Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold167G38441 Striga asiatica HOM05D008019 ORTHO05D010184 2.0e-82 308.9 140 100.0
MSTRG.17046 Avicennia marina HOM05D008019 ORTHO05D010184 2.0e-58 229.2 147 74.1
Oeu010780.1 Olea europaea HOM05D008019 ORTHO05D010184 2.1e-55 219.2 120 81.7
SalBow5G2002 Salvia bowleyana HOM05D008019 ORTHO05D010184 2.1e-55 219.2 142 71.8
Thecc.01G411900 Theobroma cacao HOM05D008019 ORTHO05D010184 1.1e-53 213.4 149 67.1
Cc02_g27810 Coffea canephora HOM05D008019 ORTHO05D010184 1.5e-53 213.0 122 75.4
Ciclev10033035m.g Citrus clementina HOM05D008019 ORTHO05D010184 3.3e-53 211.8 140 70.0
Dinv43452 Davidia involucrata HOM05D008019 ORTHO05D010184 5.6e-53 211.1 106 84.9
Prupe.2G012100 Prunus persica HOM05D008019 ORTHO05D010184 5.6e-53 211.1 108 81.5
Lj9A631G50 Lonicera japonica HOM05D008019 ORTHO05D010184 3.6e-52 208.4 116 75.9
Manes.07G005100 Manihot esculenta HOM05D008019 ORTHO05D010184 3.6e-52 208.4 140 67.9
QL04p007219 Quercus lobata HOM05D008019 ORTHO05D010184 4.7e-52 208.0 104 84.6
MD02G1313500 Malus domestica HOM05D008019 ORTHO05D010184 6.2e-52 207.6 110 80.9
Nn2g15438 Nelumbo nucifera HOM05D008019 ORTHO05D010184 6.2e-52 207.6 115 77.4
VMungo1127G0775 Vigna mungo HOM05D008019 ORTHO05D010184 6.2e-52 207.6 108 77.8
Phvul.011G212700 Phaseolus vulgaris HOM05D008019 ORTHO05D010184 8.1e-52 207.2 104 81.7
TWI09G1168 Tripterygium wilfordii HOM05D008019 ORTHO05D010184 8.1e-52 207.2 105 84.8
GSVIVG01032075001 Vitis vinifera HOM05D008019 ORTHO05D010184 1.8e-51 206.1 105 82.9
Cfa010760 Carpinus fangiana HOM05D008019 ORTHO05D010184 2.3e-51 205.7 105 83.8
Glyma.12G238000 Glycine max HOM05D008019 ORTHO05D010184 2.3e-51 205.7 105 81.0
MELO3C023543.2 Cucumis melo HOM05D008019 ORTHO05D010184 3.1e-51 205.3 123 74.8
CsaV3_7G031160 Cucumis sativus L. HOM05D008019 ORTHO05D010184 3.1e-51 205.3 123 75.6
HanXRQChr01g0016161 Helianthus annuus HOM05D008019 ORTHO05D010184 3.1e-51 205.3 111 78.4
ClCG09G004230 Citrullus lanatus HOM05D008019 ORTHO05D010184 5.2e-51 204.5 141 66.0
Eucgr.J01265 Eucalyptus grandis HOM05D008019 ORTHO05D010184 5.2e-51 204.5 105 82.9
Gohir.A12G094001 Gossypium hirsutum HOM05D008019 ORTHO05D010184 6.8e-51 204.1 106 81.1
TAR623G0854 Trochodendron aralioides HOM05D008019 ORTHO05D010184 6.8e-51 204.1 105 82.9
CSS0044570 Camellia sinensis var. sinensis HOM05D008019 ORTHO05D010184 8.9e-51 203.8 106 81.1
Haze_03214 Corylus avellana HOM05D008019 ORTHO05D010184 8.9e-51 203.8 105 82.9
PGR044G0644 Punica granatum HOM05D008019 ORTHO05D010184 8.9e-51 203.8 105 81.0
arahy.Tifrunner.gnm1.ann1.SF3C2I Arachis hypogaea HOM05D008019 ORTHO05D010184 1.2e-50 203.4 108 79.6
arahy.Tifrunner.gnm1.ann1.V37GBM Arachis hypogaea HOM05D008019 ORTHO05D010184 1.2e-50 203.4 108 79.6
CAN.G1155.15 Capsicum annuum HOM05D008019 ORTHO05D010184 1.2e-50 203.4 114 77.2
Duzib138G0215 Durio zibethinus HOM05D008019 ORTHO05D010184 1.2e-50 203.4 150 64.7
RcHm_v2.0_Chr1g0315801 Rosa chinensis HOM05D008019 ORTHO05D010184 1.2e-50 203.4 105 81.0
COL.COLO4_23925 Corchorus olitorius HOM05D008019 ORTHO05D010184 1.5e-50 203.0 106 80.2
Potri.009G062400 Populus trichocarpa HOM05D008019 ORTHO05D010184 1.5e-50 203.0 106 83.0
