Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold168G38552 Striga asiatica HOM05D005199 ORTHO05D006277 6.8e-198 693.7 334 100.0
Potri.015G106900 Populus trichocarpa HOM05D005199 ORTHO05D006277 3.9e-113 412.1 355 62.8
Sabra15G0127400 Salix brachista HOM05D005199 ORTHO05D006277 5.1e-113 411.8 343 64.1
Sabra15G0129500 Salix brachista HOM05D005199 ORTHO05D006277 5.1e-113 411.8 343 64.1
ECA232G4131 Erigeron canadensis HOM05D005199 ORTHO05D006277 1.1e-112 410.6 357 61.9
MD06G1129500 Malus domestica HOM05D005199 ORTHO05D006277 1.1e-112 410.6 360 61.7
Cc04_g05820 Coffea canephora HOM05D005199 ORTHO05D006277 9.7e-112 407.5 343 63.8
Ciclev10033942m.g Citrus clementina HOM05D005199 ORTHO05D006277 1.7e-111 406.8 353 61.2
CiPaw.12G000800 Carya illinoinensis HOM05D005199 ORTHO05D006277 1.1e-110 404.1 354 60.7
Cfa018703 Carpinus fangiana HOM05D005199 ORTHO05D006277 4.1e-110 402.1 318 64.8
QL10p000401 Quercus lobata HOM05D005199 ORTHO05D006277 1.3e-108 397.1 343 61.2
HanXRQChr09g0273821 Helianthus annuus HOM05D005199 ORTHO05D006277 3.8e-108 395.6 346 61.6
Glyma.06G163600 Glycine max HOM05D005199 ORTHO05D006277 4.2e-107 392.1 343 61.2
Oeu013661.1 Olea europaea HOM05D005199 ORTHO05D006277 9.4e-107 391.0 336 60.7
DCAR_016338 Daucus carota HOM05D005199 ORTHO05D006277 1.2e-106 390.6 331 61.6
Thecc.03G141200 Theobroma cacao HOM05D005199 ORTHO05D006277 1.2e-106 390.6 329 62.6
Dinv13715 Davidia involucrata HOM05D005199 ORTHO05D006277 1.6e-106 390.2 344 61.0
Prupe.5G140700 Prunus persica HOM05D005199 ORTHO05D006277 2.7e-106 389.4 351 59.0
TWI39G0590 Tripterygium wilfordii HOM05D005199 ORTHO05D006277 2.7e-106 389.4 344 61.0
Manes.06G127100 Manihot esculenta HOM05D005199 ORTHO05D006277 8.0e-106 387.9 343 59.2
Lsat_1_v5_gn_4_84380 Lactuca sativa HOM05D005199 ORTHO05D006277 1.0e-105 387.5 344 60.5
Nitab4.5_0011600g0020 Nicotiana tabacum HOM05D005199 ORTHO05D006277 1.0e-105 387.5 346 59.2
Medtr3g098560 Medicago truncatula HOM05D005199 ORTHO05D006277 1.8e-105 386.7 339 60.8
Ca_10877_v3 Cicer arietinum L. HOM05D005199 ORTHO05D006277 2.3e-105 386.3 339 61.1
Duzib205G1536 Durio zibethinus HOM05D005199 ORTHO05D006277 2.3e-105 386.3 336 59.8
Nitab4.5_0000976g0090 Nicotiana tabacum HOM05D005199 ORTHO05D006277 4.0e-105 385.6 374 56.4
Cpa.g.sc13.181 Carica papaya HOM05D005199 ORTHO05D006277 1.1e-104 384.0 313 63.6
CAN.G843.7 Capsicum annuum HOM05D005199 ORTHO05D006277 1.5e-104 383.6 367 57.2
CSS0050347 Camellia sinensis var. sinensis HOM05D005199 ORTHO05D006277 2.6e-104 382.9 343 58.9
Atru.chr6.1926 Acer truncatum HOM05D005199 ORTHO05D006277 3.3e-104 382.5 347 58.2
Haze_07093 Corylus avellana HOM05D005199 ORTHO05D006277 3.3e-104 382.5 341 60.1
Duzib084G1266 Durio zibethinus HOM05D005199 ORTHO05D006277 3.3e-104 382.5 335 60.0
MD14G1146700 Malus domestica HOM05D005199 ORTHO05D006277 3.3e-104 382.5 357 58.5
CDE06G1181 Ceratophyllum demersum HOM05D005199 ORTHO05D006277 5.7e-104 381.7 339 59.0
DCAR_025645 Daucus carota HOM05D005199 ORTHO05D006277 5.7e-104 381.7 337 59.9
Psat5g056040 Pisum sativum HOM05D005199 ORTHO05D006277 5.7e-104 381.7 339 60.5
