Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold166G38343 Striga asiatica HOM05D000842 ORTHO05D000650 5.0e-79 297.7 154 100.0
SGA_v2.0_scaffold413G51175 Striga asiatica HOM05D004214 ORTHO05D004963 2.4e-28 129.4 179 48.0
MSTRG.21235 Avicennia marina HOM05D000842 ORTHO05D000650 4.2e-17 92.0 167 38.9
Migut.D00852 Erythranthe guttata HOM05D000842 ORTHO05D000650 6.6e-15 84.7 167 37.7
CSS0029835 Camellia sinensis var. sinensis HOM05D000842 ORTHO05D000650 1.3e-13 80.5 167 36.5
Lj1A127G60 Lonicera japonica HOM05D000842 ORTHO05D000650 1.4e-12 77.0 170 33.5
Hma1.2p1_2630F.1_g325720 Hydrangea macrophylla HOM05D000842 ORTHO05D000650 2.4e-12 76.3 170 32.9
Peaxi162Scf00239g00098 Petunia axillaris HOM05D000842 ORTHO05D000650 2.4e-12 76.3 167 34.1
CSS0048360 Camellia sinensis var. sinensis HOM05D000842 ORTHO05D000650 4.0e-12 75.5 165 36.4
MBI03_g33624_MAGBIO Magnolia biondii HOM05D000842 ORTHO05D000650 6.9e-12 74.7 170 35.3
TWI31G0085 Tripterygium wilfordii HOM05D000842 ORTHO05D000650 9.0e-12 74.3 170 35.3
Glyma.14G197800 Glycine max HOM05D000842 ORTHO05D000650 1.2e-11 73.9 170 32.4
Actinidia34476 Actinidia chinensis HOM05D000842 ORTHO05D000650 1.5e-11 73.6 165 33.9
Dinv28686 Davidia involucrata HOM05D000842 ORTHO05D000650 2.6e-11 72.8 167 34.1
Glyma.02G230700 Glycine max HOM05D000842 ORTHO05D000650 2.6e-11 72.8 170 32.9
MD03G1060200 Malus domestica HOM05D000842 ORTHO05D000650 2.6e-11 72.8 165 34.5
Phvul.008G257500 Phaseolus vulgaris HOM05D000842 ORTHO05D000650 2.6e-11 72.8 174 31.6
VMungo0647G1673 Vigna mungo HOM05D000842 ORTHO05D000650 2.6e-11 72.8 174 31.0
Medtr5g072760 Medicago truncatula HOM05D000842 ORTHO05D000650 3.4e-11 72.4 171 32.7
GSVIVG01024666001 Vitis vinifera HOM05D000842 ORTHO05D000650 7.6e-11 71.2 165 33.3
Nn2g10984 Nelumbo nucifera HOM05D000842 ORTHO05D000650 9.9e-11 70.9 165 32.7
Nitab4.5_0000046g0050 Nicotiana tabacum HOM05D000842 ORTHO05D000650 9.9e-11 70.9 165 31.5
Solyc09g055700.4 Solanum lycopersicum HOM05D000842 ORTHO05D000650 1.3e-10 70.5 169 32.0
Sopen09g018970 Solanum pennellii HOM05D000842 ORTHO05D000650 1.3e-10 70.5 169 32.0
SGA_v2.0_scaffold196G41003 Striga asiatica HOM05D000842 ORTHO05D399806 1.3e-10 70.5 125 41.6
CAN.G1477.1 Capsicum annuum HOM05D000842 ORTHO05D000650 1.7e-10 70.1 170 31.8
ClCG03G000280 Citrullus lanatus HOM05D000842 ORTHO05D000650 1.7e-10 70.1 173 32.9
Psat6g139640 Pisum sativum HOM05D000842 ORTHO05D000650 1.7e-10 70.1 169 32.0
HPP92_026124 Vanilla planifolia HOM05D000842 ORTHO05D000650 1.7e-10 70.1 167 32.3
Oeu034089.3 Olea europaea HOM05D000842 ORTHO05D000650 2.2e-10 69.7 136 36.0
vmacro14616 Vaccinium macrocarpon HOM05D000842 ORTHO05D000650 2.2e-10 69.7 167 32.9
