Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold166G38395 Striga asiatica HOM05D014716 ORTHO05D010054 2.3e-128 462.2 227 100.0
SGA_v2.0_scaffold309G48184 Striga asiatica HOM05D014716 ORTHO05D010054 1.9e-34 150.2 190 50.0
SGA_v2.0_scaffold108G30934 Striga asiatica HOM05D000045 ORTHO05D010054 5.5e-34 148.7 77 96.1
SGA_v2.0_scaffold85G26700 Striga asiatica HOM05D000045 ORTHO05D000695 5.9e-20 102.1 142 40.1
SGA_v2.0_scaffold86G26862 Striga asiatica HOM05D000045 ORTHO05D010054 6.1e-17 92.0 227 30.8
SGA_v2.0_scaffold41G15762 Striga asiatica HOM05D014716 ORTHO05D000695 2.2e-14 83.6 163 36.8
EL10Ac3g06665 Beta vulgaris HOM05D000045 ORTHO05D000067 6.6e-11 72.0 163 27.6
EL10Ac5g11586 Beta vulgaris HOM05D000045 ORTHO05D000067 7.3e-10 68.6 136 29.4
EL10Ac6g14806 Beta vulgaris HOM05D000045 ORTHO05D000067 4.7e-09 65.9 162 27.2
EL10Ac5g12499 Beta vulgaris HOM05D000045 ORTHO05D000067 2.3e-08 63.5 162 26.5
EL10Ac3g06581 Beta vulgaris HOM05D000045 ORTHO05D000067 1.5e-07 60.8 73 38.4
EL10Ac4g08128 Beta vulgaris HOM05D000045 ORTHO05D000067 1.5e-07 60.8 89 34.8
EL10Ac6g13792 Beta vulgaris HOM05D000045 ORTHO05D000067 1.5e-07 60.8 73 38.4
EL10Ac8g19696 Beta vulgaris HOM05D000045 ORTHO05D000067 2.0e-07 60.5 162 25.9
EL10Ac2g02717 Beta vulgaris HOM05D000045 ORTHO05D000067 3.4e-07 59.7 73 38.4
EL10As3g23329 Beta vulgaris HOM05D000045 ORTHO05D000067 3.4e-07 59.7 73 38.4
EL10Ac2g03088 Beta vulgaris HOM05D000045 ORTHO05D010054 4.4e-07 59.3 73 38.4
EL10Ac3g06371 Beta vulgaris HOM05D000045 ORTHO05D000067 7.5e-07 58.5 73 38.4
EL10Ac4g08127 Beta vulgaris HOM05D000045 ORTHO05D000067 7.5e-07 58.5 89 33.7
EL10Ac4g09892 Beta vulgaris HOM05D000045 ORTHO05D000067 7.5e-07 58.5 89 33.7
Ah.07g198010 Amaranthus hybridus HOM05D000045 ORTHO05D010054 9.8e-07 58.2 74 43.2
EL10Ac9g21079 Beta vulgaris HOM05D000045 ORTHO05D000695 1.7e-06 57.4 121 28.9
SGA_v2.0_scaffold11G05825 Striga asiatica HOM05D009041 ORTHO05D010054 1.7e-06 57.4 74 37.8
SGA_v2.0_scaffold180G39666 Striga asiatica HOM05D000045 ORTHO05D010054 1.7e-06 57.4 74 37.8
SGA_v2.0_scaffold21G09437 Striga asiatica HOM05D009041 ORTHO05D010054 1.7e-06 57.4 114 32.5
SGA_v2.0_scaffold5G02531 Striga asiatica HOM05D009041 ORTHO05D010054 2.2e-06 57.0 74 37.8
ECA246G0965 Erigeron canadensis HOM05D000045 ORTHO05D000067 6.4e-06 55.5 119 31.1
SGA_v2.0_scaffold79G25579 Striga asiatica HOM05D009041 ORTHO05D010054 6.4e-06 55.5 74 36.5


User provided reference genes

Program Settings