Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold166G38305 Striga asiatica HOM05D007009 ORTHO05D008451 7.1e-101 370.5 180 100.0
SalBow2G0075 Salvia bowleyana HOM05D007009 ORTHO05D008451 1.2e-47 193.7 170 61.2
MSTRG.7846 Avicennia marina HOM05D007009 ORTHO05D008451 9.4e-45 184.1 170 56.5
Migut.L01370 Erythranthe guttata HOM05D007009 ORTHO05D008451 9.4e-45 184.1 164 59.8
Cc11_g13910 Coffea canephora HOM05D007009 ORTHO05D008451 1.4e-35 153.7 134 56.0
Dinv31143 Davidia involucrata HOM05D007009 ORTHO05D008451 4.0e-35 152.1 136 57.4
TAR374G0768 Trochodendron aralioides HOM05D007009 ORTHO05D008451 1.5e-34 150.2 135 54.1
unitig_8.g2944 Utricularia gibba HOM05D007009 ORTHO05D008451 2.0e-34 149.8 162 50.6
CSS0013437 Camellia sinensis var. sinensis HOM05D007009 ORTHO05D008451 9.8e-34 147.5 175 48.6
Actinidia08196 Actinidia chinensis HOM05D007009 ORTHO05D008451 1.3e-33 147.1 136 57.4
Nitab4.5_0008607g0010 Nicotiana tabacum HOM05D007009 ORTHO05D008451 1.3e-33 147.1 137 56.2
Atru.chr11.1917 Acer truncatum HOM05D007009 ORTHO05D008451 2.2e-33 146.4 134 55.2
Nitab4.5_0001030g0090 Nicotiana tabacum HOM05D007009 ORTHO05D008451 4.8e-33 145.2 137 55.5
PGSC0003DMG401022631 Solanum tuberosum HOM05D007009 ORTHO05D008451 6.3e-33 144.8 147 51.7
Peaxi162Scf00828g00312 Petunia axillaris HOM05D007009 ORTHO05D008451 8.3e-33 144.4 176 50.0
Solyc05g006580.3 Solanum lycopersicum HOM05D007009 ORTHO05D008451 3.1e-32 142.5 141 52.5
Prupe.1G262900 Prunus persica HOM05D007009 ORTHO05D008451 4.1e-32 142.1 169 45.6
Sopen05g002530 Solanum pennellii HOM05D007009 ORTHO05D008451 4.1e-32 142.1 138 53.6
Ca_15204_v3 Cicer arietinum L. HOM05D007009 ORTHO05D008451 7.0e-32 141.4 168 47.6
COL.COLO4_36263 Corchorus olitorius HOM05D007009 ORTHO05D008451 1.2e-31 140.6 157 51.6
Hma1.2p1_0265F.1_g106360 Hydrangea macrophylla HOM05D007009 ORTHO05D008451 1.2e-31 140.6 173 45.1
Cfa009076 Carpinus fangiana HOM05D007009 ORTHO05D008451 1.6e-31 140.2 175 45.7
Nn4g22971 Nelumbo nucifera HOM05D007009 ORTHO05D008451 2.0e-31 139.8 132 52.3
PSO832G0198 Papaver somniferum HOM05D007009 ORTHO05D008451 2.7e-31 139.4 175 45.1
Medtr5g037120 Medicago truncatula HOM05D007009 ORTHO05D008451 3.5e-31 139.0 137 54.7
PSO591G0441 Papaver somniferum HOM05D007009 ORTHO05D008451 1.0e-30 137.5 169 46.2
Aqoxy3G03177 Aquilegia oxysepala HOM05D007009 ORTHO05D008451 1.3e-30 137.1 155 47.7
CsaV3_5G032050 Cucumis sativus L. HOM05D007009 ORTHO05D008451 1.3e-30 137.1 166 48.2
Sc11g0001470 Simmondsia chinensis HOM05D007009 ORTHO05D008451 1.3e-30 137.1 170 45.3
Lj6A798T55 Lonicera japonica HOM05D007009 ORTHO05D008451 2.3e-30 136.3 134 53.7
ClCG05G024860 Citrullus lanatus HOM05D007009 ORTHO05D008451 2.9e-30 136.0 169 47.9
CAN.G27.64 Capsicum annuum HOM05D007009 ORTHO05D008451 3.8e-30 135.6 137 52.6
Haze_12109 Corylus avellana HOM05D007009 ORTHO05D008451 6.5e-30 134.8 195 42.6
MELO3C012041.2 Cucumis melo HOM05D007009 ORTHO05D008451 6.5e-30 134.8 169 47.3
Ciclev10032750m.g Citrus clementina HOM05D007009 ORTHO05D008451 1.1e-29 134.0 173 46.8
