Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold169G38603 Striga asiatica HOM05D005391 ORTHO05D006694 4.5e-96 354.8 202 100.0
Migut.E01449 Erythranthe guttata HOM05D005391 ORTHO05D006694 6.4e-58 228.0 213 65.7
Oeu009657.1 Olea europaea HOM05D005391 ORTHO05D006694 4.3e-54 215.3 224 59.8
MSTRG.25825 Avicennia marina HOM05D005391 ORTHO05D006694 5.6e-54 214.9 222 64.0
unitig_32.g10935 Utricularia gibba HOM05D005391 ORTHO05D006694 4.9e-50 201.8 223 56.5
SalBow8G3527 Salvia bowleyana HOM05D005391 ORTHO05D006694 7.1e-49 198.0 212 63.2
Peaxi162Scf00045g01932 Petunia axillaris HOM05D005391 ORTHO05D006694 1.7e-47 193.4 186 62.9
Dinv23158 Davidia involucrata HOM05D005391 ORTHO05D006694 6.2e-45 184.9 192 63.0
vmacro16727 Vaccinium macrocarpon HOM05D005391 ORTHO05D006694 1.1e-44 184.1 199 55.3
PGSC0003DMG400026284 Solanum tuberosum HOM05D005391 ORTHO05D006694 1.4e-44 183.7 217 56.2
Nitab4.5_0000264g0120 Nicotiana tabacum HOM05D005391 ORTHO05D006694 1.2e-43 180.6 208 56.2
Actinidia36818 Actinidia chinensis HOM05D005391 ORTHO05D006694 9.9e-43 177.6 188 57.4
COL.COLO4_28143 Corchorus olitorius HOM05D005391 ORTHO05D006694 1.4e-41 173.7 209 51.7
Ciclev10032864m.g Citrus clementina HOM05D005391 ORTHO05D006694 2.4e-41 172.9 196 57.7
DCAR_016386 Daucus carota HOM05D005391 ORTHO05D006694 2.4e-41 172.9 183 55.7
TWI23G0649 Tripterygium wilfordii HOM05D005391 ORTHO05D006694 4.2e-41 172.2 198 53.5
CSS0003205 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 5.4e-41 171.8 192 58.9
CSS0033680 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 5.4e-41 171.8 192 58.9
Cc08_g07550 Coffea canephora HOM05D005391 ORTHO05D006694 9.3e-41 171.0 215 53.0
Lsat_1_v5_gn_4_81240 Lactuca sativa HOM05D005391 ORTHO05D006694 9.3e-41 171.0 202 51.0
Rhsim12G0176000 Rhododendron simsii HOM05D005391 ORTHO05D006694 1.2e-40 170.6 201 54.7
TWI14G1436 Tripterygium wilfordii HOM05D005391 ORTHO05D006694 2.7e-40 169.5 205 57.1
MD15G1005900 Malus domestica HOM05D005391 ORTHO05D006694 1.0e-39 167.5 204 53.4
Solyc08g006670.3 Solanum lycopersicum HOM05D005391 ORTHO05D006694 1.3e-39 167.2 213 57.3
Sopen08g002620 Solanum pennellii HOM05D005391 ORTHO05D006694 1.3e-39 167.2 213 57.3
FvH4_2g37750 Fragaria vesca HOM05D005391 ORTHO05D006694 1.7e-39 166.8 186 56.5
FAN15G0439 Fragaria x ananassa HOM05D005391 ORTHO05D006694 1.7e-39 166.8 185 57.3
Gohir.A07G050600 Gossypium hirsutum HOM05D005391 ORTHO05D006694 1.7e-39 166.8 204 51.5
FAN20G0870 Fragaria x ananassa HOM05D005391 ORTHO05D006694 2.3e-39 166.4 185 55.7
Sp2g26560 Schrenkiella parvula HOM05D005391 ORTHO05D006694 2.3e-39 166.4 182 53.3
CSS0043065 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 3.0e-39 166.0 193 52.8
Gohir.D07G055100 Gossypium hirsutum HOM05D005391 ORTHO05D006694 3.0e-39 166.0 205 51.2