GSVIVG01008655001 Vitis vinifera HOM05D005199 ORTHO05D006277 5.7e-104 381.7 336 60.7
Nn3g16267 Nelumbo nucifera HOM05D005199 ORTHO05D006277 9.7e-104 380.9 343 59.8
CDE02G3820 Ceratophyllum demersum HOM05D005199 ORTHO05D006277 3.7e-103 379.0 339 59.3
ClCG06G018380 Citrullus lanatus HOM05D005199 ORTHO05D006277 3.7e-103 379.0 349 58.2
Peaxi162Scf00314g00633 Petunia axillaris HOM05D005199 ORTHO05D006277 4.8e-103 378.6 376 56.1
Aa31LG11G1640 Aethionema arabicum HOM05D005199 ORTHO05D006277 1.4e-102 377.1 346 58.7
BcaC01g02441 Brassica carinata HOM05D005199 ORTHO05D006277 1.4e-102 377.1 350 58.3
Phvul.009G160900 Phaseolus vulgaris HOM05D005199 ORTHO05D006277 1.4e-102 377.1 340 59.4
SalBow7G2845 Salvia bowleyana HOM05D005199 ORTHO05D006277 1.4e-102 377.1 352 57.7
SGA_v2.0_scaffold37G14675 Striga asiatica HOM05D005199 ORTHO05D006277 2.4e-102 376.3 346 57.5
Rhsim08G0198200 Rhododendron simsii HOM05D005199 ORTHO05D006277 3.1e-102 375.9 338 58.6
Sed0007314 Sechium edule HOM05D005199 ORTHO05D006277 3.1e-102 375.9 353 55.5
VMungo1309G0841 Vigna mungo HOM05D005199 ORTHO05D006277 3.1e-102 375.9 349 57.9
Eucgr.K02192 Eucalyptus grandis HOM05D005199 ORTHO05D006277 7.0e-102 374.8 338 57.4
Gohir.A07G046500 Gossypium hirsutum HOM05D005199 ORTHO05D006277 7.0e-102 374.8 342 58.8
Lj1g0022547 Lotus japonicus HOM05D005199 ORTHO05D006277 7.0e-102 374.8 337 59.1
TAR374G0192 Trochodendron aralioides HOM05D005199 ORTHO05D006277 9.1e-102 374.4 325 61.2
TWI14G0958 Tripterygium wilfordii HOM05D005199 ORTHO05D006277 1.2e-101 374.0 334 61.4
Actinidia25514 Actinidia chinensis HOM05D005199 ORTHO05D006277 1.6e-101 373.6 332 59.0
A06p28520 Brassica napus HOM05D005199 ORTHO05D006277 1.6e-101 373.6 354 57.6
BraA06t25798Z Brassica rapa HOM05D005199 ORTHO05D006277 1.6e-101 373.6 354 57.6
EL10Ac5g11279 Beta vulgaris HOM05D005199 ORTHO05D006277 2.0e-101 373.2 397 53.4
C03p65260 Brassica napus HOM05D005199 ORTHO05D006277 2.0e-101 373.2 358 57.0
BolC3t18779H Brassica oleracea HOM05D005199 ORTHO05D006277 2.0e-101 373.2 358 57.0
Manes.14G044200 Manihot esculenta HOM05D005199 ORTHO05D006277 2.0e-101 373.2 333 58.3
Sopen03g037080 Solanum pennellii HOM05D005199 ORTHO05D006277 2.0e-101 373.2 356 58.1
arahy.Tifrunner.gnm1.ann1.33WSUR Arachis hypogaea HOM05D005199 ORTHO05D006277 4.5e-101 372.1 350 58.6
Dinv23231 Davidia involucrata HOM05D005199 ORTHO05D006277 4.5e-101 372.1 351 57.8
Migut.I00669 Erythranthe guttata HOM05D005199 ORTHO05D006277 4.5e-101 372.1 355 56.6
arahy.Tifrunner.gnm1.ann1.P6GRAY Arachis hypogaea HOM05D005199 ORTHO05D006277 5.9e-101 371.7 349 57.6
Hma1.2p1_0577F.1_g182220 Hydrangea macrophylla HOM05D005199 ORTHO05D006277 7.7e-101 371.3 322 60.9
CsaV3_1G000050 Cucumis sativus L. HOM05D005199 ORTHO05D006277 1.0e-100 370.9 344 57.3
Gohir.D07G050800 Gossypium hirsutum HOM05D005199 ORTHO05D006277 1.0e-100 370.9 342 57.0
SHI14097 Sapria himalayana HOM05D005199 ORTHO05D006277 1.7e-100 370.2 393 53.2
vmacro19190 Vaccinium macrocarpon HOM05D005199 ORTHO05D006277 1.7e-100 370.2 336 58.3
MELO3C026157.2 Cucumis melo HOM05D005199 ORTHO05D006277 3.8e-100 369.0 347 56.8