Lalb_Chr05g0217381 Lupinus albus HOM05D007009 ORTHO05D008451 1.9e-29 133.3 171 46.2
TPR.G26720 Trifolium pratense HOM05D007009 ORTHO05D008451 1.9e-29 133.3 136 52.2
VMungo1215G0662 Vigna mungo HOM05D007009 ORTHO05D008451 1.9e-29 133.3 133 49.6
DCAR_026574 Daucus carota HOM05D007009 ORTHO05D008451 2.5e-29 132.9 135 52.6
Manes.01G193800 Manihot esculenta HOM05D007009 ORTHO05D008451 2.5e-29 132.9 163 42.3
TWI18G0515 Tripterygium wilfordii HOM05D007009 ORTHO05D008451 2.5e-29 132.9 172 45.9
Dinv24931 Davidia involucrata HOM05D000094 ORTHO05D002904 3.2e-29 132.5 136 52.9
Eucgr.B03385 Eucalyptus grandis HOM05D007009 ORTHO05D008451 3.2e-29 132.5 142 50.0
FAN17G0686 Fragaria x ananassa HOM05D007009 ORTHO05D008451 3.2e-29 132.5 134 50.7
FvH4_4g35380 Fragaria vesca HOM05D007009 ORTHO05D008451 4.2e-29 132.1 166 46.4
FAN07G0981 Fragaria x ananassa HOM05D007009 ORTHO05D008451 4.2e-29 132.1 134 50.7
FAN12G0678 Fragaria x ananassa HOM05D007009 ORTHO05D008451 4.2e-29 132.1 166 46.4
CiPaw.06G077800 Carya illinoinensis HOM05D007009 ORTHO05D008451 9.5e-29 131.0 136 47.8
Duzib268G1291 Durio zibethinus HOM05D007009 ORTHO05D008451 1.2e-28 130.6 133 52.6
GSVIVG01020129001 Vitis vinifera HOM05D007009 ORTHO05D008451 1.2e-28 130.6 136 50.0
RcHm_v2.0_Chr4g0444991 Rosa chinensis HOM05D007009 ORTHO05D008451 1.6e-28 130.2 137 51.1
Sabra10G0027300 Salix brachista HOM05D007009 ORTHO05D008451 1.6e-28 130.2 153 47.7
CiPaw.05G143700 Carya illinoinensis HOM05D007009 ORTHO05D008451 2.1e-28 129.8 139 48.2
Thecc.02G237500 Theobroma cacao HOM05D007009 ORTHO05D008451 2.1e-28 129.8 159 47.8
CANSAT01G1662 Cannabis sativa HOM05D007009 ORTHO05D008451 3.6e-28 129.0 136 47.8
Glyma.02G026000 Glycine max HOM05D007009 ORTHO05D008451 4.7e-28 128.6 136 48.5
Gohir.A05G320100 Gossypium hirsutum HOM05D007009 ORTHO05D008451 6.1e-28 128.3 162 47.5
Psat2g116400 Pisum sativum HOM05D007009 ORTHO05D008451 8.0e-28 127.9 136 50.7
arahy.Tifrunner.gnm1.ann1.IMS4B0 Arachis hypogaea HOM05D007009 ORTHO05D008451 1.0e-27 127.5 146 44.5
FAN22G1672 Fragaria x ananassa HOM05D007009 ORTHO05D008451 1.0e-27 127.5 134 50.0
Gohir.D05G322400 Gossypium hirsutum HOM05D007009 ORTHO05D008451 1.0e-27 127.5 162 46.9
Potri.010G039466 Populus trichocarpa HOM05D007009 ORTHO05D008451 1.0e-27 127.5 160 45.0
Sed0027578 Sechium edule HOM05D007009 ORTHO05D008451 1.0e-27 127.5 168 45.2
arahy.Tifrunner.gnm1.ann1.8B6YVA Arachis hypogaea HOM05D007009 ORTHO05D008451 1.4e-27 127.1 146 44.5
Gorai.009G346000 Gossypium raimondii HOM05D007009 ORTHO05D008451 1.4e-27 127.1 132 50.8
Duzib251G0800 Durio zibethinus HOM05D007009 ORTHO05D008451 3.0e-27 125.9 132 52.3
Glyma.01G038700 Glycine max HOM05D007009 ORTHO05D008451 4.0e-27 125.6 137 46.7
Lj2g0006218 Lotus japonicus HOM05D007009 ORTHO05D008451 5.2e-27 125.2 181 42.0
MD16G1083100 Malus domestica HOM05D007009 ORTHO05D008451 6.8e-27 124.8 167 43.1
PGR102G0074 Punica granatum HOM05D007009 ORTHO05D008451 8.8e-27 124.4 161 46.0
Hund25306 Selenicereus undatus HOM05D007009 ORTHO05D008451 1.2e-26 124.0 134 48.5