Gorai.001G058300 Gossypium raimondii HOM05D005391 ORTHO05D006694 3.0e-39 166.0 207 51.7
Hund08624 Selenicereus undatus HOM05D005391 ORTHO05D006694 3.9e-39 165.6 188 55.3
Thecc.03G130500 Theobroma cacao HOM05D005391 ORTHO05D006694 5.1e-39 165.2 204 54.4
Potri.015G097800 Populus trichocarpa HOM05D005391 ORTHO05D006694 8.7e-39 164.5 193 51.3
CARHR277330 Cardamine hirsuta HOM05D005391 ORTHO05D006694 1.1e-38 164.1 188 52.7
FAN27G0224 Fragaria x ananassa HOM05D005391 ORTHO05D006694 1.1e-38 164.1 196 54.1
MD08G1006700 Malus domestica HOM05D005391 ORTHO05D006694 1.1e-38 164.1 205 54.1
Prupe.1G358600 Prunus persica HOM05D005391 ORTHO05D006694 2.5e-38 162.9 204 52.0
AUR62002017 Chenopodium quinoa HOM05D005391 ORTHO05D006694 3.3e-38 162.5 184 51.6
Nn4g22289 Nelumbo nucifera HOM05D005391 ORTHO05D006694 3.3e-38 162.5 185 55.1
CiPaw.11G006200 Carya illinoinensis HOM05D005391 ORTHO05D006694 5.6e-38 161.8 206 52.9
Manes.14G050400 Manihot esculenta HOM05D005391 ORTHO05D006694 5.6e-38 161.8 214 49.5
TAR629G0488 Trochodendron aralioides HOM05D005391 ORTHO05D006694 7.3e-38 161.4 185 55.1
MELO3C026202.2 Cucumis melo HOM05D005391 ORTHO05D006694 1.3e-37 160.6 210 47.6
MBI07_g28244_MAGBIO Magnolia biondii HOM05D005391 ORTHO05D006694 1.3e-37 160.6 184 52.7
C03p62960 Brassica napus HOM05D005391 ORTHO05D006694 1.6e-37 160.2 182 52.7
BolC3t18550H Brassica oleracea HOM05D005391 ORTHO05D006694 1.6e-37 160.2 182 52.7
AUR62003784 Chenopodium quinoa HOM05D005391 ORTHO05D006694 1.6e-37 160.2 184 51.1
RcHm_v2.0_Chr6g0303761 Rosa chinensis HOM05D005391 ORTHO05D006694 2.1e-37 159.8 185 60.0
Sed0002904 Sechium edule HOM05D005391 ORTHO05D006694 2.1e-37 159.8 206 48.5
Cpa.g.sc13.100 Carica papaya HOM05D005391 ORTHO05D006694 2.8e-37 159.5 209 50.2
EL10Ac6g15093 Beta vulgaris HOM05D005391 ORTHO05D006694 3.6e-37 159.1 205 50.2
PSO478G3696 Papaver somniferum HOM05D005391 ORTHO05D006694 3.6e-37 159.1 188 52.7
Ah.03g143420 Amaranthus hybridus HOM05D005391 ORTHO05D006694 6.2e-37 158.3 190 52.6
PSO017G3900 Papaver somniferum HOM05D005391 ORTHO05D006694 6.2e-37 158.3 188 52.1
Potri.012G099200 Populus trichocarpa HOM05D005391 ORTHO05D006694 6.2e-37 158.3 193 56.0
A06p30110 Brassica napus HOM05D005391 ORTHO05D006694 8.1e-37 157.9 183 52.5
BraA06t25962Z Brassica rapa HOM05D005391 ORTHO05D006694 8.1e-37 157.9 183 52.5
CsaV3_1G000500 Cucumis sativus L. HOM05D005391 ORTHO05D006694 8.1e-37 157.9 210 47.1
TPR.G14215 Trifolium pratense HOM05D005391 ORTHO05D006694 8.1e-37 157.9 187 52.4
AL8G40540 Arabidopsis lyrata HOM05D005391 ORTHO05D006694 1.1e-36 157.5 182 52.7
CiPaw.12G044000 Carya illinoinensis HOM05D005391 ORTHO05D006694 1.4e-36 157.1 201 51.2
A09p08280 Brassica napus HOM05D005391 ORTHO05D006694 1.8e-36 156.8 184 52.2
THA.LOC104798944 Tarenaya hassleriana HOM05D005391 ORTHO05D006694 6.9e-36 154.8 193 48.2
