Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold168G38576 Striga asiatica HOM05D005351 ORTHO05D006542 0.0e+00 1473.0 783 100.0
SalBow8G3039 Salvia bowleyana HOM05D005351 ORTHO05D006542 3.9e-180 636.0 809 51.2
MSTRG.15808 Avicennia marina HOM05D005351 ORTHO05D006542 3.6e-173 612.8 804 51.5
Migut.M01635 Erythranthe guttata HOM05D005351 ORTHO05D006542 4.1e-169 599.4 795 50.6
Oeu049420.1 Olea europaea HOM05D005351 ORTHO05D006542 1.5e-139 501.1 836 43.8
RcHm_v2.0_Chr5g0075571 Rosa chinensis HOM05D005351 ORTHO05D006542 5.8e-123 446.0 830 41.1
CSS0045517 Camellia sinensis var. sinensis HOM05D005351 ORTHO05D006542 1.3e-122 444.9 868 41.1
CSS0029070 Camellia sinensis var. sinensis HOM05D005351 ORTHO05D006542 1.7e-122 444.5 868 41.1
Haze_09867 Corylus avellana HOM05D005351 ORTHO05D006542 1.7e-122 444.5 844 41.0
Cc05_g15290 Coffea canephora HOM05D005351 ORTHO05D006542 2.4e-121 440.7 825 42.4
Cfa021891 Carpinus fangiana HOM05D005351 ORTHO05D006542 2.1e-120 437.6 839 40.4
Potri.001G371600 Populus trichocarpa HOM05D005351 ORTHO05D006542 9.5e-118 428.7 860 41.9
Nitab4.5_0005478g0030 Nicotiana tabacum HOM05D005351 ORTHO05D006542 2.8e-117 427.2 778 42.5
Prupe.6G028400 Prunus persica HOM05D005351 ORTHO05D006542 8.1e-117 425.6 847 38.1
Nitab4.5_0003328g0090 Nicotiana tabacum HOM05D005351 ORTHO05D006542 3.1e-116 423.7 786 43.0
CiPaw.12G140700 Carya illinoinensis HOM05D005351 ORTHO05D006542 5.2e-116 422.9 783 41.8
Sabra16G0244200 Salix brachista HOM05D005351 ORTHO05D006542 1.2e-115 421.8 849 40.6
unitig_0.g707 Utricularia gibba HOM05D005351 ORTHO05D006542 1.5e-115 421.4 805 40.9
PGSC0003DMG400014404 Solanum tuberosum HOM05D005351 ORTHO05D006542 4.4e-115 419.9 811 41.1
FAN21G2745 Fragaria x ananassa HOM05D005351 ORTHO05D006542 1.7e-114 417.9 810 39.0
Actinidia03651 Actinidia chinensis HOM05D005351 ORTHO05D006542 3.8e-114 416.8 829 40.5
Manes.01G003500 Manihot esculenta HOM05D005351 ORTHO05D006542 8.4e-114 415.6 814 40.4
FAN11G1247 Fragaria x ananassa HOM05D005351 ORTHO05D006542 1.1e-113 415.2 812 38.9
FAN16G2746 Fragaria x ananassa HOM05D005351 ORTHO05D006542 5.4e-113 412.9 817 38.6
Sopen10g001810 Solanum pennellii HOM05D005351 ORTHO05D006542 9.2e-113 412.1 789 41.4
FAN25G1298 Fragaria x ananassa HOM05D005351 ORTHO05D006542 1.2e-112 411.8 814 38.0
Solyc10g005850.4 Solanum lycopersicum HOM05D005351 ORTHO05D006542 4.6e-112 409.8 798 41.4
Duzib213G0009 Durio zibethinus HOM05D005351 ORTHO05D006542 5.6e-110 402.9 846 39.0
Peaxi162Scf00018g00155 Petunia axillaris HOM05D005351 ORTHO05D006542 9.6e-110 402.1 820 39.9
Rhsim04G0010500 Rhododendron simsii HOM05D005351 ORTHO05D006542 6.2e-109 399.4 806 39.5
MD03G1035400 Malus domestica HOM05D005351 ORTHO05D006542 1.4e-108 398.3 850 38.2
QL08p002685 Quercus lobata HOM05D005351 ORTHO05D006542 1.4e-108 398.3 842 39.1
