Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold167G38415 Striga asiatica HOM05D005210 ORTHO05D010080 7.1e-105 384.0 206 100.0
SGA_v2.0_scaffold119G32726 Striga asiatica HOM05D005210 ORTHO05D010080 1.9e-94 349.4 206 85.9
MSTRG.20585 Avicennia marina HOM05D005210 ORTHO05D010080 8.4e-82 307.4 206 74.8
Migut.B01305 Erythranthe guttata HOM05D005210 ORTHO05D010080 1.0e-74 283.9 203 68.0
SalBow8G1406 Salvia bowleyana HOM05D005210 ORTHO05D010080 3.6e-72 275.4 203 68.0
unitig_750.g28447 Utricularia gibba HOM05D005210 ORTHO05D010080 1.6e-69 266.5 206 66.5
Oeu020894.1 Olea europaea HOM05D005210 ORTHO05D010080 1.2e-64 250.4 201 60.7
TPR.G32363 Trifolium pratense HOM05D005210 ORTHO05D010080 4.5e-51 205.3 201 50.2
TPR.G22447 Trifolium pratense HOM05D005210 ORTHO05D010080 9.4e-49 197.6 201 48.3
CANSAT78G1777 Cannabis sativa HOM05D005210 ORTHO05D010080 2.7e-48 196.1 198 50.5
Medtr6g012880 Medicago truncatula HOM05D005210 ORTHO05D010080 8.8e-47 191.0 202 49.5
Atru.chr1.3624 Acer truncatum HOM05D005210 ORTHO05D010080 1.5e-46 190.3 199 50.8
AUR62004733 Chenopodium quinoa HOM05D005210 ORTHO05D010080 3.3e-46 189.1 200 49.5
AUR62037526 Chenopodium quinoa HOM05D005210 ORTHO05D010080 3.3e-46 189.1 200 49.5
Lsat_1_v5_gn_7_109460 Lactuca sativa HOM05D005210 ORTHO05D010080 3.3e-46 189.1 199 47.2
Lj6g0026306 Lotus japonicus HOM05D005210 ORTHO05D010080 9.7e-46 187.6 200 49.0
Nn1g09997 Nelumbo nucifera HOM05D005210 ORTHO05D010080 9.1e-44 181.0 197 51.3
Nn1g10098 Nelumbo nucifera HOM05D005210 ORTHO05D010080 9.1e-44 181.0 197 51.3
Nitab4.5_0000299g0070 Nicotiana tabacum HOM05D005210 ORTHO05D010080 3.5e-43 179.1 199 47.7
DCAR_032434 Daucus carota HOM05D005210 ORTHO05D010080 2.9e-42 176.0 203 50.2
Aqoxy4G00327 Aquilegia oxysepala HOM05D005210 ORTHO05D010080 1.1e-41 174.1 202 47.5
Gohir.A10G199900 Gossypium hirsutum HOM05D005210 ORTHO05D010080 1.1e-41 174.1 211 48.8
PGR069G0003 Punica granatum HOM05D005210 ORTHO05D010080 1.5e-41 173.7 203 50.2
Gohir.A10G200000 Gossypium hirsutum HOM05D005210 ORTHO05D010080 4.2e-41 172.2 209 47.8
Ciclev10012798m.g Citrus clementina HOM05D005210 ORTHO05D010080 5.5e-41 171.8 200 47.5
Gorai.011G233600 Gossypium raimondii HOM05D005210 ORTHO05D010080 7.2e-41 171.4 209 47.8
ECA236G2402 Erigeron canadensis HOM05D005210 ORTHO05D010080 1.2e-40 170.6 199 41.2
Gohir.D10G207900 Gossypium hirsutum HOM05D005210 ORTHO05D010080 1.2e-40 170.6 209 47.4
Phvul.005G088636 Phaseolus vulgaris HOM05D005210 ORTHO05D010080 2.3e-39 166.4 201 51.2
Oeu061104.1 Olea europaea HOM05D000700 ORTHO05D010080 6.8e-39 164.9 137 56.9
CAN.G787.10 Capsicum annuum HOM05D005210 ORTHO05D010080 2.6e-38 162.9 199 47.7
Nitab4.5_0001788g0200 Nicotiana tabacum HOM05D001750 ORTHO05D001825 5.7e-38 161.8 204 44.1
Ah.03g133380 Amaranthus hybridus HOM05D005210 ORTHO05D010080 1.7e-37 160.2 201 41.8
Actinidia34888 Actinidia chinensis HOM05D005210 ORTHO05D010080 3.1e-36 156.0 177 49.7
MBI04_g15069_MAGBIO Magnolia biondii HOM05D005210 ORTHO05D010080 5.9e-35 151.8 190 47.4
Nitab4.5_0006085g0020 Nicotiana tabacum HOM05D005210 ORTHO05D010080 1.7e-34 150.2 197 43.1
Cpa.g.sc38.57 Carica papaya HOM05D005210 ORTHO05D010080 8.6e-34 147.9 178 49.4
