Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold167G38443 Striga asiatica HOM05D006848 ORTHO05D008445 1.2e-111 406.8 238 100.0
Migut.B01319 Erythranthe guttata HOM05D006848 ORTHO05D008445 2.1e-84 316.2 245 72.7
SalBow5G3403 Salvia bowleyana HOM05D006848 ORTHO05D008445 1.4e-80 303.5 239 70.3
Ciclev10032624m.g Citrus clementina HOM05D006848 ORTHO05D008445 3.8e-78 295.4 239 64.9
PGR031G3843 Punica granatum HOM05D006848 ORTHO05D008445 1.5e-77 293.5 247 66.0
Glyma.15G273300 Glycine max HOM05D006848 ORTHO05D008445 1.9e-77 293.1 233 65.7
CANSAT80G2127 Cannabis sativa HOM05D006848 ORTHO05D008445 3.2e-77 292.4 242 62.8
Haze_03213 Corylus avellana HOM05D006848 ORTHO05D008445 5.5e-77 291.6 245 67.8
Hma1.2p1_0312F.1_g121500 Hydrangea macrophylla HOM05D006848 ORTHO05D008445 2.7e-76 289.3 243 68.7
Sabra09G0046200 Salix brachista HOM05D006848 ORTHO05D008445 2.7e-76 289.3 243 63.4
Atru.chr11.2648 Acer truncatum HOM05D006848 ORTHO05D008445 3.6e-76 288.9 241 70.1
Oeu036185.1 Olea europaea HOM05D006848 ORTHO05D008445 4.7e-76 288.5 243 68.7
FvH4_7g00900 Fragaria vesca HOM05D006848 ORTHO05D008445 1.0e-75 287.3 242 64.5
Peaxi162Scf00347g00071 Petunia axillaris HOM05D006848 ORTHO05D008445 1.8e-75 286.6 238 68.1
unitig_750.g28451 Utricularia gibba HOM05D006848 ORTHO05D008445 1.8e-75 286.6 171 80.1
Lalb_Chr01g0015361 Lupinus albus HOM05D006848 ORTHO05D008445 2.3e-75 286.2 241 63.9
Rhsim07G0054800 Rhododendron simsii HOM05D006848 ORTHO05D008445 5.2e-75 285.0 247 66.4
Phvul.005G020200 Phaseolus vulgaris HOM05D006848 ORTHO05D008445 6.8e-75 284.6 238 68.5
COL.COLO4_23924 Corchorus olitorius HOM05D006848 ORTHO05D008445 1.5e-74 283.5 239 62.3
Eucgr.G03390 Eucalyptus grandis HOM05D006848 ORTHO05D008445 5.7e-74 281.6 247 60.7
arahy.Tifrunner.gnm1.ann1.27LE56 Arachis hypogaea HOM05D006848 ORTHO05D008445 7.5e-74 281.2 234 70.5
Glyma.08G154300 Glycine max HOM05D006848 ORTHO05D008445 7.5e-74 281.2 237 64.1
TWI53G1868 Tripterygium wilfordii HOM05D006848 ORTHO05D008445 7.5e-74 281.2 240 62.1
VMungo1080G1360 Vigna mungo HOM05D006848 ORTHO05D008445 9.8e-74 280.8 214 66.4
arahy.Tifrunner.gnm1.ann1.9ZN1DC Arachis hypogaea HOM05D006848 ORTHO05D008445 1.3e-73 280.4 171 81.3
ECA248G3622 Erigeron canadensis HOM05D006848 ORTHO05D008445 1.3e-73 280.4 245 66.9
FAN10G1997 Fragaria x ananassa HOM05D006848 ORTHO05D008445 2.2e-73 279.6 248 62.9
MD07G1008600 Malus domestica HOM05D006848 ORTHO05D008445 2.8e-73 279.3 173 74.6
Ca_14368_v3 Cicer arietinum L. HOM05D006848 ORTHO05D008445 4.8e-73 278.5 212 66.5
vmacro13656 Vaccinium macrocarpon HOM05D006848 ORTHO05D008445 6.3e-73 278.1 239 64.0