Nn1g02046 Nelumbo nucifera HOM05D005351 ORTHO05D006542 1.8e-108 397.9 844 38.7
CAN.G492.50 Capsicum annuum HOM05D005351 ORTHO05D006542 1.5e-107 394.8 824 39.9
MD11G1037100 Malus domestica HOM05D005351 ORTHO05D006542 3.8e-106 390.2 856 37.7
TAR626G0279 Trochodendron aralioides HOM05D005351 ORTHO05D006542 4.9e-106 389.8 865 38.7
Dinv40885 Davidia involucrata HOM05D005351 ORTHO05D006542 8.4e-106 389.0 835 40.2
COL.COLO4_07741 Corchorus olitorius HOM05D005351 ORTHO05D006542 7.1e-105 386.0 833 38.7
Lj6g0009098 Lotus japonicus HOM05D005351 ORTHO05D006542 6.0e-104 382.9 847 39.8
VMungo0540G1402 Vigna mungo HOM05D005351 ORTHO05D006542 7.8e-104 382.5 808 40.3
Gorai.009G450800 Gossypium raimondii HOM05D005351 ORTHO05D006542 7.3e-102 375.9 846 38.5
TWI38G2212 Tripterygium wilfordii HOM05D005351 ORTHO05D006542 9.6e-102 375.6 819 38.5
GSVIVG01014743001 Vitis vinifera HOM05D005351 ORTHO05D006542 1.6e-101 374.8 799 37.3
Gohir.A04G005700 Gossypium hirsutum HOM05D005351 ORTHO05D006542 4.8e-101 373.2 846 39.1
Nn3g19476 Nelumbo nucifera HOM05D005351 ORTHO05D006542 1.4e-100 371.7 842 38.6
Gohir.D05G384000 Gossypium hirsutum HOM05D005351 ORTHO05D006542 1.8e-100 371.3 849 38.2
Phvul.006G059260 Phaseolus vulgaris HOM05D005351 ORTHO05D006542 3.4e-99 367.1 841 38.9
CsaV3_7G023840 Cucumis sativus L. HOM05D005351 ORTHO05D006542 7.6e-99 365.9 838 37.8
HanXRQChr11g0334131 Helianthus annuus HOM05D005351 ORTHO05D006542 7.6e-99 365.9 790 38.2
CANSAT11G0508 Cannabis sativa HOM05D005351 ORTHO05D006542 9.9e-99 365.5 843 38.1
Lj8A180G96 Lonicera japonica HOM05D005351 ORTHO05D006542 3.8e-98 363.6 848 39.5
Psat5g166400 Pisum sativum HOM05D005351 ORTHO05D006542 1.4e-97 361.7 818 39.1
Ciclev10007493m.g Citrus clementina HOM05D005351 ORTHO05D006542 1.2e-96 358.6 835 38.7
Eucgr.F02026 Eucalyptus grandis HOM05D005351 ORTHO05D006542 1.2e-96 358.6 836 39.0
Glyma.08G332700 Glycine max HOM05D005351 ORTHO05D006542 2.1e-96 357.8 840 38.0
Medtr3g461030 Medicago truncatula HOM05D005351 ORTHO05D006542 3.5e-96 357.1 842 37.8
PGR083G0334 Punica granatum HOM05D005351 ORTHO05D006542 7.9e-96 355.9 761 39.3
Sed0019267 Sechium edule HOM05D005351 ORTHO05D006542 1.8e-95 354.8 823 38.5
DCAR_013254 Daucus carota HOM05D005351 ORTHO05D006542 6.7e-95 352.8 772 38.9
Lalb_Chr15g0082311 Lupinus albus HOM05D005351 ORTHO05D006542 2.1e-93 347.8 847 37.5
PSO210G4843 Papaver somniferum HOM05D005351 ORTHO05D006542 3.7e-93 347.1 781 38.5
Glyma.18G074300 Glycine max HOM05D005351 ORTHO05D006542 8.1e-93 345.9 842 36.9
PSO210G4950 Papaver somniferum HOM05D005351 ORTHO05D006542 1.8e-92 344.7 784 38.5
TWI38G1324 Tripterygium wilfordii HOM05D005351 ORTHO05D006542 2.4e-92 344.4 828 37.3
Thecc.07G007900 Theobroma cacao HOM05D005351 ORTHO05D006542 1.2e-91 342.0 839 36.1
