Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold169G38600 Striga asiatica HOM05D007019 ORTHO05D008398 5.0e-253 877.5 505 100.0
Migut.E01445 Erythranthe guttata HOM05D007019 ORTHO05D008398 2.0e-169 599.7 512 65.8
unitig_46.g18223 Utricularia gibba HOM05D007019 ORTHO05D008398 1.0e-168 597.4 504 65.7
MSTRG.1627 Avicennia marina HOM05D007019 ORTHO05D008398 2.5e-164 582.8 510 64.7
CiPaw.07G232900 Carya illinoinensis HOM05D007019 ORTHO05D008398 1.0e-157 560.8 508 62.6
Oeu021907.1 Olea europaea HOM05D007019 ORTHO05D008398 8.2e-155 551.2 511 63.0
Cfa013011 Carpinus fangiana HOM05D007019 ORTHO05D008398 1.1e-154 550.8 510 61.0
CSS0016918 Camellia sinensis var. sinensis HOM05D007019 ORTHO05D008398 2.4e-154 549.7 511 61.1
CSS0023374 Camellia sinensis var. sinensis HOM05D007019 ORTHO05D008398 2.4e-154 549.7 511 61.1
Eucgr.C04032 Eucalyptus grandis HOM05D007019 ORTHO05D008398 4.1e-154 548.9 510 59.6
MBI14_g16432_MAGBIO Magnolia biondii HOM05D007019 ORTHO05D008398 1.2e-153 547.4 514 63.6
Manes.16G132200 Manihot esculenta HOM05D007019 ORTHO05D008398 2.0e-153 546.6 507 61.1
Actinidia14141 Actinidia chinensis HOM05D007019 ORTHO05D008398 1.0e-152 544.3 512 60.2
Prupe.1G396900 Prunus persica HOM05D007019 ORTHO05D008398 2.9e-152 542.7 513 62.0
Cc00_g05220 Coffea canephora HOM05D007019 ORTHO05D008398 6.5e-152 541.6 512 59.6
Lj7A737G40 Lonicera japonica HOM05D007019 ORTHO05D008398 6.5e-152 541.6 524 58.6
Potri.018G016200 Populus trichocarpa HOM05D007019 ORTHO05D008398 8.5e-152 541.2 511 59.1
CANSAT25G0065 Cannabis sativa HOM05D007019 ORTHO05D008398 6.1e-150 535.0 514 58.9
Rhsim02G0217600 Rhododendron simsii HOM05D007019 ORTHO05D008398 1.0e-149 534.3 512 61.3
CDE04G0815 Ceratophyllum demersum HOM05D007019 ORTHO05D008398 4.0e-149 532.3 510 60.8
TWI32G0429 Tripterygium wilfordii HOM05D007019 ORTHO05D008398 5.2e-149 531.9 511 59.5
Atru.chr7.2574 Acer truncatum HOM05D007019 ORTHO05D008398 6.7e-149 531.6 512 59.6
FvH4_2g41350 Fragaria vesca HOM05D007019 ORTHO05D008398 2.0e-148 530.0 506 59.1
arahy.Tifrunner.gnm1.ann1.MG10WM Arachis hypogaea HOM05D007019 ORTHO05D008398 4.4e-148 528.9 506 58.9
Solyc08g068820.3 Solanum lycopersicum HOM05D007019 ORTHO05D008398 5.7e-148 528.5 512 60.7
DCAR_003030 Daucus carota HOM05D007019 ORTHO05D008398 1.3e-147 527.3 510 59.2
Hma1.2p1_0737F.1_g210790 Hydrangea macrophylla HOM05D007019 ORTHO05D008398 1.3e-147 527.3 516 59.7
Aqoxy7G03288 Aquilegia oxysepala HOM05D007019 ORTHO05D008398 2.8e-147 526.2 511 60.7
QL02p018053 Quercus lobata HOM05D007019 ORTHO05D008398 4.8e-147 525.4 507 59.0
