Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold168G38522 Striga asiatica HOM05D005997 ORTHO05D008323 5.8e-169 597.4 294 100.0
Migut.M01687 Erythranthe guttata HOM05D005997 ORTHO05D008323 5.2e-117 424.9 289 74.4
SalBow8G0955 Salvia bowleyana HOM05D005997 ORTHO05D008323 5.7e-116 421.4 295 71.9
MSTRG.6975 Avicennia marina HOM05D005997 ORTHO05D008323 7.2e-111 404.4 294 70.7
Potri.008G180300 Populus trichocarpa HOM05D005997 ORTHO05D008323 1.6e-110 403.3 276 69.2
Nitab4.5_0010102g0010 Nicotiana tabacum HOM05D005997 ORTHO05D008323 8.0e-110 401.0 239 78.7
Nitab4.5_0001160g0200 Nicotiana tabacum HOM05D005997 ORTHO05D008323 6.8e-109 397.9 239 78.2
Sabra08G0137600 Salix brachista HOM05D005997 ORTHO05D008323 1.2e-108 397.1 254 71.3
Sopen07g033400 Solanum pennellii HOM05D005997 ORTHO05D008323 1.5e-108 396.7 241 78.0
Solyc07g065180.3 Solanum lycopersicum HOM05D005997 ORTHO05D008323 3.4e-108 395.6 241 78.0
COL.COLO4_09766 Corchorus olitorius HOM05D005997 ORTHO05D008323 2.8e-107 392.5 240 76.2
Eucgr.F03518 Eucalyptus grandis HOM05D005997 ORTHO05D008323 4.9e-107 391.7 237 76.8
PGSC0003DMG400022292 Solanum tuberosum HOM05D005997 ORTHO05D008323 4.9e-107 391.7 241 77.2
TAR624G0829 Trochodendron aralioides HOM05D005997 ORTHO05D008323 8.3e-107 391.0 238 76.9
Manes.03G134100 Manihot esculenta HOM05D005997 ORTHO05D008323 1.1e-106 390.6 263 69.6
Actinidia00103 Actinidia chinensis HOM05D005997 ORTHO05D008323 5.4e-106 388.3 251 73.3
Cc05_g14560 Coffea canephora HOM05D005997 ORTHO05D008323 9.2e-106 387.5 241 74.3
Gohir.D01G072400 Gossypium hirsutum HOM05D005997 ORTHO05D008323 1.2e-105 387.1 233 76.0
Ciclev10009024m.g Citrus clementina HOM05D005997 ORTHO05D008323 2.7e-105 386.0 269 66.5
Gorai.002G095400 Gossypium raimondii HOM05D005997 ORTHO05D008323 3.5e-105 385.6 233 75.5
Phvul.006G051400 Phaseolus vulgaris HOM05D005997 ORTHO05D008323 4.5e-105 385.2 245 73.9
TWI38G0893 Tripterygium wilfordii HOM05D005997 ORTHO05D008323 5.9e-105 384.8 259 71.8
CAN.G337.36 Capsicum annuum HOM05D005997 ORTHO05D008323 7.7e-105 384.4 241 75.1
FAN21G1688 Fragaria x ananassa HOM05D005997 ORTHO05D008323 1.7e-104 383.3 289 65.1
Glyma.08G325100 Glycine max HOM05D005997 ORTHO05D008323 1.7e-104 383.3 255 72.5
Gohir.A01G086200 Gossypium hirsutum HOM05D005997 ORTHO05D008323 1.1e-103 380.6 233 74.7
RcHm_v2.0_Chr5g0042111 Rosa chinensis HOM05D005997 ORTHO05D008323 1.1e-103 380.6 227 75.8
VMungo0540G2314 Vigna mungo HOM05D005997 ORTHO05D008323 1.1e-103 380.6 252 71.8
Nn1g03269 Nelumbo nucifera HOM05D005997 ORTHO05D008323 1.5e-103 380.2 289 64.7
Oeu019619.1 Olea europaea HOM05D005997 ORTHO05D008323 1.5e-103 380.2 320 61.9
RcHm_v2.0_Chr5g0042181 Rosa chinensis HOM05D005997 ORTHO05D008323 1.5e-103 380.2 227 75.8
Dinv40826 Davidia involucrata HOM05D005997 ORTHO05D008323 4.3e-103 378.6 247 72.9
Hma1.2p1_0036F.1_g022850 Hydrangea macrophylla HOM05D005997 ORTHO05D008323 5.6e-103 378.3 231 74.9
