140 502.7 575 48.3
MBI04_g20300_MAGBIO Magnolia biondii HOM05D004583 ORTHO05D005469 4.9e-140 502.3 571 49.9
BolC8t51418H Brassica oleracea HOM05D004583 ORTHO05D005469 6.4e-140 501.9 582 47.8
Gorai.001G026100 Gossypium raimondii HOM05D004583 ORTHO05D005469 6.4e-140 501.9 563 48.0
ClCG08G012110 Citrullus lanatus HOM05D004583 ORTHO05D005469 1.1e-139 501.1 584 48.1
Lj1g0018877 Lotus japonicus HOM05D004583 ORTHO05D005469 5.5e-139 498.8 591 48.7
SHI18791 Sapria himalayana HOM05D004583 ORTHO05D005469 1.6e-138 497.3 578 48.8
Aqoxy7G03869 Aquilegia oxysepala HOM05D004583 ORTHO05D005469 7.9e-138 495.0 589 49.2
THA.LOC104803803 Tarenaya hassleriana HOM05D004583 ORTHO05D005469 1.5e-136 490.7 588 50.5
EL10Ac2g03985 Beta vulgaris HOM05D004583 ORTHO05D005469 9.6e-136 488.0 589 47.0
TPR.G24505 Trifolium pratense HOM05D004583 ORTHO05D005469 3.7e-135 486.1 579 47.5
Dinv23388 Davidia involucrata HOM05D004583 ORTHO05D005469 8.2e-135 485.0 510 53.5
Duzib168G1134 Durio zibethinus HOM05D004583 ORTHO05D005469 1.4e-134 484.2 565 47.8
Psat6g035200 Pisum sativum HOM05D004583 ORTHO05D005469 9.0e-134 481.5 577 47.8
PSO210G3632 Papaver somniferum HOM05D004583 ORTHO05D005469 2.0e-133 480.3 579 46.3
Medtr3g110340 Medicago truncatula HOM05D004583 ORTHO05D005469 2.6e-133 479.9 573 47.3
VMungo1309G0941 Vigna mungo HOM05D004583 ORTHO05D005469 3.4e-133 479.6 589 48.4
AUR62009234 Chenopodium quinoa HOM05D004583 ORTHO05D005469 5.8e-133 478.8 593 45.2
Phvul.009G111600 Phaseolus vulgaris HOM05D004583 ORTHO05D005469 5.8e-133 478.8 588 47.8
CARHR115490 Cardamine hirsuta HOM05D004583 ORTHO05D005469 7.6e-133 478.4 525 48.4
Ca_15574_v3 Cicer arietinum L. HOM05D004583 ORTHO05D005469 1.0e-132 478.0 564 47.3
AUR62041959 Chenopodium quinoa HOM05D004583 ORTHO05D005469 6.5e-132 475.3 635 42.5
FAN15G2845 Fragaria x ananassa HOM05D004583 ORTHO05D005469 1.6e-130 470.7 570 47.0
PSO210G2011 Papaver somniferum HOM05D004583 ORTHO05D005469 2.7e-130 469.9 574 46.5
ATR0705G143 Amborella trichopoda HOM05D004583 ORTHO05D005469 4.6e-130 469.2 605 44.3
C08p38460 Brassica napus HOM05D004583 ORTHO05D005469 1.0e-129 468.0 582 46.2
Lj7C698G10 Lonicera japonica HOM05D004583 ORTHO05D005469 8.7e-129 464.9 532 48.5
Psat5g020600 Pisum sativum HOM05D004583 ORTHO05D005469 8.7e-129 464.9 513 48.7
CsaV3_2G030710 Cucumis sativus L. HOM05D004583 ORTHO05D005469 1.3e-127 461.1 585 45.1
AUR62041963 Chenopodium quinoa HOM05D004583 ORTHO05D005469 6.3e-127 458.8 605 43.1