Prupe.6G050600 Prunus persica HOM05D000842 ORTHO05D000650 2.9e-10 69.3 165 34.5
PGR102G2939 Punica granatum HOM05D000842 ORTHO05D000650 4.9e-10 68.6 171 32.7
Nn3g20957 Nelumbo nucifera HOM05D000842 ORTHO05D000650 1.1e-09 67.4 165 30.3
QL01p040006 Quercus lobata HOM05D000842 ORTHO05D000650 1.1e-09 67.4 170 31.2
CsaV3_1G036640 Cucumis sativus L. HOM05D000842 ORTHO05D000650 1.4e-09 67.0 173 33.5
CANSAT54G1405 Cannabis sativa HOM05D000842 ORTHO05D000650 1.9e-09 66.6 170 31.8
TAR633G2814 Trochodendron aralioides HOM05D000842 ORTHO05D000650 1.9e-09 66.6 165 32.1
Zm00001eb322370 Zea mays HOM05D000842 ORTHO05D000650 1.9e-09 66.6 170 28.8
QL08p024827 Quercus lobata HOM05D000842 ORTHO05D000650 4.2e-09 65.5 172 30.2
ATR0680G176 Amborella trichopoda HOM05D000842 ORTHO05D000650 5.5e-09 65.1 163 31.3
Glyma.08G149000 Glycine max HOM05D000842 ORTHO05D000650 5.5e-09 65.1 170 32.4
Thecc.09G355800 Theobroma cacao HOM05D000842 ORTHO05D000650 5.5e-09 65.1 170 30.0
Cfa019507 Carpinus fangiana HOM05D000842 ORTHO05D000650 1.2e-08 63.9 172 30.2
FvH4_3g39520 Fragaria vesca HOM05D000842 ORTHO05D000650 1.2e-08 63.9 171 32.7
FAN11G2963 Fragaria x ananassa HOM05D000842 ORTHO05D000650 1.2e-08 63.9 171 32.7
Sabra16G0252400 Salix brachista HOM05D000842 ORTHO05D000650 1.2e-08 63.9 171 30.4
SHI19196 Sapria himalayana HOM05D000842 ORTHO05D000650 1.2e-08 63.9 170 31.8
TAR627G1038 Trochodendron aralioides HOM05D000842 ORTHO05D000650 1.2e-08 63.9 171 29.2
FAN25G2914 Fragaria x ananassa HOM05D000842 ORTHO05D000650 2.7e-08 62.8 171 32.7
LjContig00141g0019488 Lotus japonicus HOM05D000842 ORTHO05D000650 2.7e-08 62.8 169 30.2
Manes.03G078500 Manihot esculenta HOM05D000842 ORTHO05D000650 2.7e-08 62.8 171 28.1
RcHm_v2.0_Chr5g0071291 Rosa chinensis HOM05D000842 ORTHO05D000650 2.7e-08 62.8 171 31.0
Haze_08444 Corylus avellana HOM05D000842 ORTHO05D000650 3.5e-08 62.4 172 29.7
MELO3C025674.2 Cucumis melo HOM05D000842 ORTHO05D000650 3.5e-08 62.4 173 28.9
CsaV3_4G032790 Cucumis sativus L. HOM05D000842 ORTHO05D000650 3.5e-08 62.4 173 28.9
FvH4_3g17610 Fragaria vesca HOM05D000842 ORTHO05D000650 3.5e-08 62.4 171 28.7
FAN16G3507 Fragaria x ananassa HOM05D000842 ORTHO05D000650 3.5e-08 62.4 171 28.7
Glyma.15G269300 Glycine max HOM05D000842 ORTHO05D000650 3.5e-08 62.4 170 31.8
RcHm_v2.0_Chr5g0029311 Rosa chinensis HOM05D000842 ORTHO05D000650 3.5e-08 62.4 171 28.7
Sc03g0010740 Simmondsia chinensis HOM05D000842 ORTHO05D000650 3.5e-08 62.4 171 29.2
Atru.chr3.4132 Acer truncatum HOM05D000842 ORTHO05D000650 4.6e-08 62.0 165 30.9
Eucgr.B02221 Eucalyptus grandis HOM05D000842 ORTHO05D000650 4.6e-08 62.0 175 29.7
FAN16G0745 Fragaria x ananassa HOM05D000842 ORTHO05D000650 4.6e-08 62.0 171 32.7
