Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold166G38349 Striga asiatica HOM05D006231 ORTHO05D007857 8.4e-194 680.2 361 100.0
MSTRG.613 Avicennia marina HOM05D006231 ORTHO05D007857 7.3e-97 358.2 355 57.7
SalBow2G0481 Salvia bowleyana HOM05D006231 ORTHO05D007857 1.8e-95 353.6 355 59.4
Migut.L01438 Erythranthe guttata HOM05D006231 ORTHO05D007857 2.1e-91 340.1 359 56.5
Oeu046714.1 Olea europaea HOM05D006231 ORTHO05D007857 2.8e-88 329.7 377 52.0
unitig_22.g6476 Utricularia gibba HOM05D006231 ORTHO05D007857 5.8e-78 295.4 302 55.3
vmacro16274 Vaccinium macrocarpon HOM05D006231 ORTHO05D007857 5.6e-73 278.9 327 49.8
PGSC0003DMG400004132 Solanum tuberosum HOM05D006231 ORTHO05D007857 2.8e-72 276.6 369 46.6
Nitab4.5_0004963g0030 Nicotiana tabacum HOM05D006231 ORTHO05D007857 3.6e-72 276.2 355 47.0
Actinidia15012 Actinidia chinensis HOM05D006231 ORTHO05D007857 8.1e-72 275.0 299 50.5
Dinv24894 Davidia involucrata HOM05D006231 ORTHO05D007857 1.1e-71 274.6 326 49.4
Nitab4.5_0001474g0130 Nicotiana tabacum HOM05D006231 ORTHO05D007857 3.1e-71 273.1 355 46.8
CAN.G505.18 Capsicum annuum HOM05D006231 ORTHO05D007857 2.0e-70 270.4 357 47.1
ClCG05G025120 Citrullus lanatus HOM05D006231 ORTHO05D007857 1.7e-69 267.3 334 47.6
Cc11_g14350 Coffea canephora HOM05D006231 ORTHO05D007857 1.7e-69 267.3 325 48.3
Ciclev10032202m.g Citrus clementina HOM05D006231 ORTHO05D007857 3.8e-69 266.2 357 45.7
CsaV3_5G031780 Cucumis sativus L. HOM05D006231 ORTHO05D007857 4.9e-69 265.8 330 47.6
Sopen05g001920 Solanum pennellii HOM05D006231 ORTHO05D007857 4.9e-69 265.8 369 44.7
CSS0002380 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 1.1e-68 264.6 365 44.9
Hma1.2p1_1017F.1_g248270 Hydrangea macrophylla HOM05D006231 ORTHO05D007857 1.4e-68 264.2 326 46.6
CSS0044234 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 1.9e-68 263.8 367 44.7
Thecc.02G247800 Theobroma cacao HOM05D006231 ORTHO05D007857 1.9e-68 263.8 291 50.2
MELO3C012017.2 Cucumis melo HOM05D006231 ORTHO05D007857 7.1e-68 261.9 347 46.1
Gohir.D05G320900 Gossypium hirsutum HOM05D006231 ORTHO05D007857 3.5e-67 259.6 316 48.1
Gorai.009G344200 Gossypium raimondii HOM05D006231 ORTHO05D007857 4.6e-67 259.2 316 47.5
FvH4_4g34910 Fragaria vesca HOM05D006231 ORTHO05D007857 6.0e-67 258.8 393 44.5
FAN17G2958 Fragaria x ananassa HOM05D006231 ORTHO05D007857 1.0e-66 258.1 368 46.7
Lj3A1049T58 Lonicera japonica HOM05D006231 ORTHO05D007857 1.0e-66 258.1 258 55.0
FAN22G0458 Fragaria x ananassa HOM05D006231 ORTHO05D007857 1.8e-66 257.3 375 46.1
FAN07G0090 Fragaria x ananassa HOM05D006231 ORTHO05D007857 5.1e-66 255.8 368 45.9
THA.LOC104822957 Tarenaya hassleriana HOM05D006231 ORTHO05D007857 1.9e-65 253.8 338 45.3