Cfa023010 Carpinus fangiana HOM05D005210 ORTHO05D010080 6.1e-32 141.7 161 46.0
SEGI_01777 Sequoiadendron giganteum HOM05D005210 ORTHO05D010080 2.3e-31 139.8 218 38.5
Potri.007G062102 Populus trichocarpa HOM05D005210 ORTHO05D010080 6.8e-31 138.3 220 42.3
Nitab4.5_0001761g0130 Nicotiana tabacum HOM05D005210 ORTHO05D010080 7.5e-30 134.8 163 44.8
arahy.Tifrunner.gnm1.ann1.00SNP9 Arachis hypogaea HOM05D005210 ORTHO05D010080 2.2e-29 133.3 178 45.5
arahy.Tifrunner.gnm1.ann1.883WGW Arachis hypogaea HOM05D005210 ORTHO05D010080 2.2e-29 133.3 178 45.5
Dinv06682 Davidia involucrata HOM05D005210 ORTHO05D010080 2.8e-29 132.9 157 49.0
Lalb_Chr03g0038991 Lupinus albus HOM05D005210 ORTHO05D010080 1.1e-28 131.0 158 45.6
Lalb_Chr02g0153671 Lupinus albus HOM05D005210 ORTHO05D010080 9.2e-28 127.9 188 40.4
CAN.G110.12 Capsicum annuum HOM05D005210 ORTHO05D010080 1.2e-27 127.5 145 47.6
Migut.B01023 Erythranthe guttata HOM05D005210 ORTHO05D010080 1.6e-27 127.1 179 42.5
arahy.Tifrunner.gnm1.ann1.QPLA3G Arachis hypogaea HOM05D005210 ORTHO05D010080 3.5e-27 125.9 169 45.6
VMungo0329G0007 Vigna mungo HOM05D005210 ORTHO05D010080 4.5e-27 125.6 169 42.0
CAN.G1109.4 Capsicum annuum HOM05D005210 ORTHO05D010080 1.3e-26 124.0 145 46.9
RcHm_v2.0_MTg0498311 Rosa chinensis HOM05D005210 ORTHO05D010080 3.8e-26 122.5 148 47.3
MELO3C028549.2 Cucumis melo HOM05D005210 ORTHO05D010080 3.3e-25 119.4 174 42.5
Peaxi162Scf01267g00005 Petunia axillaris HOM05D005210 ORTHO05D010080 2.8e-24 116.3 118 49.2
GSVIVG01004978001 Vitis vinifera HOM05D005210 ORTHO05D010080 2.8e-24 116.3 104 53.8
RcHm_v2.0_Chr2g0148221 Rosa chinensis HOM05D005210 ORTHO05D010080 4.7e-24 115.5 113 51.3
Nitab4.5_0000172g0080 Nicotiana tabacum HOM05D001750 ORTHO05D001825 4.0e-23 112.5 171 43.9
Ca_15051_v3 Cicer arietinum L. HOM05D001750 ORTHO05D010080 1.5e-22 110.5 144 43.1
Nitab4.5_0003632g0030 Nicotiana tabacum HOM05D005210 ORTHO05D034847 2.9e-21 106.3 118 44.9
PGSC0003DMG400020779 Solanum tuberosum HOM05D005210 ORTHO05D010080 7.8e-19 98.2 93 51.6
Ca_22167_v3 Cicer arietinum L. HOM05D001750 ORTHO05D001825 7.3e-17 91.7 135 39.3
Ca_22168_v3 Cicer arietinum L. HOM05D001750 ORTHO05D001825 7.3e-17 91.7 135 39.3
Ca_22173_v3 Cicer arietinum L. HOM05D005210 ORTHO05D010080 7.3e-17 91.7 135 39.3
CsaV3_UNG210330 Cucumis sativus L. HOM05D001560 ORTHO05D004675 5.2e-15 85.5 130 42.3
RcHm_v2.0_Chr2g0148231 Rosa chinensis HOM05D005210 ORTHO05D010080 3.4e-14 82.8 81 55.6
Hma1.2p1_0038F.1_g024120 Hydrangea macrophylla HOM05D005210 ORTHO05D010080 1.1e-12 77.8 73 52.1
Lalb_Chr17g0337341 Lupinus albus HOM05D005210 ORTHO05D010080 4.1e-12 75.9 60 58.3
Ciclev10017151m.g Citrus clementina HOM05D005210 ORTHO05D010080 3.5e-11 72.8 90 40.0
Nitab4.5_0001152g0440 Nicotiana tabacum HOM05D005210 ORTHO05D010080 3.0e-10 69.7 61 50.8
QL04p020150 Quercus lobata HOM05D005210 ORTHO05D010080 3.3e-09 66.2 107 44.9
Sed0004476 Sechium edule HOM05D005210 ORTHO05D010080 3.3e-09 66.2 92 39.1
CAN.G85.22 Capsicum annuum HOM05D002660 ORTHO05D003902 3.6e-08 62.8 99 37.4
Peaxi162Scf01462g00001 Petunia axillaris HOM05D005210 ORTHO05D010080 8.1e-08 61.6 100 38.0
Lalb_Chr03g0038471 Lupinus albus HOM05D005210 ORTHO05D010080 2.3e-07 60.1 49 49.0


User provided reference genes

Program Settings