Duzib205G0229 Durio zibethinus HOM05D005391 ORTHO05D006694 9.0e-36 154.5 208 49.0
Sabra12G0072400 Salix brachista HOM05D005391 ORTHO05D006694 9.0e-36 154.5 192 52.6
Nn3g16438 Nelumbo nucifera HOM05D005391 ORTHO05D006694 1.2e-35 154.1 185 51.4
BraA09t36478Z Brassica rapa HOM05D005391 ORTHO05D006694 1.5e-35 153.7 184 50.5
ECA232G1626 Erigeron canadensis HOM05D005391 ORTHO05D006694 4.4e-35 152.1 183 47.5
GSVIVG01008565001 Vitis vinifera HOM05D005391 ORTHO05D006694 4.4e-35 152.1 186 57.0
Lj1g0005006 Lotus japonicus HOM05D005391 ORTHO05D006694 5.8e-35 151.8 184 50.0
BcaB04g19920 Brassica carinata HOM05D005391 ORTHO05D006694 7.6e-35 151.4 182 48.4
BcaB02g09758 Brassica carinata HOM05D005391 ORTHO05D006694 9.9e-35 151.0 182 53.8
Atru.chr6.1808 Acer truncatum HOM05D005391 ORTHO05D006694 1.3e-34 150.6 195 49.2
Medtr3g099130 Medicago truncatula HOM05D005391 ORTHO05D006694 1.3e-34 150.6 182 52.7
Psat5g051960 Pisum sativum HOM05D005391 ORTHO05D006694 1.3e-34 150.6 182 50.5
CANSAT80G1472 Cannabis sativa HOM05D005391 ORTHO05D006694 2.2e-34 149.8 194 49.5
Aa31LG1G18560 Aethionema arabicum HOM05D005391 ORTHO05D006694 2.9e-34 149.4 185 50.3
Carub.0008s2418 Capsella rubella HOM05D005391 ORTHO05D006694 3.8e-34 149.1 182 52.7
Lj5A95T81 Lonicera japonica HOM05D005391 ORTHO05D006694 3.8e-34 149.1 214 50.5
TAR371G0831 Trochodendron aralioides HOM05D005391 ORTHO05D006694 4.9e-34 148.7 185 51.4
Thhalv10004987m.g Eutrema salsugineum HOM05D005391 ORTHO05D006694 6.4e-34 148.3 184 54.3
AT5G63480 Arabidopsis thaliana HOM05D005391 ORTHO05D006694 1.1e-33 147.5 182 56.0
Ca_16053_v3 Cicer arietinum L. HOM05D005391 ORTHO05D006694 7.1e-33 144.8 186 50.0
arahy.Tifrunner.gnm1.ann1.S11VKX Arachis hypogaea HOM05D005391 ORTHO05D006694 9.3e-33 144.4 187 52.4
Sabra15G0118500 Salix brachista HOM05D005391 ORTHO05D006694 9.3e-33 144.4 217 45.6
Lalb_Chr23g0273681 Lupinus albus HOM05D005391 ORTHO05D006694 2.7e-32 142.9 185 47.6
BolC9t53848H Brassica oleracea HOM05D005391 ORTHO05D006694 3.5e-32 142.5 178 49.4
FAN26G2573 Fragaria x ananassa HOM05D005391 ORTHO05D006694 3.5e-32 142.5 180 50.6
Glyma.06G169200 Glycine max HOM05D005391 ORTHO05D006694 6.0e-32 141.7 180 48.3
ClCG06G017970 Citrullus lanatus HOM05D005391 ORTHO05D006694 7.8e-32 141.4 252 39.7
Haze_07152 Corylus avellana HOM05D005391 ORTHO05D006694 1.0e-31 141.0 204 51.5
Cfa018784 Carpinus fangiana HOM05D005391 ORTHO05D006694 6.6e-31 138.3 204 51.0
Glyma.04G196600 Glycine max HOM05D005391 ORTHO05D006694 1.1e-30 137.5 180 46.7
arahy.Tifrunner.gnm1.ann1.3A01UJ Arachis hypogaea HOM05D005391 ORTHO05D006694 1.5e-30 137.1 195 50.3
BcaC04g23332 Brassica carinata HOM05D005391 ORTHO05D006694 2.5e-30 136.3 178 48.3
C09p09360 Brassica napus HOM05D005391 ORTHO05D006694 2.5e-30 136.3 178 48.3
CDE10G0912 Ceratophyllum demersum HOM05D005391 ORTHO05D006694 9.6e-30 134.4 181 47.5
