Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold168G38530 Striga asiatica HOM05D007550 ORTHO05D009474 9.0e-72 273.5 138 100.0
Migut.M01677 Erythranthe guttata HOM05D007550 ORTHO05D009474 7.8e-23 110.9 130 53.8
Sc18g0004240 Simmondsia chinensis HOM05D007550 ORTHO05D009474 8.0e-20 100.9 87 58.6
Oeu005969.1 Olea europaea HOM05D007550 ORTHO05D009474 5.2e-19 98.2 92 57.6
ClCG10G004590 Citrullus lanatus HOM05D007550 ORTHO05D009474 4.4e-18 95.1 88 59.1
Nitab4.5_0000163g0330 Nicotiana tabacum HOM05D007550 ORTHO05D009474 4.4e-18 95.1 63 66.7
TWI38G1227 Tripterygium wilfordii HOM05D007550 ORTHO05D009474 1.7e-17 93.2 95 49.5
MSTRG.6984 Avicennia marina HOM05D007550 ORTHO05D009474 2.2e-17 92.8 105 51.4
CiPaw.12G135900 Carya illinoinensis HOM05D007550 ORTHO05D009474 2.9e-17 92.4 72 61.1
CDE06G2160 Ceratophyllum demersum HOM05D007550 ORTHO05D009474 2.9e-17 92.4 66 66.7
Nitab4.5_0001750g0040 Nicotiana tabacum HOM05D007550 ORTHO05D009474 4.9e-17 91.7 64 65.6
GSVIVG01037778001 Vitis vinifera HOM05D007550 ORTHO05D009474 4.9e-17 91.7 68 64.7
Atru.chr2.3607 Acer truncatum HOM05D007550 ORTHO05D009474 6.4e-17 91.3 103 43.7
Manes.15G063300 Manihot esculenta HOM05D007550 ORTHO05D009474 6.4e-17 91.3 76 56.6
Cfa020230 Carpinus fangiana HOM05D007550 ORTHO05D009474 8.3e-17 90.9 115 48.7
Lj1A885G31 Lonicera japonica HOM05D007550 ORTHO05D009474 8.3e-17 90.9 84 56.0
MELO3C014132.2 Cucumis melo HOM05D007550 ORTHO05D009474 2.4e-16 89.4 97 50.5
TAR626G1551 Trochodendron aralioides HOM05D007550 ORTHO05D009474 2.4e-16 89.4 74 59.5
CsaV3_3G004390 Cucumis sativus L. HOM05D007550 ORTHO05D009474 3.2e-16 89.0 102 52.0
Actinidia39070 Actinidia chinensis HOM05D007550 ORTHO05D009474 4.1e-16 88.6 62 66.1
Hma1.2p1_0036F.1_g022730 Hydrangea macrophylla HOM05D007550 ORTHO05D009474 4.1e-16 88.6 74 59.5
unitig_899.g15275 Utricularia gibba HOM05D007550 ORTHO05D009474 5.4e-16 88.2 93 52.7
Cc05_g14670 Coffea canephora HOM05D007550 ORTHO05D009474 7.0e-16 87.8 88 50.0
MD11G1204800 Malus domestica HOM05D007550 ORTHO05D009474 7.0e-16 87.8 65 63.1
Medtr5g094600 Medicago truncatula HOM05D007550 ORTHO05D009474 9.2e-16 87.4 70 58.6
PSO541G5298 Papaver somniferum HOM05D007550 ORTHO05D009474 9.2e-16 87.4 105 43.8
PSO675G9283 Papaver somniferum HOM05D007550 ORTHO05D009474 9.2e-16 87.4 105 43.8
Thhalv10014968m.g Eutrema salsugineum HOM05D007550 ORTHO05D009474 1.6e-15 86.7 72 55.6
Dinv10312 Davidia involucrata HOM05D007550 ORTHO05D009474 2.0e-15 86.3 89 50.6
Glyma.14G015900 Glycine max HOM05D007550 ORTHO05D009474 2.0e-15 86.3 74 58.1
Potri.011G085501 Populus trichocarpa HOM05D007550 ORTHO05D009474 2.0e-15 86.3 75 56.0