TPR.G12398 Trifolium pratense HOM05D004583 ORTHO05D005469 8.2e-127 458.4 575 44.7
BraA09t40949Z Brassica rapa HOM05D004583 ORTHO05D005469 9.0e-126 454.9 552 48.7
COL.COLO4_20995 Corchorus olitorius HOM05D004583 ORTHO05D005469 3.4e-125 453.0 536 47.4
CANSAT35G1178 Cannabis sativa HOM05D004583 ORTHO05D005469 1.1e-123 448.0 583 46.1
vmacro11048 Vaccinium macrocarpon HOM05D004583 ORTHO05D005469 1.9e-123 447.2 551 44.5
arahy.Tifrunner.gnm1.ann1.6GB5J4 Arachis hypogaea HOM05D004583 ORTHO05D005469 2.1e-122 443.7 535 48.0
arahy.Tifrunner.gnm1.ann1.AK4U3Y Arachis hypogaea HOM05D004583 ORTHO05D005469 4.6e-122 442.6 505 47.3
arahy.Tifrunner.gnm1.ann1.M0YYQ7 Arachis hypogaea HOM05D004583 ORTHO05D005469 1.4e-121 441.0 505 47.1
Glyma.04G086400 Glycine max HOM05D004583 ORTHO05D005469 1.1e-120 438.0 503 46.9
Os05g0521500 Oryza sativa ssp. japonica HOM05D004583 ORTHO05D005469 4.8e-119 432.6 602 41.4
Lalb_Chr23g0269711 Lupinus albus HOM05D004583 ORTHO05D005469 2.0e-117 427.2 513 45.6
BcaC01g04904 Brassica carinata HOM05D004583 ORTHO05D005469 3.4e-117 426.4 582 44.5
MELO3C011128.2 Cucumis melo HOM05D004583 ORTHO05D005469 5.9e-117 425.6 658 40.7
Actinidia14686 Actinidia chinensis HOM05D004583 ORTHO05D005469 9.4e-115 418.3 578 43.6
Zm00001eb293710 Zea mays HOM05D004583 ORTHO05D005469 1.0e-113 414.8 614 39.6
CiPaw.07G202200 Carya illinoinensis HOM05D004583 ORTHO05D005469 9.4e-107 391.7 490 47.8
Aqoxy7G01424 Aquilegia oxysepala HOM05D004583 ORTHO05D005469 4.7e-106 389.4 586 40.6
HPP92_022971 Vanilla planifolia HOM05D004583 ORTHO05D005469 5.2e-105 386.0 478 44.1
DCAR_003076 Daucus carota HOM05D004583 ORTHO05D005469 8.8e-105 385.2 535 43.6
Rhsim02G0175600 Rhododendron simsii HOM05D004583 ORTHO05D005469 2.6e-104 383.6 499 45.7
Mapoly0168s0005 Marchantia polymorpha HOM05D004583 ORTHO05D005469 6.3e-103 379.0 569 38.0
Pp3c6_5840 Physcomitrium patens HOM05D004583 ORTHO05D005469 1.3e-100 371.3 616 36.4
Pp3c5_21890 Physcomitrium patens HOM05D004583 ORTHO05D005469 2.9e-100 370.2 620 35.8
Pp3c5_21897 Physcomitrium patens HOM05D004583 ORTHO05D005469 2.9e-100 370.2 620 35.8
Pp3c9_19040 Physcomitrium patens HOM05D004583 ORTHO05D005469 9.4e-99 365.2 570 37.7
Os01g0743600 Oryza sativa ssp. japonica HOM05D004583 ORTHO05D005469 1.2e-98 364.8 594 38.2
Pp3c15_22980 Physcomitrium patens HOM05D004583 ORTHO05D005469 2.0e-96 357.5 567 37.7
SMO238G0017 Selaginella moellendorffii HOM05D004583 ORTHO05D005469 6.8e-89 332.4 533 37.5