FAN21G1765 Fragaria x ananassa HOM05D000842 ORTHO05D000650 4.6e-08 62.0 171 32.2
Manes.02G216400 Manihot esculenta HOM05D000842 ORTHO05D000650 4.6e-08 62.0 171 29.8
VMungo1080G0610 Vigna mungo HOM05D000842 ORTHO05D000650 4.6e-08 62.0 170 31.8
FAN25G0524 Fragaria x ananassa HOM05D000842 ORTHO05D000650 6.0e-08 61.6 171 28.7
PSO541G2069 Papaver somniferum HOM05D000842 ORTHO05D000650 6.0e-08 61.6 171 28.7
TAR629G1485 Trochodendron aralioides HOM05D000842 ORTHO05D000650 6.0e-08 61.6 171 30.4
Psat1g128080 Pisum sativum HOM05D000842 ORTHO05D000650 7.9e-08 61.2 171 29.2
Sed0019393 Sechium edule HOM05D000842 ORTHO05D000650 7.9e-08 61.2 171 31.0
Lalb_Chr04g0252021 Lupinus albus HOM05D000842 ORTHO05D000650 1.0e-07 60.8 171 29.8
Potri.001G382700 Populus trichocarpa HOM05D000842 ORTHO05D000650 1.0e-07 60.8 165 30.3
Sc21g0005200 Simmondsia chinensis HOM05D000842 ORTHO05D000650 1.0e-07 60.8 165 28.5
GSVIVG01021318001 Vitis vinifera HOM05D000842 ORTHO05D000650 1.0e-07 60.8 174 29.3
FAN11G0959 Fragaria x ananassa HOM05D000842 ORTHO05D000650 1.3e-07 60.5 171 28.1
FAN21G0331 Fragaria x ananassa HOM05D000842 ORTHO05D000650 1.3e-07 60.5 171 28.1
CDE01G0231 Ceratophyllum demersum HOM05D000842 ORTHO05D000650 1.8e-07 60.1 173 27.7
Ca_05641_v3 Cicer arietinum L. HOM05D000842 ORTHO05D000650 1.8e-07 60.1 169 30.8
Dinv13354 Davidia involucrata HOM05D000842 ORTHO05D000650 1.8e-07 60.1 171 28.1
Prupe.4G155500 Prunus persica HOM05D000842 ORTHO05D000650 1.8e-07 60.1 171 28.1
Hund05032 Selenicereus undatus HOM05D000842 ORTHO05D000650 1.8e-07 60.1 165 30.3
Gorai.009G112800 Gossypium raimondii HOM05D000842 ORTHO05D000650 2.3e-07 59.7 186 32.8
TWI39G0754 Tripterygium wilfordii HOM05D000842 ORTHO05D000650 2.3e-07 59.7 171 27.5
Aqoxy1G01306 Aquilegia oxysepala HOM05D000842 ORTHO05D000650 3.0e-07 59.3 170 29.4
arahy.Tifrunner.gnm1.ann1.BXGR3K Arachis hypogaea HOM05D000842 ORTHO05D000650 3.0e-07 59.3 169 29.6
CDE12G0673 Ceratophyllum demersum HOM05D000842 ORTHO05D000650 3.0e-07 59.3 167 29.3
Lsat_1_v5_gn_9_18420 Lactuca sativa HOM05D000842 ORTHO05D000650 3.0e-07 59.3 170 29.4
Phvul.005G039800 Phaseolus vulgaris HOM05D000842 ORTHO05D000650 3.0e-07 59.3 170 30.6
CiPaw.13G071300 Carya illinoinensis HOM05D000842 ORTHO05D000650 5.1e-07 58.5 129 31.0
Ciclev10021239m.g Citrus clementina HOM05D000842 ORTHO05D000650 5.1e-07 58.5 171 28.7
Dinv09662 Davidia involucrata HOM05D000842 ORTHO05D000650 5.1e-07 58.5 170 30.6
Eucgr.F03229 Eucalyptus grandis HOM05D000842 ORTHO05D000650 5.1e-07 58.5 171 27.5
Gohir.D05G108600 Gossypium hirsutum HOM05D000842 ORTHO05D000650 5.1e-07 58.5 186 32.3