Thecc.07G024000 Theobroma cacao HOM05D005997 ORTHO05D008323 7.3e-103 377.9 233 74.2
Sc07g0002940 Simmondsia chinensis HOM05D005997 ORTHO05D008323 9.5e-103 377.5 229 74.7
Lj6g0009736 Lotus japonicus HOM05D005997 ORTHO05D008323 1.2e-102 377.1 252 71.0
Duzib213G0008 Durio zibethinus HOM05D005997 ORTHO05D008323 2.8e-102 375.9 233 73.8
CANSAT11G0206 Cannabis sativa HOM05D005997 ORTHO05D008323 2.3e-101 372.9 289 64.0
arahy.Tifrunner.gnm1.ann1.N1CS9Q Arachis hypogaea HOM05D005997 ORTHO05D008323 4.0e-101 372.1 298 62.4
GSVIVG01037764001 Vitis vinifera HOM05D005997 ORTHO05D008323 4.0e-101 372.1 277 64.6
arahy.Tifrunner.gnm1.ann1.JACZ02 Arachis hypogaea HOM05D005997 ORTHO05D008323 5.2e-101 371.7 260 67.3
PSO210G1255 Papaver somniferum HOM05D005997 ORTHO05D008323 6.8e-101 371.3 239 72.4
Rhsim06G0225700 Rhododendron simsii HOM05D005997 ORTHO05D008323 6.8e-101 371.3 265 69.8
Prupe.4G230500 Prunus persica HOM05D005997 ORTHO05D008323 8.9e-101 370.9 237 73.4
TPR.G1907 Trifolium pratense HOM05D005997 ORTHO05D008323 2.6e-100 369.4 229 75.5
DCAR_022603 Daucus carota HOM05D005997 ORTHO05D008323 7.5e-100 367.9 243 71.2
FAN25G0611 Fragaria x ananassa HOM05D005997 ORTHO05D008323 7.5e-100 367.9 252 69.4
FvH4_3g23860 Fragaria vesca HOM05D005997 ORTHO05D008323 6.4e-99 364.8 216 76.9
Psat5g172000 Pisum sativum HOM05D005997 ORTHO05D008323 6.4e-99 364.8 253 69.2
Medtr3g055920 Medicago truncatula HOM05D005997 ORTHO05D008323 3.2e-98 362.5 226 75.7
Carub.0001s3961 Capsella rubella HOM05D005997 ORTHO05D008323 1.2e-97 360.5 240 71.7
Ca_20145_v3 Cicer arietinum L. HOM05D005997 ORTHO05D008323 1.2e-97 360.5 248 70.2
CiPaw.12G135200 Carya illinoinensis HOM05D005997 ORTHO05D008323 1.6e-97 360.1 213 77.5
Ca_20142_v3 Cicer arietinum L. HOM05D005997 ORTHO05D008323 1.0e-96 357.5 220 75.5
Thhalv10011693m.g Eutrema salsugineum HOM05D005997 ORTHO05D008323 5.0e-96 355.1 242 69.8
MD11G1206400 Malus domestica HOM05D005997 ORTHO05D008323 5.0e-96 355.1 227 73.1
THA.LOC104826490 Tarenaya hassleriana HOM05D005997 ORTHO05D008323 5.0e-96 355.1 237 69.6
CsaV3_7G018710 Cucumis sativus L. HOM05D005997 ORTHO05D008323 6.6e-96 354.8 233 68.7
ECA236G3940 Erigeron canadensis HOM05D004336 ORTHO05D005367 6.6e-96 354.8 219 75.3
AL1G58220 Arabidopsis lyrata HOM05D005997 ORTHO05D008323 8.6e-96 354.4 239 70.7
Lalb_Chr06g0174051 Lupinus albus HOM05D005997 ORTHO05D008323 1.1e-95 354.0 242 68.2
Aa31LG10G3760 Aethionema arabicum HOM05D005997 ORTHO05D008323 5.6e-95 351.7 229 71.6
Aqoxy1G04030 Aquilegia oxysepala HOM05D005997 ORTHO05D008323 5.6e-95 351.7 221 74.2
CARHR040570 Cardamine hirsuta HOM05D005997 ORTHO05D008323 5.6e-95 351.7 240 70.4
Os03g0587100 Oryza sativa ssp. japonica HOM05D005997 ORTHO05D008323 7.3e-95 351.3 216 72.2
Sed0012266 Sechium edule HOM05D005997 ORTHO05D008323 7.3e-95 351.3 236 68.2
