Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold166G38359 Striga asiatica HOM05D000572 ORTHO05D015581 1.2e-98 363.2 184 100.0
SGA_v2.0_scaffold10G05099 Striga asiatica HOM05D000572 ORTHO05D000840 1.3e-30 137.1 205 44.4
SalBow5G2083 Salvia bowleyana HOM05D000572 ORTHO05D000840 3.3e-29 132.5 205 43.9
SalBow5G5613 Salvia bowleyana HOM05D000572 ORTHO05D000840 3.3e-29 132.5 205 43.9
unitig_22.g6328 Utricularia gibba HOM05D000572 ORTHO05D000840 8.2e-28 127.9 205 42.9
arahy.Tifrunner.gnm1.ann1.V66FSB Arachis hypogaea HOM05D000572 ORTHO05D000840 2.4e-27 126.3 136 55.9
Migut.N00173 Erythranthe guttata HOM05D000572 ORTHO05D000840 2.4e-27 126.3 201 42.8
MSTRG.21845 Avicennia marina HOM05D000572 ORTHO05D000840 1.2e-26 124.0 201 42.8
Actinidia36979 Actinidia chinensis HOM05D000572 ORTHO05D000840 8.5e-25 117.9 217 39.2
CAN.G907.24 Capsicum annuum HOM05D000572 ORTHO05D000840 5.5e-24 115.2 201 40.8
Oeu034362.1 Olea europaea HOM05D000572 ORTHO05D000840 7.2e-24 114.8 205 40.0
Rhsim02G0022800 Rhododendron simsii HOM05D000572 ORTHO05D000840 9.4e-24 114.4 217 37.8
Nitab4.5_0000795g0040 Nicotiana tabacum HOM05D000572 ORTHO05D000840 1.2e-23 114.0 205 40.0
Nitab4.5_0008386g0010 Nicotiana tabacum HOM05D000572 ORTHO05D000840 1.2e-23 114.0 205 40.0
Actinidia08504 Actinidia chinensis HOM05D000572 ORTHO05D000840 1.0e-22 110.9 204 39.2
Dinv44509 Davidia involucrata HOM05D000572 ORTHO05D000840 1.4e-22 110.5 205 39.5
GSVIVG01017933001 Vitis vinifera HOM05D000572 ORTHO05D000840 3.0e-22 109.4 205 39.5
Cc03_g03520 Coffea canephora HOM05D000572 ORTHO05D000840 3.9e-22 109.0 205 38.0
TAR636G1672 Trochodendron aralioides HOM05D000572 ORTHO05D000840 5.1e-22 108.6 205 39.0
Dinv38429 Davidia involucrata HOM05D000572 ORTHO05D000840 1.5e-21 107.1 205 38.5
Gorai.011G168600 Gossypium raimondii HOM05D000572 ORTHO05D000840 1.3e-20 104.0 213 36.2
Aqoxy2G03356 Aquilegia oxysepala HOM05D000572 ORTHO05D000840 2.8e-20 102.8 203 37.4
MD13G1188900 Malus domestica HOM05D000572 ORTHO05D000840 2.8e-20 102.8 212 38.7
PGR004G2523 Punica granatum HOM05D000572 ORTHO05D000840 2.8e-20 102.8 217 37.3
Duzib212G0457 Durio zibethinus HOM05D000572 ORTHO05D000840 3.7e-20 102.4 213 36.2
Prupe.1G156000 Prunus persica HOM05D000572 ORTHO05D000840 3.7e-20 102.4 215 39.1
CiPaw.01G164100 Carya illinoinensis HOM05D000572 ORTHO05D000840 8.2e-20 101.3 204 37.3
TWI73G0146 Tripterygium wilfordii HOM05D000572 ORTHO05D000840 8.2e-20 101.3 218 36.7
ATR0332G025 Amborella trichopoda HOM05D000572 ORTHO05D000840 1.1e-19 100.9 205 35.6
QL06p003211 Quercus lobata HOM05D000572 ORTHO05D000840 1.1e-19 100.9 215 36.3
Sabra10G0053200 Salix brachista HOM05D000572 ORTHO05D000840 1.1e-19 100.9 205 36.6
VMungo1215G0056 Vigna mungo HOM05D000572 ORTHO05D000840 1.4e-19 100.5 201 37.8
Potri.010G090100 Populus trichocarpa HOM05D000572 ORTHO05D000840 1.8e-19 100.1 192 38.0
Sc19g0004290 Simmondsia chinensis HOM05D000572 ORTHO05D000840 1.8e-19 100.1 201 38.3
Lj3A740G52 Lonicera japonica HOM05D000572 ORTHO05D000840 2.4e-19 99.8 205 36.6
DCAR_027188 Daucus carota HOM05D000572 ORTHO05D000840 3.1e-19 99.4 205 36.1
MD16G1189700 Malus domestica HOM05D000572 ORTHO05D000840 3.1e-19 99.4 212 36.3
Nn1g02253 Nelumbo nucifera HOM05D000572 ORTHO05D000840 4.1e-19 99.0 205 35.6
