Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold165G38243 Striga asiatica HOM05D007397 ORTHO05D009336 3.2e-96 355.1 189 100.0
MSTRG.7898 Avicennia marina HOM05D007397 ORTHO05D009336 6.0e-66 254.6 189 74.1
Oeu044824.1 Olea europaea HOM05D007397 ORTHO05D009336 2.9e-60 235.7 193 67.4
Migut.L01413 Erythranthe guttata HOM05D007397 ORTHO05D009336 5.6e-56 221.5 175 70.3
Cc02_g08640 Coffea canephora HOM05D007397 ORTHO05D009336 4.7e-55 218.4 201 64.2
PGSC0003DMG400011470 Solanum tuberosum HOM05D007397 ORTHO05D009336 6.2e-55 218.0 198 65.2
SalBow2G2387 Salvia bowleyana HOM05D007397 ORTHO05D009336 4.0e-54 215.3 191 66.5
Sopen04g005370 Solanum pennellii HOM05D007397 ORTHO05D009336 2.9e-52 209.1 200 63.0
Actinidia38224 Actinidia chinensis HOM05D007397 ORTHO05D009336 3.2e-51 205.7 181 65.7
CSS0023256 Camellia sinensis var. sinensis HOM05D007397 ORTHO05D009336 5.4e-51 204.9 194 61.9
Cpa.g.sc1.304 Carica papaya HOM05D007397 ORTHO05D009336 7.1e-51 204.5 182 64.3
Solyc04g010190.1 Solanum lycopersicum HOM05D007397 ORTHO05D009336 7.1e-51 204.5 198 62.6
ClCG09G020320 Citrullus lanatus HOM05D007397 ORTHO05D009336 1.0e-49 200.7 180 64.4
Glyma.04G095200 Glycine max HOM05D007397 ORTHO05D009336 1.7e-49 199.9 185 58.4
MELO3C025487.2 Cucumis melo HOM05D007397 ORTHO05D009336 2.3e-49 199.5 188 61.7
GSVIVG01032626001 Vitis vinifera HOM05D007397 ORTHO05D009336 6.6e-49 198.0 201 59.2
CANSAT64G2695 Cannabis sativa HOM05D007397 ORTHO05D009336 1.5e-48 196.8 189 59.3
Haze_16973 Corylus avellana HOM05D007397 ORTHO05D009336 1.5e-48 196.8 201 57.7
Glyma.06G097000 Glycine max HOM05D007397 ORTHO05D009336 1.5e-48 196.8 172 62.8
Phvul.009G036400 Phaseolus vulgaris HOM05D007397 ORTHO05D009336 3.3e-48 195.7 179 60.9
Sabra08G0033900 Salix brachista HOM05D007397 ORTHO05D009336 4.3e-48 195.3 184 60.3
FAN03G3257 Fragaria x ananassa HOM05D007397 ORTHO05D009336 7.3e-48 194.5 195 59.5
TWI38G1005 Tripterygium wilfordii HOM05D007397 ORTHO05D009336 1.6e-47 193.4 192 62.0
CiPaw.01G279900 Carya illinoinensis HOM05D007397 ORTHO05D009336 2.1e-47 193.0 192 60.4
Ca_11323_v3 Cicer arietinum L. HOM05D007397 ORTHO05D009336 2.1e-47 193.0 192 57.8
Hma1.2p1_0348F.1_g131665 Hydrangea macrophylla HOM05D007397 ORTHO05D009336 2.8e-47 192.6 195 61.0
Hma1.2p1_0348F.1_g131670 Hydrangea macrophylla HOM05D007397 ORTHO05D009336 2.8e-47 192.6 195 61.0
Rhsim09G0155900 Rhododendron simsii HOM05D007397 ORTHO05D009336 2.8e-47 192.6 185 61.1
VMungo1309G1572 Vigna mungo HOM05D007397 ORTHO05D009336 6.2e-47 191.4 184 59.2
Lj1P929T40 Lonicera japonica HOM05D007397 ORTHO05D009336 1.1e-46 190.7 143 67.8
unitig_22.g6935 Utricularia gibba HOM05D007397 ORTHO05D009336 1.8e-46 189.9 191 59.7
Cfa001558 Carpinus fangiana HOM05D007397 ORTHO05D009336 3.1e-46 189.1 193 58.0
Aqoxy5G01687 Aquilegia oxysepala HOM05D007397 ORTHO05D009336 4.0e-46 188.7 189 59.8
MBI05_g32638_MAGBIO Magnolia biondii HOM05D007397 ORTHO05D009336 1.5e-45 186.8 153 61.4
Nn2g12828 Nelumbo nucifera HOM05D007397 ORTHO05D009336 2.0e-45 186.4 127 70.9
EL10Ac2g03499 Beta vulgaris HOM05D007397 ORTHO05D009336 2.6e-45 186.0 167 61.1