Ca_12455_v3 Cicer arietinum L. HOM05D005351 ORTHO05D006542 4.5e-91 340.1 833 37.7
Aqoxy1G04296 Aquilegia oxysepala HOM05D005351 ORTHO05D006542 1.3e-90 338.6 838 35.6
THA.LOC104815687 Tarenaya hassleriana HOM05D005351 ORTHO05D006542 1.1e-89 335.5 806 35.5
vmacro09623 Vaccinium macrocarpon HOM05D005351 ORTHO05D006542 1.9e-89 334.7 803 37.6
ECA236G3149 Erigeron canadensis HOM05D005351 ORTHO05D006542 2.7e-88 330.9 805 36.9
AUR62035679 Chenopodium quinoa HOM05D005351 ORTHO05D006542 8.7e-87 325.9 812 38.5
TPR.G17956 Trifolium pratense HOM05D005351 ORTHO05D006542 4.3e-86 323.6 856 36.7
Hund23091 Selenicereus undatus HOM05D005351 ORTHO05D006542 5.6e-86 323.2 819 35.4
ClCG09G021540 Citrullus lanatus HOM05D005351 ORTHO05D006542 2.1e-85 321.2 929 33.7
EL10Ac4g07541 Beta vulgaris HOM05D005351 ORTHO05D006542 8.2e-85 319.3 810 38.0
AT3G13225 Arabidopsis thaliana HOM05D005351 ORTHO05D006542 1.8e-84 318.2 817 36.2
Dinv10362 Davidia involucrata HOM05D005351 ORTHO05D006542 3.1e-84 317.4 696 39.4
ATR0751G017 Amborella trichopoda HOM05D005351 ORTHO05D006542 9.0e-84 315.8 855 35.4
Atru.chr2.3836 Acer truncatum HOM05D005351 ORTHO05D006542 1.2e-83 315.5 771 38.4
Cpa.g.sc12.108 Carica papaya HOM05D005351 ORTHO05D006542 3.4e-83 313.9 747 37.8
FvH4_3g42241 Fragaria vesca HOM05D005351 ORTHO05D006542 3.4e-83 313.9 744 36.4
AUR62017130 Chenopodium quinoa HOM05D005351 ORTHO05D006542 1.0e-82 312.4 828 36.6
AL3G25030 Arabidopsis lyrata HOM05D005351 ORTHO05D006542 9.3e-81 305.8 770 35.3
BolC1t05130H Brassica oleracea HOM05D005351 ORTHO05D006542 2.5e-78 297.7 800 35.8
BcaC09g48295 Brassica carinata HOM05D005351 ORTHO05D006542 4.3e-78 297.0 800 35.8
CARHR087840 Cardamine hirsuta HOM05D005351 ORTHO05D006542 4.3e-78 297.0 797 33.6
Carub.0003s1261 Capsella rubella HOM05D005351 ORTHO05D006542 1.3e-77 295.4 776 35.8
MBI14_g37362_MAGBIO Magnolia biondii HOM05D005351 ORTHO05D006542 6.9e-76 289.7 828 32.4
Thhalv10020110m.g Eutrema salsugineum HOM05D005351 ORTHO05D006542 9.0e-76 289.3 775 34.7
C01p51820 Brassica napus HOM05D005351 ORTHO05D006542 1.2e-75 288.9 816 36.0
Ah.06g181500 Amaranthus hybridus HOM05D005351 ORTHO05D006542 6.5e-74 283.1 804 34.1
Aa31LG8G460 Aethionema arabicum HOM05D005351 ORTHO05D006542 5.5e-73 280.0 761 34.3
Sp3g11430 Schrenkiella parvula HOM05D005351 ORTHO05D006542 1.2e-72 278.9 825 34.3
arahy.Tifrunner.gnm1.ann1.1R5J8M Arachis hypogaea HOM05D005351 ORTHO05D006542 2.7e-72 277.7 819 34.6
Sc03g0011530 Simmondsia chinensis HOM05D005351 ORTHO05D006542 2.7e-72 277.7 718 38.6
BcaB04g21006 Brassica carinata HOM05D005351 ORTHO05D006542 7.9e-72 276.2 805 35.2
Os06g0298400 Oryza sativa ssp. japonica HOM05D005351 ORTHO05D006542 4.3e-70 270.4 801 35.7
Hma1.2p1_0193F.1_g083920 Hydrangea macrophylla HOM05D005351 ORTHO05D006542 5.7e-70 270.0 887 31.9