Peaxi162Scf00955g00219 Petunia axillaris HOM05D007550 ORTHO05D009474 2.7e-15 85.9 66 60.6
Psat2g008720 Pisum sativum HOM05D007550 ORTHO05D009474 2.7e-15 85.9 75 54.7
BolC9t57498H Brassica oleracea HOM05D007550 ORTHO05D009474 3.5e-15 85.5 54 66.7
C09p46340 Brassica napus HOM05D007550 ORTHO05D009474 4.6e-15 85.1 54 66.7
HanXRQChr13g0408011 Helianthus annuus HOM05D007550 ORTHO05D009474 6.0e-15 84.7 62 64.5
Nn1g07439 Nelumbo nucifera HOM05D007550 ORTHO05D009474 6.0e-15 84.7 68 58.8
Thecc.07G022400 Theobroma cacao HOM05D007550 ORTHO05D009474 6.0e-15 84.7 70 54.3
DCAR_022604 Daucus carota HOM05D007550 ORTHO05D009474 7.8e-15 84.3 55 69.1
QL08p005510 Quercus lobata HOM05D007550 ORTHO05D009474 7.8e-15 84.3 66 57.6
A10p12800 Brassica napus HOM05D007550 ORTHO05D009474 1.0e-14 84.0 54 66.7
BraA10t43373Z Brassica rapa HOM05D007550 ORTHO05D009474 1.0e-14 84.0 54 66.7
Phvul.008G275600 Phaseolus vulgaris HOM05D007550 ORTHO05D009474 1.0e-14 84.0 63 61.9
PGR031G0516 Punica granatum HOM05D007550 ORTHO05D009474 1.0e-14 84.0 64 60.9
ECA240G1453 Erigeron canadensis HOM05D007550 ORTHO05D009474 1.7e-14 83.2 78 55.1
FAN21G0016 Fragaria x ananassa HOM05D007550 ORTHO05D009474 1.7e-14 83.2 78 56.4
Os01g0762300 Oryza sativa ssp. japonica HOM05D007550 ORTHO05D009474 1.7e-14 83.2 80 55.0
Aqoxy4G02213 Aquilegia oxysepala HOM05D007550 ORTHO05D009474 2.3e-14 82.8 59 66.1
FAN25G3253 Fragaria x ananassa HOM05D007550 ORTHO05D009474 2.3e-14 82.8 100 49.0
VMungo0647G1572 Vigna mungo HOM05D007550 ORTHO05D009474 2.3e-14 82.8 69 56.5
CAN.G410.43 Capsicum annuum HOM05D007550 ORTHO05D009474 3.0e-14 82.4 63 61.9
CARHR268880 Cardamine hirsuta HOM05D007550 ORTHO05D009474 3.0e-14 82.4 72 55.6
Duzib213G0332 Durio zibethinus HOM05D007550 ORTHO05D009474 3.0e-14 82.4 83 51.8
FvH4_3g24050 Fragaria vesca HOM05D007550 ORTHO05D009474 3.0e-14 82.4 78 57.7
Ciclev10009869m.g Citrus clementina HOM05D007550 ORTHO05D009474 3.9e-14 82.0 64 57.8
FAN16G0277 Fragaria x ananassa HOM05D007550 ORTHO05D009474 3.9e-14 82.0 64 62.5
THA.LOC104817699 Tarenaya hassleriana HOM05D007550 ORTHO05D009474 3.9e-14 82.0 69 56.5
Sed0001315 Sechium edule HOM05D007550 ORTHO05D009474 5.0e-14 81.6 102 46.1
Solyc12g015630.2 Solanum lycopersicum HOM05D007550 ORTHO05D009474 5.0e-14 81.6 59 62.7
PGSC0003DMG400029800 Solanum tuberosum HOM05D007550 ORTHO05D009474 5.0e-14 81.6 59 62.7
Zm00001eb370450 Zea mays HOM05D007550 ORTHO05D009474 5.0e-14 81.6 71 57.7
Gohir.A01G087300 Gossypium hirsutum HOM05D007550 ORTHO05D009474 6.6e-14 81.3 82 50.0
Gorai.002G096500 Gossypium raimondii HOM05D007550 ORTHO05D009474 6.6e-14 81.3 82 50.0
