Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold168G38543 Striga asiatica HOM05D008511 ORTHO05D010691 1.8e-134 482.6 250 100.0
Migut.D01193 Erythranthe guttata HOM05D008511 ORTHO05D010691 1.6e-71 273.5 228 63.6
Oeu010662.1 Olea europaea HOM05D008511 ORTHO05D010691 2.3e-57 226.5 226 52.7
Nitab4.5_0000632g0180 Nicotiana tabacum HOM05D008511 ORTHO05D010691 1.1e-51 207.6 247 49.4
Nitab4.5_0000844g0310 Nicotiana tabacum HOM05D008511 ORTHO05D010691 2.5e-51 206.5 247 49.4
CAN.G809.39 Capsicum annuum HOM05D008511 ORTHO05D010691 1.0e-49 201.1 232 50.9
TAR624G0648 Trochodendron aralioides HOM05D008511 ORTHO05D010691 4.1e-46 189.1 223 46.2
Dinv31195 Davidia involucrata HOM05D008511 ORTHO05D010691 1.7e-44 183.7 215 48.8
RcHm_v2.0_Chr5g0021391 Rosa chinensis HOM05D008511 ORTHO05D010691 9.4e-43 177.9 261 43.3
CANSAT35G2052 Cannabis sativa HOM05D008511 ORTHO05D010691 4.6e-42 175.6 218 45.9
FvH4_3g13150 Fragaria vesca HOM05D008511 ORTHO05D010691 5.1e-41 172.2 236 43.2
CiPaw.10G106900 Carya illinoinensis HOM05D008511 ORTHO05D010691 2.0e-40 170.2 247 44.9
Haze_05233 Corylus avellana HOM05D008511 ORTHO05D010691 1.3e-39 167.5 213 47.4
QL11p011849 Quercus lobata HOM05D008511 ORTHO05D010691 3.7e-39 166.0 232 42.7
FAN21G0240 Fragaria x ananassa HOM05D008511 ORTHO05D010691 1.4e-38 164.1 217 44.2
Prupe.4G119000 Prunus persica HOM05D008511 ORTHO05D010691 1.4e-38 164.1 238 42.4
DCAR_007773 Daucus carota HOM05D008511 ORTHO05D010691 1.5e-37 160.6 227 41.9
Nn7g38379 Nelumbo nucifera HOM05D008511 ORTHO05D010691 2.6e-37 159.8 207 44.9
Aqoxy2G01550 Aquilegia oxysepala HOM05D008511 ORTHO05D010691 1.3e-36 157.5 212 40.6
MD05G1244600 Malus domestica HOM05D008511 ORTHO05D010691 1.7e-36 157.1 243 41.2
FAN16G0518 Fragaria x ananassa HOM05D008511 ORTHO05D010691 2.2e-36 156.8 239 42.3
Atru.chr10.265 Acer truncatum HOM05D008511 ORTHO05D010691 3.2e-35 152.9 228 40.4
Cpa.g.sc30.92 Carica papaya HOM05D008511 ORTHO05D010691 6.1e-34 148.7 201 44.8
Sc24g0002900 Simmondsia chinensis HOM05D008511 ORTHO05D010691 1.0e-33 147.9 215 41.9
CsaV3_1G010050 Cucumis sativus L. HOM05D008511 ORTHO05D010691 8.8e-33 144.8 239 38.1
Sed0008274 Sechium edule HOM05D008511 ORTHO05D010691 2.0e-32 143.7 207 40.6
Gohir.A12G050000 Gossypium hirsutum HOM05D008511 ORTHO05D010691 4.4e-32 142.5 208 42.8
Potri.001G075700 Populus trichocarpa HOM05D008511 ORTHO05D010691 4.1e-30 136.0 234 38.9
Manes.03G071600 Manihot esculenta HOM05D008511 ORTHO05D010691 1.2e-29 134.4 217 38.7
Gorai.008G051400 Gossypium raimondii HOM05D008511 ORTHO05D010691 2.0e-29 133.7 208 40.9
Duzib132G0693 Durio zibethinus HOM05D008511 ORTHO05D010691 2.6e-29 133.3 211 41.2
ClCG03G004120 Citrullus lanatus HOM05D008511 ORTHO05D010691 4.5e-29 132.5 227 38.8
Gohir.D12G048400 Gossypium hirsutum HOM05D008511 ORTHO05D010691 7.7e-29 131.7 208 40.9
Sopen02g026560 Solanum pennellii HOM05D008511 ORTHO05D010691 3.8e-28 129.4 123 51.2
TWI38G1802 Tripterygium wilfordii HOM05D008511 ORTHO05D010691 3.8e-28 129.4 237 37.6
Thecc.02G002800 Theobroma cacao HOM05D008511 ORTHO05D010691 8.5e-28 128.3 233 36.5
MBI02_g25824_MAGBIO Magnolia biondii HOM05D008511 ORTHO05D010691 3.2e-27 126.3 235 35.3
SalBow3G2667 Salvia bowleyana HOM05D008511 ORTHO05D010691 8.0e-26 121.7 109 58.7
arahy.Tifrunner.gnm1.ann1.LWVG2R Arachis hypogaea HOM05D008511 ORTHO05D010691 1.4e-25 120.9 267 33.0
arahy.Tifrunner.gnm1.ann1.5RH3SU Arachis hypogaea HOM05D008511 ORTHO05D010691 1.8e-25 120.6 248 33.9
HPP92_009504 Vanilla planifolia HOM05D008511 ORTHO05D010691 2.3e-25 120.2 232 34.1
Ca_01975_v3 Cicer arietinum L. HOM05D008511 ORTHO05D010691 1.5e-24 117.5 211 36.0
Solyc02g081930.3 Solanum lycopersicum HOM05D008511 ORTHO05D010691 9.7e-24 114.8 118 51.7
Sabra01G0053200 Salix brachista HOM05D008511 ORTHO05D010691 1.2e-16 91.3 125 42.4
Cfa001274 Carpinus fangiana HOM05D008511 ORTHO05D010691 1.7e-15 87.4 120 40.8
COL.COLO4_16225 Corchorus olitorius HOM05D008511 ORTHO05D010691 1.8e-14 84.0 127 37.8
PGSC0003DMG402007333 Solanum tuberosum HOM05D008511 ORTHO05D010691 2.4e-14 83.6 74 55.4
ATR0763G254 Amborella trichopoda HOM05D008511 ORTHO05D010691 3.4e-08 63.2 175 29.1


User provided reference genes

Program Settings