A06p03040 Brassica napus HOM05D005997 ORTHO05D008323 9.5e-95 350.9 239 70.3
Lj1C884G3 Lonicera japonica HOM05D005997 ORTHO05D008323 1.2e-94 350.5 287 62.0
AT1G50575 Arabidopsis thaliana HOM05D005997 ORTHO05D008323 1.6e-94 350.1 236 70.3
Sp1g37390 Schrenkiella parvula HOM05D005997 ORTHO05D008323 1.6e-94 350.1 242 69.0
BraA06t23516Z Brassica rapa HOM05D005997 ORTHO05D008323 2.8e-94 349.4 239 69.9
BcaC08g43226 Brassica carinata HOM05D005997 ORTHO05D008323 1.4e-93 347.1 239 69.9
C06p05740 Brassica napus HOM05D005997 ORTHO05D008323 1.4e-93 347.1 239 69.9
BolC6t35684H Brassica oleracea HOM05D005997 ORTHO05D008323 1.4e-93 347.1 239 69.9
MBI16_g42314_MAGBIO Magnolia biondii HOM05D005997 ORTHO05D008323 3.1e-93 345.9 248 66.9
BcaB07g33491 Brassica carinata HOM05D005997 ORTHO05D008323 4.0e-93 345.5 239 68.6
ClCG09G021010 Citrullus lanatus HOM05D005997 ORTHO05D008323 4.0e-93 345.5 231 69.3
Lsat_1_v5_gn_7_114661 Lactuca sativa HOM05D005997 ORTHO05D008323 8.9e-93 344.4 291 62.2
Zm00001eb049320 Zea mays HOM05D005997 ORTHO05D008323 8.9e-93 344.4 223 68.6
PGR044G2356 Punica granatum HOM05D005997 ORTHO05D008323 2.0e-92 343.2 213 73.7
unitig_899.g15278 Utricularia gibba HOM05D005997 ORTHO05D008323 1.9e-90 336.7 192 80.2
ATR0712G169 Amborella trichopoda HOM05D005997 ORTHO05D008323 4.1e-90 335.5 219 68.5
SEGI_04256 Sequoiadendron giganteum HOM05D005997 ORTHO05D008323 4.6e-89 332.0 223 67.7
EL10Ac4g07628 Beta vulgaris HOM05D005997 ORTHO05D008323 6.0e-89 331.6 256 61.7
Peaxi162Scf00047g00845 Petunia axillaris HOM05D005997 ORTHO05D008323 3.1e-85 319.3 245 65.7
AagrBONN_evm.TU.Sc2ySwM_362.871 Anthoceros agrestis HOM05D005997 ORTHO05D008323 2.0e-84 316.6 235 62.6
SMO196G0283 Selaginella moellendorffii HOM05D005997 ORTHO05D008323 2.0e-84 316.6 217 65.0
Haze_09774 Corylus avellana HOM05D005997 ORTHO05D008323 1.1e-82 310.8 229 69.0
vmacro11568 Vaccinium macrocarpon HOM05D005997 ORTHO05D008323 2.4e-82 309.7 241 64.3
MELO3C024895.2 Cucumis melo HOM05D005997 ORTHO05D008323 1.5e-79 300.4 199 70.4
PGR031G3624 Punica granatum HOM05D005997 ORTHO05D008323 2.5e-79 299.7 186 73.1
Atru.BG.132.p Acer truncatum HOM05D005997 ORTHO05D008323 2.1e-78 296.6 170 80.0
Cpa.g.sc12.206 Carica papaya HOM05D005997 ORTHO05D008323 4.7e-78 295.4 244 60.7
QL08p008622 Quercus lobata HOM05D005997 ORTHO05D008323 6.2e-78 295.0 172 79.1
Pp3c14_23810 Physcomitrium patens HOM05D005997 ORTHO05D008323 1.2e-76 290.8 219 60.3
Psat5g171680 Pisum sativum HOM05D005997 ORTHO05D008323 4.4e-76 288.9 178 74.7
CDE07G1873 Ceratophyllum demersum HOM05D005997 ORTHO05D008323 5.8e-76 288.5 236 60.6
PSO302G0218 Papaver somniferum HOM05D005997 ORTHO05D008323 4.9e-75 285.4 291 54.3
AUR62040674 Chenopodium quinoa HOM05D005997 ORTHO05D008323 3.5e-73 279.3 176 72.7
AUR62015935 Chenopodium quinoa HOM05D005997 ORTHO05D008323 6.0e-73 278.5 173 73.4
Glyma.18G084600 Glycine max HOM05D005997 ORTHO05D008323 5.1e-64 248.8 209 60.3