QL03p062170 Quercus lobata HOM05D006231 ORTHO05D007857 2.5e-65 253.4 369 44.2
Manes.01G197500 Manihot esculenta HOM05D006231 ORTHO05D007857 3.3e-65 253.1 307 46.6
Haze_12158 Corylus avellana HOM05D006231 ORTHO05D007857 4.3e-65 252.7 274 53.6
Rhsim12G0123300 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.3e-64 251.1 265 53.2
CiPaw.05G148900 Carya illinoinensis HOM05D006231 ORTHO05D007857 1.6e-64 250.8 345 45.2
Gohir.A05G318600 Gossypium hirsutum HOM05D006231 ORTHO05D007857 1.6e-64 250.8 300 48.7
Peaxi162Scf00421g00419 Petunia axillaris HOM05D006231 ORTHO05D007857 2.1e-64 250.4 359 44.6
Duzib248G0169 Durio zibethinus HOM05D006231 ORTHO05D007857 2.8e-64 250.0 334 46.1
Cfa009127 Carpinus fangiana HOM05D006231 ORTHO05D007857 3.7e-64 249.6 370 44.1
arahy.Tifrunner.gnm1.ann1.FQS9XH Arachis hypogaea HOM05D006231 ORTHO05D007857 4.8e-64 249.2 298 47.7
arahy.Tifrunner.gnm1.ann1.XK2UET Arachis hypogaea HOM05D006231 ORTHO05D007857 4.8e-64 249.2 372 43.8
Lalb_Chr09g0326451 Lupinus albus HOM05D006231 ORTHO05D007857 4.8e-64 249.2 270 50.4
Eucgr.B02548 Eucalyptus grandis HOM05D006231 ORTHO05D007857 6.2e-64 248.8 329 45.6
FAN12G2615 Fragaria x ananassa HOM05D006231 ORTHO05D007857 6.2e-64 248.8 379 44.3
RcHm_v2.0_Chr4g0444351 Rosa chinensis HOM05D006231 ORTHO05D007857 6.2e-64 248.8 396 43.2
CSS0037524 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 8.1e-64 248.4 293 47.1
Hund25325 Selenicereus undatus HOM05D006231 ORTHO05D007857 8.1e-64 248.4 324 46.6
TAR629G0133 Trochodendron aralioides HOM05D006231 ORTHO05D007857 8.1e-64 248.4 354 42.4
Nn4g22867 Nelumbo nucifera HOM05D006231 ORTHO05D007857 1.1e-63 248.1 268 50.7
Psat2g109920 Pisum sativum HOM05D006231 ORTHO05D007857 1.1e-63 248.1 358 44.7
Aa31LG7G7830 Aethionema arabicum HOM05D006231 ORTHO05D007857 1.4e-63 247.7 272 49.3
AL1G37790 Arabidopsis lyrata HOM05D006231 ORTHO05D007857 1.4e-63 247.7 310 44.8
Ca_04621_v3 Cicer arietinum L. HOM05D006231 ORTHO05D007857 4.0e-63 246.1 265 50.6
Gohir.D02G165000 Gossypium hirsutum HOM05D006231 ORTHO05D007857 6.9e-63 245.4 302 47.7
THA.LOC104822056 Tarenaya hassleriana HOM05D006231 ORTHO05D007857 6.9e-63 245.4 263 49.8
Sed0009573 Sechium edule HOM05D006231 ORTHO05D007857 9.0e-63 245.0 357 42.9
Atru.chr11.1975 Acer truncatum HOM05D006231 ORTHO05D007857 1.2e-62 244.6 261 51.7
CANSAT01G1818 Cannabis sativa HOM05D006231 ORTHO05D007857 1.2e-62 244.6 266 50.4
BcaB07g32378 Brassica carinata HOM05D006231 ORTHO05D007857 1.5e-62 244.2 261 49.8
COL.COLO4_19536 Corchorus olitorius HOM05D006231 ORTHO05D007857 1.5e-62 244.2 299 47.5
CARHR024340 Cardamine hirsuta HOM05D006231 ORTHO05D007857 2.6e-62 243.4 308 44.5