RcHm_v2.0_Chr5g0042631 Rosa chinensis HOM05D007550 ORTHO05D009474 6.6e-14 81.3 64 64.1
FAN25G1734 Fragaria x ananassa HOM05D007550 ORTHO05D009474 8.6e-14 80.9 78 53.8
LjContig00272g0022958 Lotus japonicus HOM05D007550 ORTHO05D009474 8.6e-14 80.9 62 58.1
AL8G31140 Arabidopsis lyrata HOM05D007550 ORTHO05D009474 1.1e-13 80.5 74 50.0
CANSAT56G0742 Cannabis sativa HOM05D007550 ORTHO05D009474 1.1e-13 80.5 75 53.3
FAN11G2859 Fragaria x ananassa HOM05D007550 ORTHO05D009474 1.1e-13 80.5 64 64.1
Gohir.D01G073600 Gossypium hirsutum HOM05D007550 ORTHO05D009474 1.9e-13 79.7 82 50.0
Sabra02G0058600 Salix brachista HOM05D007550 ORTHO05D009474 1.9e-13 79.7 71 57.7
AT5G55570 Arabidopsis thaliana HOM05D007550 ORTHO05D009474 3.3e-13 79.0 54 63.0
Lalb_Chr17g0348791 Lupinus albus HOM05D007550 ORTHO05D009474 5.6e-13 78.2 65 55.4
Mapoly0128s0022 Marchantia polymorpha HOM05D007550 ORTHO05D009474 5.6e-13 78.2 78 51.3
Pp3c18_5680 Physcomitrium patens HOM05D007550 ORTHO05D009474 5.6e-13 78.2 77 53.2
Carub.0008s1594 Capsella rubella HOM05D007550 ORTHO05D009474 7.3e-13 77.8 74 48.6
ATR1149G080 Amborella trichopoda HOM05D007550 ORTHO05D009474 9.5e-13 77.4 46 78.3
Hma1.2p1_0036F.1_g022720 Hydrangea macrophylla HOM05D007550 ORTHO05D009474 1.6e-12 76.6 91 49.5
AagrBONN_evm.TU.Sc2ySwM_344.2781 Anthoceros agrestis HOM05D007550 ORTHO05D009474 2.8e-12 75.9 57 57.9
Sopen12g007530 Solanum pennellii HOM05D007550 ORTHO05D009474 3.6e-12 75.5 59 61.0
COL.COLO4_09786 Corchorus olitorius HOM05D007550 ORTHO05D009474 4.7e-12 75.1 92 45.7
Aa31LG3G11520 Aethionema arabicum HOM05D007550 ORTHO05D009474 2.3e-11 72.8 76 47.4
HPP92_028367 Vanilla planifolia HOM05D007550 ORTHO05D009474 6.8e-11 71.2 65 49.2
MBI16_g11565_MAGBIO Magnolia biondii HOM05D007550 ORTHO05D009474 5.8e-10 68.2 93 46.2
CBR_g30607 Chara braunii HOM05D007550 ORTHO05D009474 7.5e-10 67.8 67 46.3
vmacro09669 Vaccinium macrocarpon HOM05D007550 ORTHO05D009474 8.3e-09 64.3 48 64.6
arahy.Tifrunner.gnm1.ann1.S0MYI4 Arachis hypogaea HOM05D007550 ORTHO05D009474 2.4e-08 62.8 122 37.7
Prupe.4G233900 Prunus persica HOM05D007550 ORTHO05D009474 4.1e-08 62.0 105 39.0
Ah.06g181190 Amaranthus hybridus HOM05D000063 ORTHO05D000906 7.1e-08 61.2 59 52.5
BcaB08g35917 Brassica carinata HOM05D007550 ORTHO05D009474 7.1e-08 61.2 54 53.7
arahy.Tifrunner.gnm1.ann1.R7ZLS4 Arachis hypogaea HOM05D007550 ORTHO05D009474 9.2e-08 60.8 66 43.9
Potri.011G085700 Populus trichocarpa HOM05D007550 ORTHO05D009474 3.9e-06 55.5 53 52.8
Hund01919 Selenicereus undatus HOM05D007550 ORTHO05D009474 5.1e-06 55.1 57 52.6


User provided reference genes

Program Settings