CARHR086880 Cardamine hirsuta HOM05D007397 ORTHO05D009336 7.6e-45 184.5 181 55.8
TAR320G0002 Trochodendron aralioides HOM05D007397 ORTHO05D009336 7.6e-45 184.5 192 55.7
FAN01G1406 Fragaria x ananassa HOM05D007397 ORTHO05D009336 2.2e-44 183.0 195 56.9
Lj5g0010768 Lotus japonicus HOM05D007397 ORTHO05D009336 2.2e-44 183.0 188 57.4
Medtr1g115740 Medicago truncatula HOM05D007397 ORTHO05D009336 2.2e-44 183.0 198 54.5
Carub.0003s1170 Capsella rubella HOM05D007397 ORTHO05D009336 2.9e-44 182.6 181 55.8
Lalb_Chr06g0164111 Lupinus albus HOM05D007397 ORTHO05D009336 4.9e-44 181.8 184 58.2
PGR142G1402 Punica granatum HOM05D007397 ORTHO05D009336 4.9e-44 181.8 192 57.3
CAN.G1557.1 Capsicum annuum HOM05D007397 ORTHO05D009336 6.4e-44 181.4 116 78.4
Thhalv10021616m.g Eutrema salsugineum HOM05D007397 ORTHO05D009336 6.4e-44 181.4 179 56.4
FAN01G1537 Fragaria x ananassa HOM05D007397 ORTHO05D009336 8.4e-44 181.0 195 56.4
Potri.010G213600 Populus trichocarpa HOM05D007397 ORTHO05D009336 8.4e-44 181.0 153 64.1
AT3G12345 Arabidopsis thaliana HOM05D007397 ORTHO05D009336 1.1e-43 180.6 146 60.3
Potri.008G047800 Populus trichocarpa HOM05D007397 ORTHO05D009336 1.4e-43 180.3 183 57.9
BraA05t22502Z Brassica rapa HOM05D007397 ORTHO05D009336 1.9e-43 179.9 180 54.4
CsaV3_5G026110 Cucumis sativus L. HOM05D007397 ORTHO05D009336 2.4e-43 179.5 185 57.3
HanXRQChr14g0460741 Helianthus annuus HOM05D007397 ORTHO05D009336 4.2e-43 178.7 128 69.5
AUR62042666 Chenopodium quinoa HOM05D007397 ORTHO05D009336 1.6e-42 176.8 177 57.1
AL3G23990 Arabidopsis lyrata HOM05D007397 ORTHO05D009336 2.1e-42 176.4 186 54.8
QL08p057549 Quercus lobata HOM05D007397 ORTHO05D009336 2.1e-42 176.4 199 53.8
Sc06g0001870 Simmondsia chinensis HOM05D007397 ORTHO05D009336 2.1e-42 176.4 161 62.7
Dinv25942 Davidia involucrata HOM05D007397 ORTHO05D009336 4.6e-42 175.3 174 64.9
Gohir.D10G218000 Gossypium hirsutum HOM05D007397 ORTHO05D009336 4.6e-42 175.3 195 54.4
Thecc.10G062300 Theobroma cacao HOM05D007397 ORTHO05D009336 6.0e-42 174.9 202 55.4
MD07G1184800 Malus domestica HOM05D007397 ORTHO05D009336 7.8e-42 174.5 187 54.5
C05p55480 Brassica napus HOM05D007397 ORTHO05D009336 1.0e-41 174.1 169 55.6
BolC5t34214H Brassica oleracea HOM05D007397 ORTHO05D009336 1.0e-41 174.1 169 55.6
Sp3g10540 Schrenkiella parvula HOM05D007397 ORTHO05D009336 1.0e-41 174.1 185 52.4
PSO384G5114 Papaver somniferum HOM05D007397 ORTHO05D009336 1.3e-41 173.7 128 67.2
Sed0011140 Sechium edule HOM05D007397 ORTHO05D009336 1.7e-41 173.3 191 55.0
A05p37050 Brassica napus HOM05D007397 ORTHO05D009336 2.3e-41 172.9 177 52.5
RcHm_v2.0_Chr1g0365021 Rosa chinensis HOM05D007397 ORTHO05D009336 3.0e-41 172.6 177 55.9
DCAR_015250 Daucus carota HOM05D007397 ORTHO05D009336 3.9e-41 172.2 130 66.2
TPR.G10388 Trifolium pratense HOM05D007397 ORTHO05D009336 3.9e-41 172.2 199 53.3
Psat6g239080 Pisum sativum HOM05D007397 ORTHO05D009336 8.7e-41 171.0 202 52.0
THA.LOC104809886 Tarenaya hassleriana HOM05D007397 ORTHO05D009336 8.7e-41 171.0 170 57.1