Aqoxy3G03705 Aquilegia oxysepala HOM05D006848 ORTHO05D008445 1.4e-72 276.9 199 66.3
Potri.009G062500 Populus trichocarpa HOM05D006848 ORTHO05D008445 3.1e-72 275.8 243 60.5
Gohir.D08G063100 Gossypium hirsutum HOM05D006848 ORTHO05D008445 4.1e-72 275.4 237 62.9
Gorai.004G065300 Gossypium raimondii HOM05D006848 ORTHO05D008445 4.1e-72 275.4 237 62.9
Prupe.2G012000 Prunus persica HOM05D006848 ORTHO05D008445 4.1e-72 275.4 173 78.6
Thecc.01G412000 Theobroma cacao HOM05D006848 ORTHO05D008445 4.1e-72 275.4 247 60.3
CiPaw.13G004400 Carya illinoinensis HOM05D006848 ORTHO05D008445 7.0e-72 274.6 173 74.6
Nn113s43373 Nelumbo nucifera HOM05D006848 ORTHO05D008445 7.0e-72 274.6 254 66.5
Nn2g15435 Nelumbo nucifera HOM05D006848 ORTHO05D008445 7.0e-72 274.6 254 66.5
Lj7A569T67 Lonicera japonica HOM05D006848 ORTHO05D008445 1.2e-71 273.9 171 74.3
Nitab4.5_0000634g0080 Nicotiana tabacum HOM05D006848 ORTHO05D008445 2.0e-71 273.1 214 67.8
DCAR_029663 Daucus carota HOM05D006848 ORTHO05D008445 2.7e-71 272.7 238 63.4
TAR623G0094 Trochodendron aralioides HOM05D006848 ORTHO05D008445 2.7e-71 272.7 240 62.9
CAN.G170.111 Capsicum annuum HOM05D006848 ORTHO05D008445 3.5e-71 272.3 215 66.0
Nitab4.5_0002477g0050 Nicotiana tabacum HOM05D006848 ORTHO05D008445 3.5e-71 272.3 245 64.1
Sc10g0000020 Simmondsia chinensis HOM05D006848 ORTHO05D008445 3.5e-71 272.3 171 75.4
Gohir.A08G053600 Gossypium hirsutum HOM05D006848 ORTHO05D008445 4.5e-71 271.9 237 64.1
TAR623G0130 Trochodendron aralioides HOM05D006848 ORTHO05D008445 4.5e-71 271.9 169 75.1
HanXRQChr01g0016151 Helianthus annuus HOM05D006848 ORTHO05D008445 5.9e-71 271.6 245 61.2
Psat5g204320 Pisum sativum HOM05D006848 ORTHO05D008445 5.9e-71 271.6 171 73.1
Eucgr.H02489 Eucalyptus grandis HOM05D006848 ORTHO05D008445 7.7e-71 271.2 170 74.7
MD02G1313800 Malus domestica HOM05D006848 ORTHO05D008445 7.7e-71 271.2 246 61.0
Peaxi162Scf00428g00063 Petunia axillaris HOM05D006848 ORTHO05D008445 7.7e-71 271.2 174 73.6
PGSC0003DMG400006872 Solanum tuberosum HOM05D006848 ORTHO05D008445 7.7e-71 271.2 246 61.4
ClCG09G004240 Citrullus lanatus HOM05D006848 ORTHO05D008445 1.0e-70 270.8 241 58.1
QL04p007215 Quercus lobata HOM05D006848 ORTHO05D008445 1.0e-70 270.8 242 62.8
Sed0006624 Sechium edule HOM05D006848 ORTHO05D008445 1.0e-70 270.8 243 58.8
Solyc01g087040.2 Solanum lycopersicum HOM05D006848 ORTHO05D008445 1.0e-70 270.8 246 65.9
TWI09G1547 Tripterygium wilfordii HOM05D006848 ORTHO05D008445 1.3e-70 270.4 238 62.2
Cpa.g.sc386.5 Carica papaya HOM05D006848 ORTHO05D008445 1.7e-70 270.0 242 61.2
Carub.0005s3015 Capsella rubella HOM05D006848 ORTHO05D008445 2.3e-70 269.6 237 61.6