RcHm_v2.0_Chr6g0299181 Rosa chinensis HOM05D007019 ORTHO05D008398 1.1e-146 524.2 507 60.7
PGR044G2245 Punica granatum HOM05D007019 ORTHO05D008398 1.8e-146 523.5 513 59.8
arahy.Tifrunner.gnm1.ann1.SS16UG Arachis hypogaea HOM05D007019 ORTHO05D008398 1.2e-145 520.8 507 58.8
Psat5g174160 Pisum sativum HOM05D007019 ORTHO05D008398 1.2e-145 520.8 509 57.4
ATR0580G102 Amborella trichopoda HOM05D007019 ORTHO05D008398 2.7e-145 519.6 509 56.0
Nn6g33490 Nelumbo nucifera HOM05D007019 ORTHO05D008398 7.7e-145 518.1 525 60.0
Duzib168G1437 Durio zibethinus HOM05D007019 ORTHO05D008398 1.3e-144 517.3 517 57.8
ClCG08G013800 Citrullus lanatus HOM05D007019 ORTHO05D008398 5.0e-144 515.4 508 57.1
Glyma.18G091000 Glycine max HOM05D007019 ORTHO05D008398 5.0e-144 515.4 508 57.5
Lalb_Chr15g0081591 Lupinus albus HOM05D007019 ORTHO05D008398 5.0e-144 515.4 508 59.4
Lj6g0025581 Lotus japonicus HOM05D007019 ORTHO05D008398 6.5e-144 515.0 512 56.8
COL.COLO4_18972 Corchorus olitorius HOM05D007019 ORTHO05D008398 1.1e-143 514.2 516 58.1
Gorai.009G064200 Gossypium raimondii HOM05D007019 ORTHO05D008398 1.1e-143 514.2 513 58.1
Sp4g03850 Schrenkiella parvula HOM05D007019 ORTHO05D008398 1.1e-143 514.2 508 60.0
Glyma.08G321000 Glycine max HOM05D007019 ORTHO05D008398 5.5e-143 511.9 507 57.0
Ciclev10008089m.g Citrus clementina HOM05D007019 ORTHO05D008398 9.4e-143 511.1 512 57.4
HanXRQChr03g0084841 Helianthus annuus HOM05D007019 ORTHO05D008398 9.4e-143 511.1 533 55.0
PGSC0003DMG400014784 Solanum tuberosum HOM05D007019 ORTHO05D008398 9.4e-143 511.1 512 56.2
MELO3C011312.2 Cucumis melo HOM05D007019 ORTHO05D008398 2.1e-142 510.0 508 56.5
Thecc.09G013400 Theobroma cacao HOM05D007019 ORTHO05D008398 2.7e-142 509.6 515 57.7
FAN27G2994 Fragaria x ananassa HOM05D007019 ORTHO05D008398 8.8e-141 504.6 497 57.7
Gohir.D05G063200 Gossypium hirsutum HOM05D007019 ORTHO05D008398 1.2e-140 504.2 513 57.1
PSO210G0129 Papaver somniferum HOM05D007019 ORTHO05D008398 2.0e-140 503.4 510 57.5
PSO731G0070 Papaver somniferum HOM05D007019 ORTHO05D008398 2.0e-140 503.4 510 55.9
Carub.0004s0445 Capsella rubella HOM05D007019 ORTHO05D008398 2.2e-139 500.0 510 57.8
Sed0002524 Sechium edule HOM05D007019 ORTHO05D008398 2.2e-139 500.0 514 55.4
Cpa.g.sc148.46 Carica papaya HOM05D007019 ORTHO05D008398 8.3e-139 498.0 511 59.7
THA.LOC104819948 Tarenaya hassleriana HOM05D007019 ORTHO05D008398 8.3e-139 498.0 516 58.3
Medtr3g053700 Medicago truncatula HOM05D007019 ORTHO05D008398 1.8e-138 496.9 507 55.8
CsaV3_2G032590 Cucumis sativus L. HOM05D007019 ORTHO05D008398 3.1e-138 496.1 508 55.3