Dinv10299 Davidia involucrata HOM05D005997 ORTHO05D008323 1.1e-55 221.1 169 63.3
MCO11G065 Micromonas commoda HOM05D004293 ORTHO05D005044 7.6e-52 208.4 219 45.2
MCO09G728 Micromonas commoda HOM05D004293 ORTHO05D005044 4.9e-51 205.7 219 44.3
arahy.Tifrunner.gnm1.ann1.D6FGWZ Arachis hypogaea HOM05D005997 ORTHO05D008323 2.4e-50 203.4 177 59.3
Cre01.g039850 Chlamydomonas reinhardtii HOM05D005997 ORTHO05D005044 4.6e-49 199.1 223 44.8
PRCOL_00002636 Prasinoderma coloniale HOM05D005997 ORTHO05D008323 7.9e-49 198.4 225 48.4
HPP92_007350 Vanilla planifolia HOM05D005997 ORTHO05D008323 2.3e-48 196.8 147 61.9
CSS0025804 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 2.8e-46 189.9 181 56.4
PRCOL_00000116 Prasinoderma coloniale HOM05D005997 ORTHO05D008323 1.1e-45 188.0 212 45.3
CSS0016170 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 3.4e-44 183.0 112 74.1
CSS0047434 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 1.0e-43 181.4 112 73.2
Cfa020073 Carpinus fangiana HOM05D005997 ORTHO05D008323 6.7e-40 168.7 101 77.2
Atru.chr7.2230 Acer truncatum HOM05D005997 ORTHO05D008323 3.4e-36 156.4 97 73.2
Atru.chr7.2351 Acer truncatum HOM05D005997 ORTHO05D008323 3.4e-36 156.4 97 73.2
Aqoxy1G04027 Aquilegia oxysepala HOM05D005997 ORTHO05D008323 2.1e-33 147.1 106 62.3
QL08p004262 Quercus lobata HOM05D005997 ORTHO05D008323 2.0e-28 130.6 147 51.0
QL08p058329 Quercus lobata HOM05D005997 ORTHO05D008323 2.0e-28 130.6 147 51.0
Prupe.4G230300 Prunus persica HOM05D005997 ORTHO05D008323 5.0e-27 125.9 106 59.4
CSS0048391 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 4.6e-25 119.4 79 68.4
QL05p025044 Quercus lobata HOM05D005997 ORTHO05D008323 2.6e-23 113.6 168 42.3
SEGI_34153 Sequoiadendron giganteum HOM05D005997 ORTHO05D008323 1.7e-22 110.9 77 66.2
CSS0044071 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 6.5e-19 99.0 56 80.4
CSS0025137 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 2.3e-16 90.5 50 82.0
QL08p004281 Quercus lobata HOM05D005997 ORTHO05D007626 3.9e-16 89.7 123 46.3
QL11p054366 Quercus lobata HOM05D005997 ORTHO05D338109 2.2e-14 84.0 117 47.0
QL08p004325 Quercus lobata HOM05D005997 ORTHO05D337094 6.3e-14 82.4 112 48.2
Rhsim03G0100400 Rhododendron simsii HOM05D005997 ORTHO05D338268 5.3e-13 79.3 89 49.4
QL08p058354 Quercus lobata HOM05D005997 ORTHO05D007626 7.0e-13 79.0 113 41.6
Lsat_1_v5_gn_8_39280 Lactuca sativa HOM05D005997 ORTHO05D230963 7.2e-10 68.9 48 64.6
arahy.Tifrunner.gnm1.ann1.U3B0HF Arachis hypogaea HOM05D003842 ORTHO05D026908 1.0e-08 65.1 67 55.2
AUR62035741 Chenopodium quinoa HOM05D000450 ORTHO05D000327 1.7e-06 57.8 196 26.0
arahy.Tifrunner.gnm1.ann1.EBVM73 Arachis hypogaea HOM05D005997 ORTHO05D004267 2.2e-06 57.4 38 71.1
QL08p004656 Quercus lobata HOM05D005997 ORTHO05D337365 6.3e-06 55.8 36 72.2


User provided reference genes

Program Settings