THA.LOC104801769 Tarenaya hassleriana HOM05D005199 ORTHO05D006277 5.0e-100 368.6 348 55.7
Sc22g0003300 Simmondsia chinensis HOM05D005199 ORTHO05D006277 8.5e-100 367.9 365 55.6
MBI10_g44970_MAGBIO Magnolia biondii HOM05D005199 ORTHO05D006277 1.9e-99 366.7 341 56.9
THA.LOC104818285 Tarenaya hassleriana HOM05D005199 ORTHO05D006277 2.5e-99 366.3 329 57.8
BcaB02g09607 Brassica carinata HOM05D005199 ORTHO05D006277 4.2e-99 365.5 361 54.6
arahy.Tifrunner.gnm1.ann1.4TKD14 Arachis hypogaea HOM05D005199 ORTHO05D006277 5.5e-99 365.2 348 56.9
Gorai.001G053900 Gossypium raimondii HOM05D005199 ORTHO05D006277 9.4e-99 364.4 342 56.4
PGR102G3000 Punica granatum HOM05D005199 ORTHO05D006277 9.4e-99 364.4 327 57.8
AUR62032216 Chenopodium quinoa HOM05D005199 ORTHO05D006277 2.1e-98 363.2 345 56.2
AT5G61850 Arabidopsis thaliana HOM05D005199 ORTHO05D006277 3.6e-98 362.5 353 55.5
BcaB07g29818 Brassica carinata HOM05D005199 ORTHO05D006277 4.7e-98 362.1 355 54.9
arahy.Tifrunner.gnm1.ann1.31D2RV Arachis hypogaea HOM05D005199 ORTHO05D006277 6.1e-98 361.7 315 61.6
Sp2g25050 Schrenkiella parvula HOM05D005199 ORTHO05D006277 6.1e-98 361.7 355 55.5
Ah.02g114560 Amaranthus hybridus HOM05D005199 ORTHO05D006277 1.4e-97 360.5 362 54.7
Thhalv10005606m.g Eutrema salsugineum HOM05D005199 ORTHO05D006277 1.5e-96 357.1 346 56.1
BolC2t12224H Brassica oleracea HOM05D005199 ORTHO05D006277 3.4e-96 355.9 353 54.7
BraA02t09114Z Brassica rapa HOM05D005199 ORTHO05D006277 7.5e-96 354.8 353 54.7
BcaC03g18101 Brassica carinata HOM05D005199 ORTHO05D006277 1.7e-95 353.6 353 54.4
C02p61660 Brassica napus HOM05D005199 ORTHO05D006277 1.7e-95 353.6 353 54.4
AL8G38620 Arabidopsis lyrata HOM05D005199 ORTHO05D006277 2.8e-95 352.8 355 53.8
Aqoxy5G03105 Aquilegia oxysepala HOM05D005199 ORTHO05D006277 3.7e-95 352.4 333 56.8
A02p41740 Brassica napus HOM05D005199 ORTHO05D006277 3.7e-95 352.4 347 55.3
Carub.0008s2255 Capsella rubella HOM05D005199 ORTHO05D006277 4.8e-95 352.1 349 54.4
CARHR275620 Cardamine hirsuta HOM05D005199 ORTHO05D006277 6.3e-95 351.7 346 54.6
FAN04G2629 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.4e-94 350.5 350 53.4
RcHm_v2.0_Chr7g0188591 Rosa chinensis HOM05D005199 ORTHO05D006277 2.4e-94 349.7 352 53.4
ATR0582G251 Amborella trichopoda HOM05D005199 ORTHO05D006277 5.4e-94 348.6 337 53.4
FAN13G0330 Fragaria x ananassa HOM05D005199 ORTHO05D006277 7.0e-94 348.2 350 53.1
FAN08G3145 Fragaria x ananassa HOM05D005199 ORTHO05D006277 9.1e-94 347.8 351 53.0
FAN18G4150 Fragaria x ananassa HOM05D005199 ORTHO05D006277 7.7e-93 344.7 349 53.0
Lj9A487G53 Lonicera japonica HOM05D005199 ORTHO05D006277 3.2e-91 339.3 277 63.2
unitig_0.g1099 Utricularia gibba HOM05D005199 ORTHO05D006277 3.6e-90 335.9 301 58.8
COL.COLO4_37264 Corchorus olitorius HOM05D005199 ORTHO05D006277 5.2e-89 332.0 310 56.8
PSO478G1920 Papaver somniferum HOM05D005199 ORTHO05D006277 8.8e-89 331.3 351 51.0
FAN11G0489 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.7e-87 327.0 371 49.9
FAN25G0693 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.7e-87 327.0 360 51.7