MBI01_g27616_MAGBIO Magnolia biondii HOM05D006848 ORTHO05D008445 2.3e-70 269.6 238 63.4
Duzib138G1675 Durio zibethinus HOM05D006848 ORTHO05D008445 2.9e-70 269.2 237 58.6
TPR.G12217 Trifolium pratense HOM05D006848 ORTHO05D008445 5.0e-70 268.5 202 63.9
Cc02_g27800 Coffea canephora HOM05D006848 ORTHO05D008445 8.6e-70 267.7 171 74.9
THA.LOC104819691 Tarenaya hassleriana HOM05D006848 ORTHO05D008445 8.6e-70 267.7 193 65.8
CsaV3_7G031150 Cucumis sativus L. HOM05D006848 ORTHO05D008445 1.1e-69 267.3 248 57.7
Sopen01g034120 Solanum pennellii HOM05D006848 ORTHO05D008445 1.1e-69 267.3 246 65.9
AL5G46400 Arabidopsis lyrata HOM05D006848 ORTHO05D008445 1.5e-69 266.9 237 61.2
Medtr3g028150 Medicago truncatula HOM05D006848 ORTHO05D008445 1.5e-69 266.9 169 71.0
CARHR291430 Cardamine hirsuta HOM05D006848 ORTHO05D008445 2.5e-69 266.2 237 61.6
MELO3C023542.2 Cucumis melo HOM05D006848 ORTHO05D008445 2.5e-69 266.2 171 72.5
Lsat_1_v5_gn_1_107841 Lactuca sativa HOM05D006848 ORTHO05D008445 3.3e-69 265.8 244 64.8
PSO384G0049 Papaver somniferum HOM05D006848 ORTHO05D008445 7.2e-69 264.6 250 56.4
A03p27190 Brassica napus HOM05D006848 ORTHO05D008445 9.5e-69 264.2 238 61.3
BraA03t11932Z Brassica rapa HOM05D006848 ORTHO05D008445 9.5e-69 264.2 238 61.3
BcaB01g02988 Brassica carinata HOM05D006848 ORTHO05D008445 1.2e-68 263.8 237 62.4
BcaC01g04883 Brassica carinata HOM05D006848 ORTHO05D008445 2.1e-68 263.1 238 60.9
PSO135G0340 Papaver somniferum HOM05D006848 ORTHO05D008445 2.1e-68 263.1 248 56.0
BolC3t15604H Brassica oleracea HOM05D006848 ORTHO05D008445 6.1e-68 261.5 238 60.1
EL10Ac2g03652 Beta vulgaris HOM05D006848 ORTHO05D008445 1.8e-67 260.0 244 57.0
Sp1g00010 Schrenkiella parvula HOM05D006848 ORTHO05D008445 4.0e-67 258.8 241 68.5
Sp5g00040 Schrenkiella parvula HOM05D006848 ORTHO05D008445 4.0e-67 258.8 241 68.5
CDE05G1882 Ceratophyllum demersum HOM05D006848 ORTHO05D008445 6.8e-67 258.1 213 62.0
AUR62023058 Chenopodium quinoa HOM05D006848 ORTHO05D008445 8.9e-67 257.7 243 65.8
FAN01G1688 Fragaria x ananassa HOM05D006848 ORTHO05D008445 3.4e-66 255.8 242 60.3
RcHm_v2.0_Chr3g0473601 Rosa chinensis HOM05D006848 ORTHO05D008445 1.3e-65 253.8 224 60.3
Aa31LG10G17430 Aethionema arabicum HOM05D006848 ORTHO05D008445 2.2e-65 253.1 150 77.3
AUR62009377 Chenopodium quinoa HOM05D006848 ORTHO05D008445 4.9e-65 251.9 244 62.7
FAN06G1876 Fragaria x ananassa HOM05D006848 ORTHO05D008445 2.9e-62 242.7 236 59.7
SEGI_25651 Sequoiadendron giganteum HOM05D006848 ORTHO05D008445 5.0e-62 241.9 204 59.3
AagrBONN_evm.TU.Sc2ySwM_228.3199 Anthoceros agrestis HOM05D006848 ORTHO05D008445 8.6e-62 241.1 169 63.9