BraA01t04066Z Brassica rapa HOM05D005351 ORTHO05D006542 1.3e-69 268.9 809 33.6
A01p40300 Brassica napus HOM05D005351 ORTHO05D006542 3.7e-69 267.3 805 33.8
HPP92_017874 Vanilla planifolia HOM05D005351 ORTHO05D006542 5.5e-65 253.4 797 33.0
arahy.Tifrunner.gnm1.ann1.LDHF9L Arachis hypogaea HOM05D005351 ORTHO05D006542 1.7e-61 241.9 826 32.7
SEGI_31992 Sequoiadendron giganteum HOM05D005351 ORTHO05D006542 2.2e-61 241.5 935 32.3
CDE05G2589 Ceratophyllum demersum HOM05D005351 ORTHO05D006542 3.7e-61 240.7 822 31.4
MELO3C024969.2 Cucumis melo HOM05D005351 ORTHO05D006542 2.0e-59 235.0 740 34.3
Zm00001eb381020 Zea mays HOM05D005351 ORTHO05D006542 5.9e-59 233.4 800 31.8
Lsat_1_v5_gn_7_114900 Lactuca sativa HOM05D005351 ORTHO05D006542 6.1e-56 223.4 807 32.8
CDE05G0998 Ceratophyllum demersum HOM05D005351 ORTHO05D006542 1.0e-55 222.6 762 31.4
PSO782G2183 Papaver somniferum HOM05D005351 ORTHO05D006542 7.0e-52 209.9 155 71.6
Zm00001eb281160 Zea mays HOM05D005351 ORTHO05D006542 1.6e-51 208.8 749 32.2
Oeu017994.1 Olea europaea HOM05D005351 ORTHO05D006542 2.0e-51 208.4 255 51.0
MBI14_g27041_MAGBIO Magnolia biondii HOM05D005351 ORTHO05D006542 8.5e-42 176.4 156 61.5
AagrBONN_evm.TU.Sc2ySwM_368.1722__1723 Anthoceros agrestis HOM05D005351 ORTHO05D006542 1.6e-40 172.2 884 27.8
Actinidia00844 Actinidia chinensis HOM05D005351 ORTHO05D006542 5.4e-36 157.1 442 35.7
CBR_g12012 Chara braunii HOM05D005351 ORTHO05D006542 4.2e-33 147.5 206 47.6
Pp3c7_8580 Physcomitrium patens HOM05D005351 ORTHO05D006542 6.1e-32 143.7 252 43.7
CSS0028997 Camellia sinensis var. sinensis HOM05D005351 ORTHO05D006542 1.8e-28 132.1 344 30.8
CSS0030315 Camellia sinensis var. sinensis HOM05D005351 ORTHO05D006542 1.8e-28 132.1 344 31.1
SMO164G0196 Selaginella moellendorffii HOM05D005351 ORTHO05D006542 4.5e-27 127.5 159 48.4
HPP92_028497 Vanilla planifolia HOM05D005351 ORTHO05D006542 3.6e-24 117.9 159 44.0
vmacro11082 Vaccinium macrocarpon HOM05D000009 ORTHO05D006542 7.5e-22 110.2 97 62.9
Oeu017995.1 Olea europaea HOM05D005351 ORTHO05D006542 1.7e-21 109.0 261 32.6
AagrBONN_evm.TU.Sc2ySwM_368.1723 Anthoceros agrestis HOM05D005351 ORTHO05D006542 1.7e-18 99.0 815 25.6
Dinv10361 Davidia involucrata HOM05D005351 ORTHO05D006542 1.5e-17 95.9 73 60.3
Hma1.2p1_3473F.1_g336240 Hydrangea macrophylla HOM05D005351 ORTHO05D006542 9.5e-17 93.2 296 34.5
Cre09.g388430 Chlamydomonas reinhardtii HOM05D005351 ORTHO05D006542 5.8e-14 84.0 190 35.3
PSO782G1978 Papaver somniferum HOM05D005351 ORTHO05D006542 1.4e-12 79.3 435 29.9
Lsat_1_v5_gn_6_88041 Lactuca sativa HOM05D005351 ORTHO05D006542 1.6e-08 65.9 101 37.6
Cc00_g23250 Coffea canephora HOM05D000874 ORTHO05D001049 5.8e-06 57.4 31 74.2
MCO09G310 Micromonas commoda HOM05D005351 ORTHO05D006542 9.9e-06 56.6 207 26.6


User provided reference genes

Program Settings