Aqoxy3G00933 Aquilegia oxysepala HOM05D006231 ORTHO05D007857 4.5e-62 242.7 331 44.7
C05p23180 Brassica napus HOM05D006231 ORTHO05D007857 4.5e-62 242.7 255 49.8
Thhalv10008192m.g Eutrema salsugineum HOM05D006231 ORTHO05D007857 5.8e-62 242.3 314 44.3
AT1G24040 Arabidopsis thaliana HOM05D006231 ORTHO05D007857 7.6e-62 241.9 308 44.2
AUR62005324 Chenopodium quinoa HOM05D006231 ORTHO05D007857 1.3e-61 241.1 313 47.6
Prupe.1G258300 Prunus persica HOM05D006231 ORTHO05D007857 1.7e-61 240.7 278 50.0
Medtr5g035060 Medicago truncatula HOM05D006231 ORTHO05D007857 2.2e-61 240.4 367 43.1
BcaC05g26301 Brassica carinata HOM05D006231 ORTHO05D007857 2.9e-61 240.0 263 49.0
BolC5t31019H Brassica oleracea HOM05D006231 ORTHO05D007857 2.9e-61 240.0 263 49.0
TWI36G0577 Tripterygium wilfordii HOM05D006231 ORTHO05D007857 3.8e-61 239.6 299 46.5
PGR119G0912 Punica granatum HOM05D006231 ORTHO05D007857 4.9e-61 239.2 330 43.9
TPR.G4354 Trifolium pratense HOM05D006231 ORTHO05D007857 4.9e-61 239.2 317 46.1
MD16G1088300 Malus domestica HOM05D006231 ORTHO05D007857 8.4e-61 238.4 309 46.3
PSO478G5064 Papaver somniferum HOM05D006231 ORTHO05D007857 1.1e-60 238.0 364 41.2
Sp1g21370 Schrenkiella parvula HOM05D006231 ORTHO05D007857 1.1e-60 238.0 306 42.8
EL10Ac6g13629 Beta vulgaris HOM05D006231 ORTHO05D007857 1.4e-60 237.7 312 46.2
Carub.0001s2346 Capsella rubella HOM05D006231 ORTHO05D007857 1.9e-60 237.3 307 43.6
PSO017G5161 Papaver somniferum HOM05D006231 ORTHO05D007857 4.2e-60 236.1 370 40.3
Sc11g0001330 Simmondsia chinensis HOM05D006231 ORTHO05D007857 4.2e-60 236.1 324 44.8
Lsat_1_v5_gn_8_158260 Lactuca sativa HOM05D006231 ORTHO05D007857 5.5e-60 235.7 313 45.4
Sabra10G0068400 Salix brachista HOM05D006231 ORTHO05D007857 1.2e-59 234.6 349 41.5
Lj2g0015887 Lotus japonicus HOM05D006231 ORTHO05D007857 1.6e-59 234.2 259 49.8
DCAR_024529 Daucus carota HOM05D006231 ORTHO05D007857 4.6e-59 232.6 241 52.3
Potri.008G146000 Populus trichocarpa HOM05D006231 ORTHO05D007857 6.0e-59 232.3 270 47.4
Glyma.01G034200 Glycine max HOM05D006231 ORTHO05D007857 2.3e-58 230.3 362 43.9
AUR62013974 Chenopodium quinoa HOM05D006231 ORTHO05D007857 3.0e-58 229.9 313 45.7
ECA233G1652 Erigeron canadensis HOM05D006231 ORTHO05D007857 3.9e-58 229.6 317 43.8
MD13G1088000 Malus domestica HOM05D006231 ORTHO05D007857 5.1e-58 229.2 277 48.4
Ah.03g132450 Amaranthus hybridus HOM05D006231 ORTHO05D007857 6.7e-58 228.8 260 47.7
HanXRQChr08g0208971 Helianthus annuus HOM05D006231 ORTHO05D007857 1.9e-57 227.3 345 42.6
Potri.010G095800 Populus trichocarpa HOM05D006231 ORTHO05D007857 5.7e-57 225.7 270 48.1