ATR0605G006 Amborella trichopoda HOM05D006848 ORTHO05D008445 9.5e-61 237.7 171 65.5
Os08g0504500 Oryza sativa ssp. japonica HOM05D006848 ORTHO05D008445 6.1e-60 235.0 169 72.8
SMO217G0004 Selaginella moellendorffii HOM05D006848 ORTHO05D008445 4.0e-59 232.3 170 62.4
SMO356G0122 Selaginella moellendorffii HOM05D006848 ORTHO05D008445 4.0e-59 232.3 170 62.4
Zm00001eb034740 Zea mays HOM05D006848 ORTHO05D008445 4.0e-59 232.3 169 65.7
C03p32680 Brassica napus HOM05D006848 ORTHO05D008445 2.0e-58 229.9 219 59.4
Lj1g0010524 Lotus japonicus HOM05D006848 ORTHO05D008445 2.6e-58 229.6 173 65.9
HPP92_007477 Vanilla planifolia HOM05D006848 ORTHO05D008445 4.4e-58 228.8 236 53.4
AT3G63540 Arabidopsis thaliana HOM05D006848 ORTHO05D008445 3.7e-57 225.7 138 76.1
Thhalv10006361m.g Eutrema salsugineum HOM05D006848 ORTHO05D008445 5.4e-56 221.9 240 51.7
Pp3c4_11800 Physcomitrium patens HOM05D006848 ORTHO05D008445 2.0e-55 219.9 170 58.8
Mapoly0075s0034 Marchantia polymorpha HOM05D006848 ORTHO05D008445 2.7e-55 219.5 171 60.8
Manes.10G144600 Manihot esculenta HOM05D006848 ORTHO05D008445 1.5e-53 213.8 201 61.2
Actinidia36713 Actinidia chinensis HOM05D006848 ORTHO05D008445 7.3e-53 211.5 132 75.8
CBR_g23941 Chara braunii HOM05D006848 ORTHO05D008445 9.8e-50 201.1 170 56.5
Dinv43453 Davidia involucrata HOM05D006848 ORTHO05D008445 2.1e-47 193.4 218 59.6
CDE05G3657 Ceratophyllum demersum HOM05D000031 ORTHO05D008445 7.3e-45 184.9 124 70.2
RcHm_v2.0_Chr1g0315791 Rosa chinensis HOM05D006848 ORTHO05D008445 4.7e-44 182.2 120 69.2
Hma1.2p1_0137F.1_g062450 Hydrangea macrophylla HOM05D006848 ORTHO05D008445 2.9e-41 172.9 124 70.2
Actinidia24670 Actinidia chinensis HOM05D006848 ORTHO05D008445 8.9e-35 151.4 105 70.5
MCO14G442 Micromonas commoda HOM05D006848 ORTHO05D008445 6.0e-23 112.1 172 36.6
Cre03.g198850 Chlamydomonas reinhardtii HOM05D006848 ORTHO05D008445 1.5e-18 97.4 174 31.6
SEGI_20764 Sequoiadendron giganteum HOM05D006848 ORTHO05D008445 2.4e-16 90.1 96 50.0
PRCOL_00004469 Prasinoderma coloniale HOM05D006848 ORTHO05D008445 3.0e-14 83.2 175 33.1
A04p00030 Brassica napus HOM05D006848 ORTHO05D008445 3.2e-08 63.2 50 58.0
DCAR_031498 Daucus carota HOM05D006773 ORTHO05D008775 5.5e-08 62.4 152 31.6
Lsat_1_v5_gn_6_96860 Lactuca sativa HOM05D006773 ORTHO05D008775 1.8e-06 57.4 152 27.6
HanXRQChr05g0160801 Helianthus annuus HOM05D006773 ORTHO05D008775 5.1e-06 55.8 151 27.8
ECA246G0400 Erigeron canadensis HOM05D006773 ORTHO05D005980 8.7e-06 55.1 151 27.2


User provided reference genes

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