BraA09t41004Z Brassica rapa HOM05D007019 ORTHO05D008398 4.1e-138 495.7 509 60.1
Lsat_1_v5_gn_6_78060 Lactuca sativa HOM05D007019 ORTHO05D008398 4.1e-138 495.7 516 56.8
CAN.G273.24 Capsicum annuum HOM05D007019 ORTHO05D008398 5.4e-138 495.4 508 55.7
Gohir.A05G061000 Gossypium hirsutum HOM05D007019 ORTHO05D008398 7.0e-138 495.0 513 56.7
VMungo0540G1233 Vigna mungo HOM05D007019 ORTHO05D008398 2.0e-137 493.4 507 56.0
Phvul.006G047900 Phaseolus vulgaris HOM05D007019 ORTHO05D008398 3.5e-137 492.7 508 55.7
Zm00001eb257650 Zea mays HOM05D007019 ORTHO05D008398 1.0e-136 491.1 509 56.4
Thhalv10000137m.g Eutrema salsugineum HOM05D007019 ORTHO05D008398 1.7e-136 490.3 510 56.3
A09p56090 Brassica napus HOM05D007019 ORTHO05D008398 1.9e-135 486.9 509 59.1
ECA240G4302 Erigeron canadensis HOM05D007019 ORTHO05D008398 2.5e-135 486.5 529 52.6
CARHR294580 Cardamine hirsuta HOM05D007019 ORTHO05D008398 2.1e-134 483.4 512 59.2
Ca_26389_v3 Cicer arietinum L. HOM05D007019 ORTHO05D008398 2.1e-134 483.4 506 55.7
Hund25606 Selenicereus undatus HOM05D007019 ORTHO05D008398 2.1e-134 483.4 525 54.1
Sabra18G0019700 Salix brachista HOM05D007019 ORTHO05D008398 2.7e-134 483.0 541 53.4
C08p39020 Brassica napus HOM05D007019 ORTHO05D008398 6.1e-134 481.9 507 58.6
AT2G24830 Arabidopsis thaliana HOM05D007019 ORTHO05D008398 8.0e-134 481.5 507 57.4
BolC8t51475H Brassica oleracea HOM05D007019 ORTHO05D008398 8.0e-134 481.5 506 58.1
EL10Ac2g02454 Beta vulgaris HOM05D007019 ORTHO05D008398 2.3e-133 479.9 559 51.7
TPR.G32253 Trifolium pratense HOM05D007019 ORTHO05D008398 2.3e-133 479.9 510 54.1
A09p56030 Brassica napus HOM05D007019 ORTHO05D008398 4.0e-133 479.2 506 58.3
Aa31LG7G11570 Aethionema arabicum HOM05D007019 ORTHO05D008398 8.8e-133 478.0 512 55.9
Sc23g0006120 Simmondsia chinensis HOM05D007019 ORTHO05D008398 1.2e-129 467.6 526 57.6
FAN15G0718 Fragaria x ananassa HOM05D007019 ORTHO05D008398 9.5e-127 458.0 523 52.8
BcaC07g40903 Brassica carinata HOM05D007019 ORTHO05D008398 1.6e-126 457.2 506 57.1
AUR62024776 Chenopodium quinoa HOM05D007019 ORTHO05D008398 2.8e-126 456.4 550 52.5
HPP92_010745 Vanilla planifolia HOM05D007019 ORTHO05D008398 6.1e-126 455.3 511 50.7
Nitab4.5_0000406g0110 Nicotiana tabacum HOM05D007019 ORTHO05D008398 4.0e-125 452.6 510 52.5
AUR62032443 Chenopodium quinoa HOM05D007019 ORTHO05D008398 7.5e-124 448.4 532 52.1
AL4G15870 Arabidopsis lyrata HOM05D007019 ORTHO05D008398 2.9e-123 446.4 507 53.5
Nitab4.5_0012106g0030 Nicotiana tabacum HOM05D007019 ORTHO05D008398 1.4e-122 444.1 512 56.2
Sopen08g022560 Solanum pennellii HOM05D007019 ORTHO05D008398 1.8e-122 443.7 413 58.8