Zm00001eb430240 Zea mays HOM05D005199 ORTHO05D006277 2.2e-87 326.6 347 51.3
FvH4_3g04170 Fragaria vesca HOM05D005199 ORTHO05D006277 2.8e-87 326.2 348 52.3
FvH4_3g03530 Fragaria vesca HOM05D005199 ORTHO05D006277 4.9e-87 325.5 371 49.1
FAN11G0779 Fragaria x ananassa HOM05D005199 ORTHO05D006277 4.9e-87 325.5 348 52.0
unitig_61.g26224 Utricularia gibba HOM05D005199 ORTHO05D006277 4.1e-86 322.4 294 60.2
FAN21G1800 Fragaria x ananassa HOM05D005199 ORTHO05D006277 2.7e-85 319.7 368 48.6
Os04g0598300 Oryza sativa ssp. japonica HOM05D005199 ORTHO05D006277 4.3e-83 312.4 345 49.9
Mapoly0113s0034 Marchantia polymorpha HOM05D005199 ORTHO05D006277 3.4e-80 302.8 347 49.6
Pp3c3_11670 Physcomitrium patens HOM05D005199 ORTHO05D006277 2.2e-79 300.1 304 53.3
TPR.G25958 Trifolium pratense HOM05D005199 ORTHO05D006277 2.9e-79 299.7 285 58.6
Migut.D01179 Erythranthe guttata HOM05D005199 ORTHO05D006277 2.4e-78 296.6 162 83.3
SEGI_00497 Sequoiadendron giganteum HOM05D005199 ORTHO05D006277 3.2e-78 296.2 330 49.7
Zm00001eb071990 Zea mays HOM05D005199 ORTHO05D006277 3.9e-76 289.3 324 50.6
Pp3c13_8760 Physcomitrium patens HOM05D005199 ORTHO05D006277 8.6e-76 288.1 287 53.7
Lalb_Chr11g0069151 Lupinus albus HOM05D005199 ORTHO05D006277 4.3e-75 285.8 171 77.8
AUR62043310 Chenopodium quinoa HOM05D005199 ORTHO05D006277 7.3e-75 285.0 307 51.1
AUR62044212 Chenopodium quinoa HOM05D005199 ORTHO05D006277 7.3e-75 285.0 307 51.1
SEGI_03714 Sequoiadendron giganteum HOM05D005199 ORTHO05D006277 2.0e-72 276.9 332 48.5
HPP92_021614 Vanilla planifolia HOM05D005199 ORTHO05D006277 6.0e-69 265.4 278 52.9
Glyma.04G202002 Glycine max HOM05D005199 ORTHO05D006277 1.1e-54 218.0 127 77.2
Lalb_Chr07g0183841 Lupinus albus HOM05D005199 ORTHO05D006277 2.6e-48 196.8 230 52.2
PGSC0003DMG400014174 Solanum tuberosum HOM05D005199 ORTHO05D006277 1.3e-47 194.5 127 74.8
Lalb_Chr12g0202561 Lupinus albus HOM05D005199 ORTHO05D006277 1.1e-46 191.4 228 50.4
Lalb_Chr07g0183831 Lupinus albus HOM05D005199 ORTHO05D006277 1.7e-44 184.1 112 75.9
SMO347G0183 Selaginella moellendorffii HOM05D005199 ORTHO05D006277 1.4e-41 174.5 114 67.5
CBR_g60061 Chara braunii HOM05D005199 ORTHO05D006277 9.0e-41 171.8 299 36.1
FvH4_5g09660 Fragaria vesca HOM05D005199 ORTHO05D006277 9.0e-41 171.8 239 43.5
FAN25G1078 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.6e-37 161.0 165 50.9
Lalb_Chr12g0202551 Lupinus albus HOM05D005199 ORTHO05D006277 5.6e-35 152.5 90 78.9
Sabra15G0071900 Salix brachista HOM05D005199 ORTHO05D006277 5.6e-35 152.5 210 47.6
AagrBONN_evm.TU.Sc2ySwM_228.2166 Anthoceros agrestis HOM05D005199 ORTHO05D006277 2.7e-29 133.7 254 39.4
Actinidia18295 Actinidia chinensis HOM05D005199 ORTHO05D006277 9.6e-27 125.2 72 83.3
Lalb_Chr11g0069141 Lupinus albus HOM05D005199 ORTHO05D006277 1.7e-23 114.4 69 78.3
CANSAT11G1658 Cannabis sativa HOM05D005199 ORTHO05D006277 8.4e-23 112.1 69 75.4
SMO347G0146 Selaginella moellendorffii HOM05D005199 ORTHO05D006277 2.3e-12 77.4 81 44.4
CDE05G0289 Ceratophyllum demersum HOM05D000263 ORTHO05D000213 2.2e-10 70.9 103 40.8


User provided reference genes

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