unitig_750.g28450 Utricularia gibba HOM05D008019 ORTHO05D010184 2.0e-50 202.6 145 64.1
ECA248G1827 Erigeron canadensis HOM05D008019 ORTHO05D010184 3.4e-50 201.8 110 76.4
Lsat_1_v5_gn_1_107820 Lactuca sativa HOM05D008019 ORTHO05D010184 3.4e-50 201.8 111 76.6
CANSAT80G0909 Cannabis sativa HOM05D008019 ORTHO05D010184 5.8e-50 201.1 130 66.2
Potri.001G268000 Populus trichocarpa HOM05D008019 ORTHO05D010184 5.8e-50 201.1 105 81.0
TAR623G1004 Trochodendron aralioides HOM05D008019 ORTHO05D010184 7.6e-50 200.7 105 81.0
FvH4_7g00910 Fragaria vesca HOM05D008019 ORTHO05D010184 1.7e-49 199.5 106 81.1
FAN06G1027 Fragaria x ananassa HOM05D008019 ORTHO05D010184 2.2e-49 199.1 106 81.1
MBI04_g13624_MAGBIO Magnolia biondii HOM05D008019 ORTHO05D010184 2.2e-49 199.1 108 77.8
Actinidia31058 Actinidia chinensis HOM05D008019 ORTHO05D010184 2.9e-49 198.7 106 78.3
FAN01G0739 Fragaria x ananassa HOM05D008019 ORTHO05D010184 3.8e-49 198.4 106 80.2
Lj3g0025736 Lotus japonicus HOM05D008019 ORTHO05D010184 4.9e-49 198.0 105 78.1
THA.LOC104819690 Tarenaya hassleriana HOM05D008019 ORTHO05D010184 4.9e-49 198.0 108 76.9
Rhsim07G0054900 Rhododendron simsii HOM05D008019 ORTHO05D010184 8.4e-49 197.2 145 64.1
CDE05G1162 Ceratophyllum demersum HOM05D008019 ORTHO05D010184 1.1e-48 196.8 140 64.3
TPR.G1886 Trifolium pratense HOM05D008019 ORTHO05D010184 1.4e-48 196.4 105 75.2
Aqoxy7G00800 Aquilegia oxysepala HOM05D008019 ORTHO05D010184 5.4e-48 194.5 105 77.1
Gorai.008G105200 Gossypium raimondii HOM05D008019 ORTHO05D010184 1.6e-47 193.0 113 73.5
Os09g0485800 Oryza sativa ssp. japonica HOM05D008019 ORTHO05D010184 7.8e-47 190.7 105 76.2
FAN10G3815 Fragaria x ananassa HOM05D008019 ORTHO05D010184 2.5e-45 185.7 104 76.9
SEGI_23902 Sequoiadendron giganteum HOM05D008019 ORTHO05D010184 5.6e-45 184.5 107 72.0
Sabra09G0046100 Salix brachista HOM05D000752 ORTHO05D000572 2.8e-44 182.2 90 84.4
vmacro13657 Vaccinium macrocarpon HOM05D008019 ORTHO05D010184 3.1e-43 178.7 154 55.2
Migut.B01317 Erythranthe guttata HOM05D008019 ORTHO05D010184 8.9e-43 177.2 88 85.2
Sed0006336 Sechium edule HOM05D008019 ORTHO05D010184 3.2e-40 168.7 108 70.4
Pp3c14_7420 Physcomitrium patens HOM05D008019 ORTHO05D010184 3.5e-39 165.2 109 62.4
FAN03G3138 Fragaria x ananassa HOM05D008019 ORTHO05D010184 1.7e-38 162.9 101 71.3
Lalb_Chr19g0132131 Lupinus albus HOM05D008019 ORTHO05D010184 1.7e-38 162.9 77 85.7
Hund19732 Selenicereus undatus HOM05D008019 ORTHO05D010184 2.8e-36 155.6 84 79.8
ATR0605G214 Amborella trichopoda HOM05D008019 ORTHO05D010184 6.9e-35 151.0 97 69.1
Sc10g0000030 Simmondsia chinensis HOM05D008019 ORTHO05D010184 9.3e-32 140.6 74 81.1
Zm00001eb101800 Zea mays HOM05D008019 ORTHO05D010184 2.1e-28 129.4 74 70.3
Zm00001eb101810 Zea mays HOM05D008019 ORTHO05D010184 2.8e-28 129.0 74 70.3
Gohir.D12G096933 Gossypium hirsutum HOM05D008019 ORTHO05D010184 1.8e-22 109.8 58 79.3
SEGI_33125 Sequoiadendron giganteum HOM05D008019 ORTHO05D010184 1.9e-16 89.7 51 68.6
Lalb_Chr19g0132141 Lupinus albus HOM05D008019 ORTHO05D010184 3.9e-06 55.5 29 75.9
SEGI_37443 Sequoiadendron giganteum HOM05D008019 ORTHO05D010184 3.9e-06 55.5 38 55.3


User provided reference genes

Program Settings