vmacro11274 Vaccinium macrocarpon HOM05D007019 ORTHO05D008398 1.7e-112 410.6 511 50.1
TAR636G0280 Trochodendron aralioides HOM05D007019 ORTHO05D008398 9.5e-111 404.8 360 59.7
SEGI_04420 Sequoiadendron giganteum HOM05D007019 ORTHO05D008398 7.5e-108 395.2 520 47.5
Dinv03401 Davidia involucrata HOM05D007019 ORTHO05D008398 1.5e-100 370.9 376 59.8
Pp3c21_5730 Physcomitrium patens HOM05D007019 ORTHO05D008398 1.2e-97 361.3 530 40.9
MD08G1051900 Malus domestica HOM05D007019 ORTHO05D008398 8.6e-96 355.1 370 58.9
Mapoly0067s0020 Marchantia polymorpha HOM05D007019 ORTHO05D008398 3.3e-95 353.2 526 43.7
SMO116G0382 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 2.0e-92 344.0 511 45.4
Hma1.2p1_0737F.1_g210800 Hydrangea macrophylla HOM05D007019 ORTHO05D008398 9.9e-84 315.1 345 55.7
SHI21092 Sapria himalayana HOM05D007019 ORTHO05D008398 1.4e-77 294.7 753 31.9
Dinv10229 Davidia involucrata HOM05D007019 ORTHO05D008398 2.2e-67 260.8 366 49.2
GSVIVG01036005001 Vitis vinifera HOM05D007019 ORTHO05D008398 2.3e-64 250.8 187 66.3
AagrBONN_evm.TU.Sc2ySwM_117.1463 Anthoceros agrestis HOM05D007019 ORTHO05D008398 3.6e-57 226.9 369 44.4
CBR_g30106 Chara braunii HOM05D007019 ORTHO05D008398 1.0e-56 225.3 576 34.4
SalBow6G1623 Salvia bowleyana HOM05D007019 ORTHO05D008398 1.7e-38 164.9 201 52.2
Peaxi162Scf01419g00115 Petunia axillaris HOM05D007019 ORTHO05D008398 1.6e-36 158.3 142 57.0
SMO116G0105 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 2.2e-30 137.9 321 34.6
Os02g0793000 Oryza sativa ssp. japonica HOM05D007019 ORTHO05D008398 1.4e-24 118.6 106 53.8
SMO269G0003 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 3.1e-21 107.5 321 31.5
AagrBONN_evm.TU.Sc2ySwM_117.1462 Anthoceros agrestis HOM05D007019 ORTHO05D008398 8.6e-19 99.4 149 42.3
Glyma.13G156900 Glycine max HOM05D004574 ORTHO05D005612 6.8e-08 63.2 83 48.2
Glyma.17G104500 Glycine max HOM05D004574 ORTHO05D005612 1.5e-07 62.0 86 47.7
CSS0028433 Camellia sinensis var. sinensis HOM05D004574 ORTHO05D005612 9.8e-07 59.3 62 46.8
Actinidia04251 Actinidia chinensis HOM05D004574 ORTHO05D005612 1.3e-06 58.9 82 43.9
CANSAT11G2415 Cannabis sativa HOM05D004574 ORTHO05D005612 2.2e-06 58.2 71 42.3
Lsat_1_v5_gn_5_90461 Lactuca sativa HOM05D004574 ORTHO05D005612 2.9e-06 57.8 49 57.1
Nn2g12259 Nelumbo nucifera HOM05D004574 ORTHO05D005612 2.9e-06 57.8 69 44.9
Oeu040778.1 Olea europaea HOM05D004574 ORTHO05D005612 6.4e-06 56.6 66 48.5
HanXRQChr12g0357011 Helianthus annuus HOM05D004574 ORTHO05D005612 8.3e-06 56.2 62 45.2


User provided reference genes

Program Settings