Phvul.002G047000 Phaseolus vulgaris HOM05D000572 ORTHO05D000840 5.3e-19 98.6 201 37.3
Glyma.01G239000 Glycine max HOM05D000572 ORTHO05D000840 6.9e-19 98.2 201 37.3
Glyma.11G004600 Glycine max HOM05D000572 ORTHO05D000840 6.9e-19 98.2 201 37.3
Lsat_1_v5_gn_7_65741 Lactuca sativa HOM05D000572 ORTHO05D000840 6.9e-19 98.2 205 36.1
Sed0013775 Sechium edule HOM05D000572 ORTHO05D000840 6.9e-19 98.2 191 38.2
ECA240G0830 Erigeron canadensis HOM05D000572 ORTHO05D000840 9.1e-19 97.8 213 35.2
FvH4_4g15130 Fragaria vesca HOM05D000572 ORTHO05D000840 9.1e-19 97.8 212 36.3
Thecc.04G227900 Theobroma cacao HOM05D000572 ORTHO05D000840 9.1e-19 97.8 213 36.6
Ciclev10004375m.g Citrus clementina HOM05D000572 ORTHO05D000840 1.2e-18 97.4 205 36.1
Gohir.A01G023500 Gossypium hirsutum HOM05D000572 ORTHO05D000840 1.2e-18 97.4 205 37.6
Psat4g212280 Pisum sativum HOM05D000572 ORTHO05D000840 1.2e-18 97.4 201 36.8
CiPaw.02G095700 Carya illinoinensis HOM05D000572 ORTHO05D000840 1.5e-18 97.1 204 37.3
TPR.G37927 Trifolium pratense HOM05D000572 ORTHO05D000840 1.5e-18 97.1 201 36.8
RcHm_v2.0_Chr4g0416741 Rosa chinensis HOM05D000572 ORTHO05D000840 2.0e-18 96.7 204 37.3
Sopen09g030610 Solanum pennellii HOM05D000572 ORTHO05D000840 2.6e-18 96.3 103 53.4
Lj1g0004536 Lotus japonicus HOM05D000572 ORTHO05D000840 3.4e-18 95.9 201 36.8
CANSAT78G1323 Cannabis sativa HOM05D000572 ORTHO05D000840 4.5e-18 95.5 204 36.8
ClCG06G006050 Citrullus lanatus HOM05D000572 ORTHO05D000840 4.5e-18 95.5 191 37.7
HanXRQChr10g0303141 Helianthus annuus HOM05D000572 ORTHO05D000840 4.5e-18 95.5 213 35.2
Peaxi162Scf00437g00326 Petunia axillaris HOM05D000572 ORTHO05D000840 4.5e-18 95.5 233 34.8
Solyc09g075800.4 Solanum lycopersicum HOM05D000572 ORTHO05D000840 4.5e-18 95.5 103 53.4
TWI09G1185 Tripterygium wilfordii HOM05D000572 ORTHO05D000840 4.5e-18 95.5 218 34.9
MELO3C014487.2 Cucumis melo HOM05D000572 ORTHO05D000840 5.9e-18 95.1 191 37.7
Gohir.D01G021500 Gossypium hirsutum HOM05D000572 ORTHO05D000840 7.7e-18 94.7 205 37.1
Gorai.002G024000 Gossypium raimondii HOM05D000572 ORTHO05D000840 7.7e-18 94.7 205 37.1
MBI04_g17680_MAGBIO Magnolia biondii HOM05D000572 ORTHO05D000840 1.0e-17 94.4 175 38.9
CSS0034253 Camellia sinensis var. sinensis HOM05D000572 ORTHO05D000840 1.3e-17 94.0 103 51.5
Gohir.D10G151400 Gossypium hirsutum HOM05D000572 ORTHO05D000840 1.7e-17 93.6 214 34.6
Lalb_Chr09g0319771 Lupinus albus HOM05D000572 ORTHO05D000840 2.9e-17 92.8 192 37.5
PSO302G0089 Papaver somniferum HOM05D000572 ORTHO05D000840 6.5e-17 91.7 103 49.5
CsaV3_6G038240 Cucumis sativus L. HOM05D000572 ORTHO05D000840 8.5e-17 91.3 191 37.2
PSO170G4847 Papaver somniferum HOM05D000572 ORTHO05D000840 8.5e-17 91.3 103 49.5
MBI04_g33422_MAGBIO Magnolia biondii HOM05D000572 ORTHO05D000840 1.1e-16 90.9 115 47.8
Duzib151G0489 Durio zibethinus HOM05D000572 ORTHO05D000840 1.4e-16 90.5 237 32.1
Atru.chr4.2505 Acer truncatum HOM05D000572 ORTHO05D000840 3.2e-16 89.4 209 35.4
SEGI_35846 Sequoiadendron giganteum HOM05D000572 ORTHO05D000840 3.2e-16 89.4 205 35.1
Sed0002312 Sechium edule HOM05D000572 ORTHO05D000840 4.2e-16 89.0 191 36.1
CDE05G0240 Ceratophyllum demersum HOM05D000572 ORTHO05D000840 2.1e-15 86.7 103 52.4