Glyma.02G032100 Glycine max HOM05D006231 ORTHO05D007857 2.1e-56 223.8 333 43.8
A09p40810 Brassica napus HOM05D006231 ORTHO05D007857 9.0e-55 218.4 245 47.3
BraA09t39576Z Brassica rapa HOM05D006231 ORTHO05D007857 9.0e-55 218.4 245 47.3
CDE10G0954 Ceratophyllum demersum HOM05D006231 ORTHO05D007857 3.2e-52 209.9 255 46.3
Sabra08G0111000 Salix brachista HOM05D006231 ORTHO05D007857 1.2e-51 208.0 248 46.8
VMungo1215G3085 Vigna mungo HOM05D006231 ORTHO05D007857 2.1e-51 207.2 278 43.5
Phvul.002G073400 Phaseolus vulgaris HOM05D006231 ORTHO05D007857 4.6e-51 206.1 338 40.5
MBI15_g12952_MAGBIO Magnolia biondii HOM05D006231 ORTHO05D007857 2.5e-49 200.3 257 44.4
HPP92_010904 Vanilla planifolia HOM05D006231 ORTHO05D007857 1.4e-47 194.5 257 43.6
SEGI_07841 Sequoiadendron giganteum HOM05D006231 ORTHO05D007857 2.6e-46 190.3 254 42.9
ATR1149G099 Amborella trichopoda HOM05D006231 ORTHO05D007857 1.0e-45 188.3 228 46.9
CDE10G0637 Ceratophyllum demersum HOM05D006231 ORTHO05D007857 1.3e-45 188.0 238 46.6
Gorai.005G184900 Gossypium raimondii HOM05D006231 ORTHO05D007857 3.8e-45 186.4 302 40.4
GSVIVG01020181001 Vitis vinifera HOM05D006231 ORTHO05D007857 4.2e-44 183.0 190 50.5
Solyc05g005890.2 Solanum lycopersicum HOM05D006231 ORTHO05D007857 1.2e-43 181.4 191 51.3
Zm00001eb424460 Zea mays HOM05D006231 ORTHO05D007857 5.1e-42 176.0 283 38.5
Os04g0465500 Oryza sativa ssp. japonica HOM05D006231 ORTHO05D007857 2.8e-40 170.2 266 40.2
Medtr5g035040 Medicago truncatula HOM05D006231 ORTHO05D007857 1.1e-39 168.3 265 41.5
Psat2g109880 Pisum sativum HOM05D006231 ORTHO05D007857 2.0e-38 164.1 230 45.2
Gohir.A03G141850 Gossypium hirsutum HOM05D006231 ORTHO05D007857 3.2e-36 156.8 135 60.0
SEGI_36756 Sequoiadendron giganteum HOM05D006231 ORTHO05D007857 3.6e-35 153.3 256 37.5
Zm00001eb348680 Zea mays HOM05D006231 ORTHO05D007857 6.7e-34 149.1 280 35.7
Pp3c2_6130 Physcomitrium patens HOM05D006231 ORTHO05D007857 9.7e-33 145.2 263 36.1
Pp3c2_6132 Physcomitrium patens HOM05D006231 ORTHO05D007857 9.7e-33 145.2 263 36.1
Mapoly0005s0071 Marchantia polymorpha HOM05D006231 ORTHO05D007857 3.7e-32 143.3 273 34.8
SMO365G0079 Selaginella moellendorffii HOM05D006231 ORTHO05D007857 2.6e-25 120.6 245 31.8
Medtr5g035050 Medicago truncatula HOM05D006231 ORTHO05D007857 3.1e-23 113.6 80 68.8
Dinv31098 Davidia involucrata HOM05D006231 ORTHO05D007857 8.5e-21 105.5 86 59.3
AagrBONN_evm.TU.Sc2ySwM_368.2752 Anthoceros agrestis HOM05D006231 ORTHO05D007857 4.0e-18 96.7 226 31.9
CBR_g40430 Chara braunii HOM05D017800 ORTHO05D019665 2.8e-16 90.5 261 28.4
TAR622G0489 Trochodendron aralioides HOM05D006231 ORTHO05D007857 4.0e-10 70.1 58 58.6


User provided reference genes

Program Settings