Haze_21911 Corylus avellana HOM05D004583 ORTHO05D005469 3.5e-85 320.1 298 54.4
Atru.chr7.2059 Acer truncatum HOM05D004583 ORTHO05D005469 4.4e-80 303.1 318 51.3
SEGI_02523 Sequoiadendron giganteum HOM05D004583 ORTHO05D005469 1.1e-78 298.5 499 42.7
CDE02G1982 Ceratophyllum demersum HOM05D004583 ORTHO05D001336 2.4e-78 297.4 365 43.8
Zm00001eb153580 Zea mays HOM05D004583 ORTHO05D005469 2.9e-76 290.4 587 34.1
Pp3c27_6400 Physcomitrium patens HOM05D004583 ORTHO05D005469 2.1e-66 257.7 622 32.0
MBI04_g32315_MAGBIO Magnolia biondii HOM05D004583 ORTHO05D005469 2.8e-66 257.3 163 69.3
Cpa.g.sc7.206 Carica papaya HOM05D004583 ORTHO05D005469 2.6e-64 250.8 163 68.7
Pp3c16_16060 Physcomitrium patens HOM05D004583 ORTHO05D005469 5.8e-64 249.6 618 29.9
CBR_g21950 Chara braunii HOM05D004583 ORTHO05D005469 1.1e-62 245.4 734 27.7
AagrBONN_evm.TU.Sc2ySwM_117.1952 Anthoceros agrestis HOM05D004583 ORTHO05D005469 4.0e-57 226.9 482 32.2
Ah.10g034890 Amaranthus hybridus HOM05D004583 ORTHO05D005469 4.0e-49 200.3 429 35.7
TPR.G9691 Trifolium pratense HOM05D004583 ORTHO05D005469 6.6e-44 183.0 190 45.8
Cpa.g.c37634 Carica papaya HOM05D004583 ORTHO05D005469 6.2e-42 176.4 290 39.3
Atru.chr7.2058 Acer truncatum HOM05D004583 ORTHO05D005469 8.4e-39 166.0 217 46.5
Haze_21912 Corylus avellana HOM05D004583 ORTHO05D005469 4.2e-38 163.7 155 58.7
CDE02G3504 Ceratophyllum demersum HOM05D004583 ORTHO05D005469 1.5e-32 145.2 152 53.9
Aqoxy6G01950 Aquilegia oxysepala HOM05D004583 ORTHO05D005469 2.9e-31 141.0 316 36.1
Glyma.06G087900 Glycine max HOM05D004583 ORTHO05D005469 2.4e-30 137.9 96 59.4
MBI04_g42480_MAGBIO Magnolia biondii HOM05D004583 ORTHO05D005469 1.8e-28 131.7 144 51.4
Ca_19225_v3 Cicer arietinum L. HOM05D004583 ORTHO05D005469 3.9e-28 130.6 163 50.9
Lj4g0027824 Lotus japonicus HOM05D004583 ORTHO05D005469 3.3e-27 127.5 136 53.7
Ca_12761_v3 Cicer arietinum L. HOM05D004583 ORTHO05D005469 7.4e-27 126.3 107 58.9
Aqoxy6G01951 Aquilegia oxysepala HOM05D004583 ORTHO05D005469 1.5e-24 118.6 90 60.0
PRCOL_00000859 Prasinoderma coloniale HOM05D004583 ORTHO05D005469 2.6e-24 117.9 181 36.5
MCO16G603 Micromonas commoda HOM05D004583 ORTHO05D005469 2.5e-22 111.3 166 38.0
Duzib150G0365 Durio zibethinus HOM05D004583 ORTHO05D005469 1.9e-14 85.1 68 50.0
TPR.G7872 Trifolium pratense HOM05D004583 ORTHO05D005469 1.9e-14 85.1 101 40.6
HPP92_022972 Vanilla planifolia HOM05D004583 ORTHO05D005469 9.7e-11 72.8 160 36.9


User provided reference genes

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