Manes.15G027000 Manihot esculenta HOM05D000572 ORTHO05D000840 2.7e-15 86.3 103 51.5
Eucgr.H03545 Eucalyptus grandis HOM05D000572 ORTHO05D000840 2.3e-14 83.2 117 48.7
Haze_00923 Corylus avellana HOM05D000572 ORTHO05D000840 3.9e-14 82.4 107 44.9
Thhalv10003643m.g Eutrema salsugineum HOM05D000572 ORTHO05D000840 8.8e-14 81.3 103 48.5
Nn4g26268 Nelumbo nucifera HOM05D000572 ORTHO05D000840 8.8e-14 81.3 216 32.4
THA.LOC104818777 Tarenaya hassleriana HOM05D000572 ORTHO05D000840 8.8e-14 81.3 103 48.5
BcaNung02813 Brassica carinata HOM05D000572 ORTHO05D000840 1.1e-13 80.9 103 48.5
BcaNung03971 Brassica carinata HOM05D000572 ORTHO05D000840 1.1e-13 80.9 103 48.5
C07p41790 Brassica napus HOM05D000572 ORTHO05D000840 1.1e-13 80.9 104 48.1
BolC7t44710H Brassica oleracea HOM05D000572 ORTHO05D000840 1.1e-13 80.9 104 48.1
COL.COLO4_06192 Corchorus olitorius HOM05D000572 ORTHO05D000840 1.5e-13 80.5 103 46.6
Cfa015621 Carpinus fangiana HOM05D000572 ORTHO05D000840 3.3e-13 79.3 107 43.9
arahy.Tifrunner.gnm1.ann1.SGT6TA Arachis hypogaea HOM05D000572 ORTHO05D000840 5.7e-13 78.6 103 48.5
A06p36740 Brassica napus HOM05D000572 ORTHO05D000840 5.7e-13 78.6 104 47.1
BraA06t26596Z Brassica rapa HOM05D000572 ORTHO05D000840 5.7e-13 78.6 104 47.1
Medtr5g005990 Medicago truncatula HOM05D000572 ORTHO05D000840 5.7e-13 78.6 103 45.6
Aa31LG11G10300 Aethionema arabicum HOM05D000572 ORTHO05D000840 9.7e-13 77.8 103 47.6
Ca_24388_v3 Cicer arietinum L. HOM05D000572 ORTHO05D000840 9.7e-13 77.8 103 47.6
Sp2g21510 Schrenkiella parvula HOM05D000572 ORTHO05D000840 9.7e-13 77.8 103 47.6
SMO358G0691 Selaginella moellendorffii HOM05D000572 ORTHO05D000840 1.3e-12 77.4 192 32.3
Os03g0695700 Oryza sativa ssp. japonica HOM05D000572 ORTHO05D000840 2.2e-12 76.6 120 41.7
AT5G26240 Arabidopsis thaliana HOM05D000572 ORTHO05D000840 4.8e-12 75.5 103 46.6
Carub.0006s2406 Capsella rubella HOM05D000572 ORTHO05D000840 4.8e-12 75.5 103 46.6
Eucgr.F01498 Eucalyptus grandis HOM05D000572 ORTHO05D000840 8.2e-12 74.7 103 46.6
AL6G38250 Arabidopsis lyrata HOM05D000572 ORTHO05D000840 1.1e-11 74.3 103 46.6
THA.LOC104802763 Tarenaya hassleriana HOM05D000572 ORTHO05D000840 1.4e-11 73.9 103 45.6
FAN12G4122 Fragaria x ananassa HOM05D000572 ORTHO05D000840 1.8e-11 73.6 148 37.8
AagrBONN_evm.TU.Sc2ySwM_228.2587 Anthoceros agrestis HOM05D000572 ORTHO05D000840 3.1e-11 72.8 202 32.7
FAN07G2506 Fragaria x ananassa HOM05D000572 ORTHO05D000840 4.1e-11 72.4 148 37.2
Zm00001eb053800 Zea mays HOM05D000572 ORTHO05D000840 4.1e-11 72.4 120 40.8
Pp3c23_11120 Physcomitrium patens HOM05D000572 ORTHO05D000840 4.5e-10 68.9 176 35.8
vmacro15328 Vaccinium macrocarpon HOM05D000572 ORTHO05D000840 4.5e-10 68.9 217 30.0
HPP92_024872 Vanilla planifolia HOM05D000572 ORTHO05D000840 4.5e-10 68.9 104 41.3
Cpa.g.sc508.1 Carica papaya HOM05D000572 ORTHO05D015581 3.8e-09 65.9 87 47.1
Mapoly0061s0111 Marchantia polymorpha HOM05D000572 ORTHO05D000840 3.8e-09 65.9 120 36.7
Pp3c23_5320 Physcomitrium patens HOM05D000572 ORTHO05D000840 3.8e-09 65.9 192 31.2
Ah.13g073920 Amaranthus hybridus HOM05D000572 ORTHO05D000840 2.3e-06 56.6 129 34.1
EL10Ac3g06440 Beta vulgaris HOM05D000572 ORTHO05D000840 6.7e-06 55.1 116 36.2


User provided reference genes

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