QL03p067658 Quercus lobata HOM05D007009 ORTHO05D008451 2.6e-26 122.9 175 45.1
THA.LOC104808792 Tarenaya hassleriana HOM05D007009 ORTHO05D008451 3.4e-26 122.5 162 42.0
Aa31LG4G10880 Aethionema arabicum HOM05D007009 ORTHO05D008451 4.4e-26 122.1 141 46.1
AUR62026539 Chenopodium quinoa HOM05D007009 ORTHO05D008451 4.4e-26 122.1 175 41.7
Ah.03g132140 Amaranthus hybridus HOM05D007009 ORTHO05D008451 5.7e-26 121.7 160 43.8
Carub.0002s1666 Capsella rubella HOM05D007009 ORTHO05D008451 1.7e-25 120.2 167 46.1
Potri.008G191700 Populus trichocarpa HOM05D007009 ORTHO05D008451 3.7e-25 119.0 134 48.5
Sp5g25090 Schrenkiella parvula HOM05D007009 ORTHO05D008451 3.7e-25 119.0 168 44.6
BolC6t39457H Brassica oleracea HOM05D007009 ORTHO05D008451 1.4e-24 117.1 174 40.8
C06p43850 Brassica napus HOM05D007009 ORTHO05D008451 1.8e-24 116.7 136 44.9
EL10Ac6g13085 Beta vulgaris HOM05D007009 ORTHO05D008451 2.4e-24 116.3 132 47.7
Thhalv10019139m.g Eutrema salsugineum HOM05D007009 ORTHO05D008451 2.4e-24 116.3 167 43.1
Rhsim12G0053000 Rhododendron simsii HOM05D007009 ORTHO05D008451 2.7e-23 112.8 147 44.9
AT1G69980 Arabidopsis thaliana HOM05D007009 ORTHO05D008451 5.9e-23 111.7 165 40.0
BcaC08g46448 Brassica carinata HOM05D007009 ORTHO05D008451 1.3e-22 110.5 174 39.1
AL2G29220 Arabidopsis lyrata HOM05D007009 ORTHO05D008451 1.9e-21 106.7 164 39.0
HanXRQChr08g0209091 Helianthus annuus HOM05D007009 ORTHO05D008451 3.3e-21 105.9 136 41.9
CARHR063080 Cardamine hirsuta HOM05D007009 ORTHO05D008451 4.3e-21 105.5 165 37.6
vmacro01210 Vaccinium macrocarpon HOM05D007009 ORTHO05D008451 1.2e-20 104.0 240 32.9
Zm00001eb104690 Zea mays HOM05D007009 ORTHO05D008451 4.7e-20 102.1 133 39.8
Os09g0560400 Oryza sativa ssp. japonica HOM05D007009 ORTHO05D008451 8.0e-20 101.3 133 40.6
BcaB03g14776 Brassica carinata HOM05D007009 ORTHO05D008451 1.0e-19 100.9 132 43.9
ECA233G5592 Erigeron canadensis HOM05D007009 ORTHO05D008451 1.2e-18 97.4 134 44.0
Lsat_1_v5_gn_8_161781 Lactuca sativa HOM05D007009 ORTHO05D008451 1.4e-16 90.5 132 37.9
Cpa.g.sc5.312 Carica papaya HOM05D007009 ORTHO05D008451 1.8e-16 90.1 104 50.0
MBI15_g31419_MAGBIO Magnolia biondii HOM05D007009 ORTHO05D008451 5.4e-16 88.6 110 46.4
A07p36430 Brassica napus HOM05D007009 ORTHO05D008451 7.8e-15 84.7 123 41.5
Phvul.002G078700 Phaseolus vulgaris HOM05D007009 ORTHO05D008451 1.1e-13 80.9 136 35.3
BolC8t48483H Brassica oleracea HOM05D007009 ORTHO05D008451 4.3e-13 79.0 86 50.0
Mapoly0049s0134 Marchantia polymorpha HOM05D007009 ORTHO05D008451 1.4e-11 73.9 127 33.9
CDE10G1217 Ceratophyllum demersum HOM05D007009 ORTHO05D008451 1.5e-10 70.5 110 40.0
AUR62039445 Chenopodium quinoa HOM05D007009 ORTHO05D008451 5.8e-10 68.6 99 39.4
CSS0007469 Camellia sinensis var. sinensis HOM05D007009 ORTHO05D008451 4.9e-09 65.5 76 50.0
Pp3c4_16120 Physcomitrium patens HOM05D007009 ORTHO05D008451 8.3e-09 64.7 126 34.1
BcaB03g14779 Brassica carinata HOM05D007009 ORTHO05D008451 1.6e-07 60.5 100 41.0


User provided reference genes

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