Nn6g34387 Nelumbo nucifera HOM05D000842 ORTHO05D000650 5.1e-07 58.5 171 28.1
PSO339G0819 Papaver somniferum HOM05D000842 ORTHO05D000650 5.1e-07 58.5 167 29.9
arahy.Tifrunner.gnm1.ann1.Y57QNR Arachis hypogaea HOM05D000842 ORTHO05D000650 6.7e-07 58.2 169 29.0
COL.COLO4_03606 Corchorus olitorius HOM05D000842 ORTHO05D000650 6.7e-07 58.2 167 29.9
MD03G1250800 Malus domestica HOM05D000842 ORTHO05D000650 6.7e-07 58.2 171 28.1
THA.LOC104822582 Tarenaya hassleriana HOM05D000842 ORTHO05D000650 6.7e-07 58.2 164 28.7
TPR.G11742 Trifolium pratense HOM05D000842 ORTHO05D000650 6.7e-07 58.2 170 28.8
Ca_02945_v3 Cicer arietinum L. HOM05D000842 ORTHO05D000650 8.7e-07 57.8 170 30.0
Thecc.07G134900 Theobroma cacao HOM05D000842 ORTHO05D000650 8.7e-07 57.8 167 28.1
CiPaw.11G155400 Carya illinoinensis HOM05D000842 ORTHO05D000650 1.1e-06 57.4 172 29.1
Potri.001G281400 Populus trichocarpa HOM05D000842 ORTHO05D000650 1.1e-06 57.4 170 29.4
Gohir.D01G037700 Gossypium hirsutum HOM05D000842 ORTHO05D000650 1.5e-06 57.0 167 28.1
Gorai.002G046000 Gossypium raimondii HOM05D000842 ORTHO05D000650 1.5e-06 57.0 167 28.1
EL10Ac4g08436 Beta vulgaris HOM05D000842 ORTHO05D000650 1.9e-06 56.6 171 27.5
ClCG11G017130 Citrullus lanatus HOM05D000842 ORTHO05D000650 1.9e-06 56.6 173 27.2
MD11G1271000 Malus domestica HOM05D000842 ORTHO05D000650 1.9e-06 56.6 171 27.5
Medtr2g060900 Medicago truncatula HOM05D000842 ORTHO05D000650 1.9e-06 56.6 170 30.0
Phvul.006G003500 Phaseolus vulgaris HOM05D000842 ORTHO05D000650 1.9e-06 56.6 104 35.6
ECA236G2583 Erigeron canadensis HOM05D000842 ORTHO05D000650 2.5e-06 56.2 175 26.9
ECA247G2646 Erigeron canadensis HOM05D000842 ORTHO05D000650 2.5e-06 56.2 175 28.6
Lj3g0009813 Lotus japonicus HOM05D000842 ORTHO05D000650 2.5e-06 56.2 170 31.2
PGR031G0859 Punica granatum HOM05D000842 ORTHO05D000650 4.3e-06 55.5 173 27.7
CSS0037827 Camellia sinensis var. sinensis HOM05D000842 ORTHO05D000650 5.6e-06 55.1 171 26.3
Gohir.A05G108400 Gossypium hirsutum HOM05D000842 ORTHO05D000650 5.6e-06 55.1 172 31.4
TWI38G0350 Tripterygium wilfordii HOM05D000842 ORTHO05D000650 5.6e-06 55.1 176 25.6
Zm00001eb211990 Zea mays HOM05D000842 ORTHO05D000650 5.6e-06 55.1 168 28.0
Actinidia23867 Actinidia chinensis HOM05D000842 ORTHO05D000650 7.4e-06 54.7 50 58.0
Cc05_g10630 Coffea canephora HOM05D000842 ORTHO05D000650 7.4e-06 54.7 171 28.7
Os03g0818000 Oryza sativa ssp. japonica HOM05D000842 ORTHO05D000650 7.4e-06 54.7 55 50.9
arahy.Tifrunner.gnm1.ann1.68BB74 Arachis hypogaea HOM05D000842 ORTHO05D000650 9.6e-06 54.3 167 29.3
MELO3C020505.2 Cucumis melo HOM05D000842 ORTHO05D000650 9.6e-06 54.3 196 28.1


User provided reference genes

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