ATR0171G017 Amborella trichopoda HOM05D005391 ORTHO05D006694 1.3e-29 134.0 186 45.7
CDE04G2377 Ceratophyllum demersum HOM05D005391 ORTHO05D006694 2.1e-29 133.3 180 47.2
Aqoxy3G00618 Aquilegia oxysepala HOM05D005391 ORTHO05D006694 2.8e-29 132.9 190 49.5
Oeu040668.1 Olea europaea HOM05D005391 ORTHO05D006694 3.6e-29 132.5 186 49.5
Nitab4.5_0001362g0010 Nicotiana tabacum HOM05D005391 ORTHO05D006694 4.8e-29 132.1 207 48.3
Phvul.009G165600 Phaseolus vulgaris HOM05D005391 ORTHO05D006694 8.1e-29 131.3 180 51.1
Zm00001eb421130 Zea mays HOM05D005391 ORTHO05D006694 4.0e-28 129.0 188 43.6
QL10p002677 Quercus lobata HOM05D005391 ORTHO05D006694 5.3e-28 128.6 201 44.8
Aqoxy3G01572 Aquilegia oxysepala HOM05D005391 ORTHO05D006694 5.8e-27 125.2 196 46.4
arahy.Tifrunner.gnm1.ann1.CP8X4X Arachis hypogaea HOM05D005391 ORTHO05D006694 1.3e-26 124.0 229 42.8
arahy.Tifrunner.gnm1.ann1.HT4698 Arachis hypogaea HOM05D005391 ORTHO05D006694 1.3e-26 124.0 229 42.8
Actinidia08882 Actinidia chinensis HOM05D005391 ORTHO05D006694 3.8e-26 122.5 152 52.0
HanXRQChr09g0273301 Helianthus annuus HOM05D005391 ORTHO05D006694 2.7e-24 116.3 156 48.1
SEGI_01116 Sequoiadendron giganteum HOM05D005391 ORTHO05D006694 1.3e-23 114.0 179 41.3
HPP92_023119 Vanilla planifolia HOM05D005391 ORTHO05D006694 1.8e-23 113.6 187 41.7
Sc04g0000550 Simmondsia chinensis HOM05D005391 ORTHO05D006694 1.5e-22 110.5 141 51.8
Ah.07g204620 Amaranthus hybridus HOM05D005391 ORTHO05D006694 1.9e-22 110.2 157 49.7
CSS0010891 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 8.1e-21 104.8 127 52.0
FAN23G2258 Fragaria x ananassa HOM05D005391 ORTHO05D006694 2.6e-19 99.8 154 46.8
Ca_01190_v3 Cicer arietinum L. HOM05D005391 ORTHO05D006694 2.5e-17 93.2 162 41.4
DCAR_021623 Daucus carota HOM05D005391 ORTHO05D006694 4.2e-17 92.4 183 36.6
Mapoly0007s0225 Marchantia polymorpha HOM05D005391 ORTHO05D006694 7.1e-17 91.7 175 38.3
FAN23G0903 Fragaria x ananassa HOM05D005391 ORTHO05D006694 6.0e-16 88.6 178 41.6
VMungo1309G0665 Vigna mungo HOM05D005391 ORTHO05D006694 8.7e-15 84.7 119 48.7
Pp3c7_3280 Physcomitrium patens HOM05D005391 ORTHO05D006694 5.7e-14 82.0 199 35.2
Os04g0388601 Oryza sativa ssp. japonica HOM05D005391 ORTHO05D006694 1.8e-12 77.0 165 42.4
SMO364G0653 Selaginella moellendorffii HOM05D005391 ORTHO05D006694 4.1e-12 75.9 174 30.5
Zm00001eb085410 Zea mays HOM05D005391 ORTHO05D006694 9.0e-12 74.7 120 45.8
AagrBONN_evm.TU.Sc2ySwM_369.268 Anthoceros agrestis HOM05D005391 ORTHO05D006694 2.6e-11 73.2 180 32.8
CSS0049043 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 7.6e-11 71.6 66 56.1
Gohir.1Z049409 Gossypium hirsutum HOM05D005391 ORTHO05D006694 3.8e-10 69.3 127 41.7
SEGI_13536 Sequoiadendron giganteum HOM05D005391 ORTHO05D006694 1.2e-08 64.3 157 32.5


User provided reference genes

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