Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold166G38315 Striga asiatica HOM05D007154 ORTHO05D008945 3.8e-140 501.5 254 100.0
SGA_v2.0_scaffold249G44952 Striga asiatica HOM05D007154 ORTHO05D008945 2.0e-72 276.6 150 94.0
Oeu019256.1 Olea europaea HOM05D007154 ORTHO05D008945 2.8e-42 176.4 151 60.3
SalBow4G2238 Salvia bowleyana HOM05D007154 ORTHO05D008945 6.2e-42 175.3 150 64.0
Migut.B01210 Erythranthe guttata HOM05D007154 ORTHO05D008945 8.9e-41 171.4 156 59.0
GSVIVG01034352001 Vitis vinifera HOM05D007154 ORTHO05D008945 1.2e-40 171.0 140 64.3
Cc00_g03880 Coffea canephora HOM05D007154 ORTHO05D008945 2.0e-40 170.2 157 58.6
Ciclev10016869m.g Citrus clementina HOM05D007154 ORTHO05D008945 2.6e-40 169.9 167 55.1
Atru.chr11.40 Acer truncatum HOM05D007154 ORTHO05D008945 2.9e-39 166.4 147 61.9
Cfa018670 Carpinus fangiana HOM05D007154 ORTHO05D008945 3.7e-39 166.0 138 60.9
Dinv01916 Davidia involucrata HOM05D007154 ORTHO05D008945 4.9e-39 165.6 122 64.8
Actinidia04367 Actinidia chinensis HOM05D007154 ORTHO05D008945 1.4e-38 164.1 128 60.2
MD13G1001100 Malus domestica HOM05D007154 ORTHO05D008945 2.1e-37 160.2 144 57.6
Prupe.1G351600 Prunus persica HOM05D007154 ORTHO05D008945 2.7e-37 159.8 150 58.0
Solyc04g008770.3 Solanum lycopersicum HOM05D007154 ORTHO05D008945 7.8e-37 158.3 150 58.0
Sopen04g003950 Solanum pennellii HOM05D007154 ORTHO05D008945 7.8e-37 158.3 150 58.0
AUR62023198 Chenopodium quinoa HOM05D007154 ORTHO05D008945 1.0e-36 157.9 139 57.6
DCAR_030346 Daucus carota HOM05D007154 ORTHO05D008945 1.0e-36 157.9 137 59.1
Lalb_Chr01g0013651 Lupinus albus HOM05D007154 ORTHO05D008945 1.0e-36 157.9 135 61.5
Potri.010G254600 Populus trichocarpa HOM05D007154 ORTHO05D008945 1.0e-36 157.9 142 56.3
PGSC0003DMG400025308 Solanum tuberosum HOM05D007154 ORTHO05D008945 1.0e-36 157.9 151 57.6
Gohir.A04G109800 Gossypium hirsutum HOM05D007154 ORTHO05D008945 2.3e-36 156.8 117 64.1
Sabra10G0198000 Salix brachista HOM05D007154 ORTHO05D008945 3.9e-36 156.0 142 55.6
Peaxi162Scf00329g00212 Petunia axillaris HOM05D007154 ORTHO05D008945 5.1e-36 155.6 156 56.4
TWI53G1167 Tripterygium wilfordii HOM05D007154 ORTHO05D008945 5.1e-36 155.6 150 55.3
CANSAT78G1733 Cannabis sativa HOM05D007154 ORTHO05D008945 6.6e-36 155.2 144 57.6
EL10Ac2g04490 Beta vulgaris HOM05D007154 ORTHO05D008945 8.6e-36 154.8 124 59.7
Ah.10g037940 Amaranthus hybridus HOM05D007154 ORTHO05D008945 1.5e-35 154.1 142 57.7
Aqoxy3G04335 Aquilegia oxysepala HOM05D007154 ORTHO05D008945 3.3e-35 152.9 122 62.3
CSS0036440 Camellia sinensis var. sinensis HOM05D007154 ORTHO05D008945 3.3e-35 152.9 125 60.8
Gorai.012G136600 Gossypium raimondii HOM05D007154 ORTHO05D008945 3.3e-35 152.9 122 63.1
Gohir.D04G150000 Gossypium hirsutum HOM05D007154 ORTHO05D008945 7.3e-35 151.8 122 63.1
Glyma.07G039300 Glycine max HOM05D007154 ORTHO05D008945 9.5e-35 151.4 143 58.7
QL01p000323 Quercus lobata HOM05D007154 ORTHO05D008945 9.5e-35 151.4 115 63.5
THA.LOC104800635 Tarenaya hassleriana HOM05D007154 ORTHO05D008945 9.5e-35 151.4 141 57.4
arahy.Tifrunner.gnm1.ann1.408I3G Arachis hypogaea HOM05D007154 ORTHO05D008945 1.2e-34 151.0 119 64.7