THA.LOC104827311 Tarenaya hassleriana HOM05D007397 ORTHO05D009336 1.5e-40 170.2 177 57.6
BcaC05g29269 Brassica carinata HOM05D007397 ORTHO05D009336 2.5e-40 169.5 169 56.2
Aa31sc153G60 Aethionema arabicum HOM05D007397 ORTHO05D009336 4.3e-40 168.7 184 55.4
Atru.chr12.591 Acer truncatum HOM05D007397 ORTHO05D009336 7.3e-40 167.9 205 52.2
Gorai.011G244600 Gossypium raimondii HOM05D007397 ORTHO05D009336 7.3e-40 167.9 195 52.8
Prupe.2G224700 Prunus persica HOM05D007397 ORTHO05D009336 9.6e-40 167.5 187 52.4
PSO339G5749 Papaver somniferum HOM05D007397 ORTHO05D009336 2.1e-39 166.4 128 64.8
ATR0681G332 Amborella trichopoda HOM05D007397 ORTHO05D009336 1.5e-37 160.2 186 50.5
BcaB04g21083 Brassica carinata HOM05D007397 ORTHO05D009336 1.5e-37 160.2 188 49.5
BcaB04g21085 Brassica carinata HOM05D007397 ORTHO05D009336 1.5e-37 160.2 188 49.5
CDE02G3908 Ceratophyllum demersum HOM05D001333 ORTHO05D001208 1.5e-37 160.2 161 52.2
Nitab4.5_0007221g0040 Nicotiana tabacum HOM05D007397 ORTHO05D009336 1.5e-37 160.2 198 51.5
Lsat_1_v5_gn_2_115220 Lactuca sativa HOM05D005234 ORTHO05D006583 2.6e-37 159.5 172 55.2
Gohir.A10G209700 Gossypium hirsutum HOM05D007397 ORTHO05D009336 3.4e-37 159.1 198 51.5
MBI05_g30757_MAGBIO Magnolia biondii HOM05D007397 ORTHO05D009336 5.8e-37 158.3 142 57.7
HPP92_025097 Vanilla planifolia HOM05D007397 ORTHO05D009336 8.4e-36 154.5 195 46.7
Manes.10G039600 Manihot esculenta HOM05D007397 ORTHO05D009336 2.1e-34 149.8 89 80.9
AUR62025539 Chenopodium quinoa HOM05D007397 ORTHO05D009336 3.5e-34 149.1 175 52.0
FAN10G1155 Fragaria x ananassa HOM05D007397 ORTHO05D009336 3.5e-34 149.1 184 51.1
Ciclev10034008m.g Citrus clementina HOM05D007397 ORTHO05D009336 5.1e-33 145.2 89 77.5
Duzib106G0993 Durio zibethinus HOM05D007397 ORTHO05D009336 1.9e-32 143.3 113 63.7
Mapoly0043s0078 Marchantia polymorpha HOM05D007397 ORTHO05D009336 2.5e-32 142.9 135 53.3
COL.COLO4_37769 Corchorus olitorius HOM05D007397 ORTHO05D009336 5.6e-32 141.7 194 46.9
SEGI_38306 Sequoiadendron giganteum HOM05D007397 ORTHO05D009336 1.3e-31 140.6 135 55.6
Peaxi162Scf00135g00025 Petunia axillaris HOM05D007397 ORTHO05D009336 1.2e-29 134.0 204 46.1
Nitab4.5_0006737g0020 Nicotiana tabacum HOM05D007397 ORTHO05D009336 2.9e-28 129.4 163 54.0
SMO229G0021 Selaginella moellendorffii HOM05D007397 ORTHO05D009336 3.5e-26 122.5 143 46.2
ECA238G2043 Erigeron canadensis HOM05D005234 ORTHO05D006583 1.3e-25 120.6 138 56.5
Os06g0484500 Oryza sativa ssp. japonica HOM05D007397 ORTHO05D009336 1.3e-25 120.6 162 44.4
Zm00001eb397310 Zea mays HOM05D007397 ORTHO05D009336 1.1e-24 117.5 161 46.6
Cfa009156 Carpinus fangiana HOM05D007397 ORTHO05D009336 2.3e-17 93.2 135 50.4
AagrBONN_evm.TU.Sc2ySwM_368.51 Anthoceros agrestis HOM05D007397 ORTHO05D009336 3.3e-16 89.4 106 42.5
C03p57580 Brassica napus HOM05D007397 ORTHO05D009336 2.8e-15 86.3 112 42.0
Duzib114G0919 Durio zibethinus HOM05D007397 ORTHO05D009336 2.8e-15 86.3 130 47.7
BcaC03g17725 Brassica carinata HOM05D007397 ORTHO05D009336 1.2e-13 80.9 108 41.7


User provided reference genes

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