RcHm_v2.0_Chr4g0447181 Rosa chinensis HOM05D007154 ORTHO05D008945 1.2e-34 151.0 145 55.9
TAR371G0017 Trochodendron aralioides HOM05D007154 ORTHO05D008945 1.2e-34 151.0 141 56.0
CAN.G419.16 Capsicum annuum HOM05D007154 ORTHO05D008945 1.6e-34 150.6 159 54.7
Thecc.02G152200 Theobroma cacao HOM05D007154 ORTHO05D008945 1.6e-34 150.6 145 54.5
arahy.Tifrunner.gnm1.ann1.JHQS48 Arachis hypogaea HOM05D007154 ORTHO05D008945 6.2e-34 148.7 118 62.7
CDE04G0025 Ceratophyllum demersum HOM05D007154 ORTHO05D008945 6.2e-34 148.7 136 55.1
COL.COLO4_33150 Corchorus olitorius HOM05D007154 ORTHO05D008945 6.2e-34 148.7 144 55.6
FAN17G3039 Fragaria x ananassa HOM05D007154 ORTHO05D008945 6.2e-34 148.7 137 57.7
AUR62023245 Chenopodium quinoa HOM05D007154 ORTHO05D008945 8.1e-34 148.3 139 54.7
FAN07G0022 Fragaria x ananassa HOM05D007154 ORTHO05D008945 8.1e-34 148.3 135 57.8
Lsat_1_v5_gn_9_117140 Lactuca sativa HOM05D007154 ORTHO05D008945 8.1e-34 148.3 118 61.0
AL6G34660 Arabidopsis lyrata HOM05D007154 ORTHO05D008945 1.1e-33 147.9 123 58.5
Sed0008143 Sechium edule HOM05D007154 ORTHO05D008945 1.1e-33 147.9 153 51.6
Lj3g0022846 Lotus japonicus HOM05D007154 ORTHO05D008945 1.4e-33 147.5 138 57.2
Manes.04G160900 Manihot esculenta HOM05D007154 ORTHO05D008945 1.4e-33 147.5 126 58.7
Ca_23384_v3 Cicer arietinum L. HOM05D007154 ORTHO05D008945 1.8e-33 147.1 122 62.3
Lj3C844G3 Lonicera japonica HOM05D007154 ORTHO05D008945 1.8e-33 147.1 131 59.5
Nn3g18537 Nelumbo nucifera HOM05D007154 ORTHO05D008945 2.3e-33 146.7 145 54.5
VMungo0331G0746 Vigna mungo HOM05D007154 ORTHO05D008945 2.3e-33 146.7 142 52.1
Medtr8g020800 Medicago truncatula HOM05D007154 ORTHO05D008945 3.1e-33 146.4 118 60.2
CiPaw.16G000700 Carya illinoinensis HOM05D007154 ORTHO05D008945 4.0e-33 146.0 116 62.1
Eucgr.G02613 Eucalyptus grandis HOM05D007154 ORTHO05D008945 4.0e-33 146.0 127 60.6
Nitab4.5_0011708g0010 Nicotiana tabacum HOM05D007154 ORTHO05D008945 5.2e-33 145.6 120 60.8
TPR.G36620 Trifolium pratense HOM05D007154 ORTHO05D008945 5.2e-33 145.6 143 56.6
MELO3C005082.2 Cucumis melo HOM05D007154 ORTHO05D008945 6.8e-33 145.2 156 53.2
Nitab4.5_0007445g0030 Nicotiana tabacum HOM05D007154 ORTHO05D008945 6.8e-33 145.2 120 60.0
Nitab4.5_0002707g0010 Nicotiana tabacum HOM05D007154 ORTHO05D008945 8.9e-33 144.8 120 60.0
ClCG01G007940 Citrullus lanatus HOM05D007154 ORTHO05D008945 1.5e-32 144.1 156 50.6
Thhalv10005037m.g Eutrema salsugineum HOM05D007154 ORTHO05D008945 5.8e-32 142.1 124 56.5
PGR142G2984 Punica granatum HOM05D007154 ORTHO05D008945 5.8e-32 142.1 113 64.6
Sp2g23770 Schrenkiella parvula HOM05D007154 ORTHO05D008945 5.8e-32 142.1 117 60.7
PSO063G0981 Papaver somniferum HOM05D007154 ORTHO05D008945 7.6e-32 141.7 143 52.4
PSO782G0712 Papaver somniferum HOM05D007154 ORTHO05D008945 7.6e-32 141.7 143 52.4
vmacro16164 Vaccinium macrocarpon HOM05D007154 ORTHO05D008945 7.6e-32 141.7 115 59.1
Aa31LG11G2830 Aethionema arabicum HOM05D007154 ORTHO05D008945 1.3e-31 141.0 134 53.0
ECA240G2562 Erigeron canadensis HOM05D007154 ORTHO05D008945 1.7e-31 140.6 128 57.0
Psat4g220160 Pisum sativum HOM05D007154 ORTHO05D008945 2.2e-31 140.2 122 62.3
HanXRQChr13g0420721 Helianthus annuus HOM05D007154 ORTHO05D008945 3.8e-31 139.4 117 56.4
AT5G23395 Arabidopsis thaliana HOM05D007154 ORTHO05D008945 4.9e-31 139.0 123 55.3
Carub.0006s2118 Capsella rubella HOM05D007154 ORTHO05D008945 6.4e-31 138.7 121 56.2
Hund16199 Selenicereus undatus HOM05D007154 ORTHO05D008945 6.4e-31 138.7 139 50.4
ATR0124G040 Amborella trichopoda HOM05D007154 ORTHO05D008945 8.4e-31 138.3 146 50.7
Phvul.010G129500 Phaseolus vulgaris HOM05D007154 ORTHO05D008945 1.1e-30 137.9 144 52.8
CsaV3_5G021910 Cucumis sativus L. HOM05D007154 ORTHO05D008945 1.4e-30 137.5 156 50.6
Sc10g0006590 Simmondsia chinensis HOM05D007154 ORTHO05D008945 1.4e-30 137.5 132 52.3
Rhsim07G0213000 Rhododendron simsii HOM05D000003 ORTHO05D008945 1.9e-30 137.1 115 59.1
C07p44160 Brassica napus HOM05D007154 ORTHO05D008945 2.1e-29 133.7 124 52.4
BolC7t44940H Brassica oleracea HOM05D007154 ORTHO05D008945 2.1e-29 133.7 124 52.4
HPP92_003488 Vanilla planifolia HOM05D007154 ORTHO05D008945 2.1e-29 133.7 151 49.0
Os04g0527700 Oryza sativa ssp. japonica HOM05D007154 ORTHO05D008945 6.0e-29 132.1 113 57.5
unitig_61.g26453 Utricularia gibba HOM05D007154 ORTHO05D008945 6.0e-29 132.1 120 56.7
FvH4_4g37330 Fragaria vesca HOM05D007154 ORTHO05D008945 1.0e-28 131.3 105 60.0
A06p34370 Brassica napus HOM05D007154 ORTHO05D008945 1.7e-28 130.6 124 51.6
BraA06t26367Z Brassica rapa HOM05D007154 ORTHO05D008945 1.7e-28 130.6 124 51.6
HPP92_026886 Vanilla planifolia HOM05D007154 ORTHO05D008945 2.3e-28 130.2 104 60.6
BcaNung03727 Brassica carinata HOM05D007154 ORTHO05D008945 1.1e-27 127.9 104 58.7
Zm00001eb427080 Zea mays HOM05D007154 ORTHO05D008945 1.1e-27 127.9 149 48.3
Haze_17398 Corylus avellana HOM05D007154 ORTHO05D008945 5.6e-27 125.6 196 40.8
Glyma.16G008100 Glycine max HOM05D007154 ORTHO05D008945 5.6e-27 125.6 88 69.3
Zm00001eb076710 Zea mays HOM05D007154 ORTHO05D008945 1.6e-26 124.0 89 62.9
Cpa.g.sc221.16 Carica papaya HOM05D007154 ORTHO05D008945 8.1e-26 121.7 93 60.2
CARHR190110 Cardamine hirsuta HOM05D007154 ORTHO05D008945 1.1e-25 121.3 89 62.9
TAR371G0737 Trochodendron aralioides HOM05D007154 ORTHO05D008945 4.4e-24 115.9 109 53.2
SHI21164 Sapria himalayana HOM05D007154 ORTHO05D008945 2.2e-23 113.6 115 52.2
Oeu037446.1 Olea europaea HOM05D007154 ORTHO05D008945 1.4e-22 110.9 74 67.6
Duzib248G1404 Durio zibethinus HOM05D007154 ORTHO05D008945 5.4e-22 109.0 100 56.0
TAR627G0850 Trochodendron aralioides HOM05D007154 ORTHO05D008945 8.7e-20 101.7 100 51.0
Pp3c11_17450 Physcomitrium patens HOM05D007154 ORTHO05D008945 4.5e-16 89.4 89 51.7
TAR622G0969 Trochodendron aralioides HOM05D007154 ORTHO05D008945 4.5e-16 89.4 128 43.0
AagrBONN_evm.TU.Sc2ySwM_362.2201 Anthoceros agrestis HOM05D007154 ORTHO05D008945 1.1e-11 74.7 87 46.0
Cfa026739 Carpinus fangiana HOM05D007154 ORTHO05D008945 7.4e-11 72.0 69 40.6
Duzib051G0001 Durio zibethinus HOM05D007154 ORTHO05D008945 4.8e-10 69.3 85 47.1
Mapoly0093s0036 Marchantia polymorpha HOM05D007154 ORTHO05D008945 6.2e-10 68.9 95 40.0
MCO07G261 Micromonas commoda HOM05D007154 ORTHO05D008945 2.9e-07 60.1 105 34.3
SEGI_35140 Sequoiadendron giganteum HOM05D007154 ORTHO05D008945 7.1e-06 55.5 92 34.8


User provided reference genes

Program Settings