Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold164G38120 Striga asiatica HOM05D005804 ORTHO05D006849 2.8e-285 984.6 479 100.0
SalBow8G2935 Salvia bowleyana HOM05D005804 ORTHO05D006849 2.2e-125 453.4 454 53.5
Oeu058729.2 Olea europaea HOM05D005804 ORTHO05D006849 5.8e-118 428.7 452 52.2
Migut.O00254 Erythranthe guttata HOM05D005804 ORTHO05D006849 3.8e-117 426.0 457 50.3
Cfa018793 Carpinus fangiana HOM05D005804 ORTHO05D006849 1.9e-113 413.7 451 46.6
Haze_07141 Corylus avellana HOM05D005804 ORTHO05D006849 1.3e-106 391.0 468 44.4
Rhsim12G0175100 Rhododendron simsii HOM05D005804 ORTHO05D006849 1.8e-106 390.6 467 45.2
GSVIVG01008547001 Vitis vinifera HOM05D005804 ORTHO05D006849 8.7e-106 388.3 464 47.2
Peaxi162Scf00171g00421 Petunia axillaris HOM05D005804 ORTHO05D006849 3.7e-104 382.9 446 46.6
CAN.G1631.5 Capsicum annuum HOM05D005606 ORTHO05D006446 1.1e-103 381.3 449 45.7
Nitab4.5_0010950g0010 Nicotiana tabacum HOM05D005804 ORTHO05D006849 9.0e-103 378.3 463 45.4
Cc04_g08810 Coffea canephora HOM05D005804 ORTHO05D006849 4.5e-102 375.9 451 48.6
Sopen03g029080 Solanum pennellii HOM05D005804 ORTHO05D006849 2.9e-101 373.2 450 43.6
Solyc03g098330.2 Solanum lycopersicum HOM05D005804 ORTHO05D006849 3.8e-101 372.9 460 43.3
PGSC0003DMG400025629 Solanum tuberosum HOM05D005804 ORTHO05D006849 5.0e-101 372.5 440 43.2
CiPaw.11G006800 Carya illinoinensis HOM05D005804 ORTHO05D006849 1.4e-100 370.9 457 44.6
Dinv23150 Davidia involucrata HOM05D005804 ORTHO05D006849 2.5e-100 370.2 449 47.7
Hma1.2p1_0014F.1_g009390 Hydrangea macrophylla HOM05D005804 ORTHO05D006849 6.1e-99 365.5 447 45.4
QL10p002869 Quercus lobata HOM05D005804 ORTHO05D006849 1.8e-98 364.0 450 42.7
MD14G1156600 Malus domestica HOM05D005804 ORTHO05D006849 4.3e-97 359.4 453 43.0
Aqoxy5G03360 Aquilegia oxysepala HOM05D005804 ORTHO05D006849 1.3e-96 357.8 453 44.2
Prupe.5G150700 Prunus persica HOM05D005804 ORTHO05D006849 2.2e-96 357.1 461 42.7
COL.COLO4_28132 Corchorus olitorius HOM05D005804 ORTHO05D006849 2.6e-94 350.1 458 43.2
HanXRQChr13g0408711 Helianthus annuus HOM05D005804 ORTHO05D006849 1.0e-93 348.2 438 44.5
TAR629G0711 Trochodendron aralioides HOM05D005804 ORTHO05D006849 1.7e-93 347.4 446 45.5
Thecc.03G129500 Theobroma cacao HOM05D005804 ORTHO05D006849 1.1e-92 344.7 458 41.3
Lalb_Chr11g0069551 Lupinus albus HOM05D005804 ORTHO05D006849 1.9e-92 344.0 463 40.4
Psat5g051400 Pisum sativum HOM05D005804 ORTHO05D006849 2.1e-91 340.5 465 41.7
TPR.G14211 Trifolium pratense HOM05D005804 ORTHO05D006849 4.7e-91 339.3 465 40.9
FAN08G1998 Fragaria x ananassa HOM05D005804 ORTHO05D006849 6.1e-91 339.0 452 43.8
DCAR_007491 Daucus carota HOM05D005804 ORTHO05D006849 1.1e-89 334.7 454 42.3
FAN13G2030 Fragaria x ananassa HOM05D005804 ORTHO05D006849 2.6e-89 333.6 448 43.8
Medtr3g099220 Medicago truncatula HOM05D005804 ORTHO05D006849 2.6e-89 333.6 446 42.8
PSO478G1623 Papaver somniferum HOM05D005804 ORTHO05D006849 2.6e-89 333.6 478 41.6
arahy.Tifrunner.gnm1.ann1.489AYV Arachis hypogaea HOM05D005804 ORTHO05D006849 4.4e-89 332.8 440 43.2
Medtr2g045240 Medicago truncatula HOM05D005804 ORTHO05D006849 4.4e-89 332.8 455 42.2
Medtr2g045245 Medicago truncatula HOM05D005804 ORTHO05D006849 4.4e-89 332.8 455 42.2
Lsat_1_v5_gn_1_33221 Lactuca sativa HOM05D005804 ORTHO05D006849 1.3e-88 331.3 452 42.0
TWI23G1188 Tripterygium wilfordii HOM05D005804 ORTHO05D006849 1.3e-88 331.3 460 41.1
FAN04G2797 Fragaria x ananassa HOM05D005804 ORTHO05D006849 8.2e-88 328.6 448 42.6
FvH4_5g08360 Fragaria vesca HOM05D005804 ORTHO05D006849 1.4e-87 327.8 456 43.2
Gorai.001G058800 Gossypium raimondii HOM05D005804 ORTHO05D006849 3.1e-87 326.6 460 41.5
Ca_16047_v3 Cicer arietinum L. HOM05D005804 ORTHO05D006849 4.1e-87 326.2 459 42.7
Lj1g0008882 Lotus japonicus HOM05D005804 ORTHO05D006849 5.3e-87 325.9 464 41.4
Duzib205G0351 Durio zibethinus HOM05D005804 ORTHO05D006849 1.2e-86 324.7 476 39.7
arahy.Tifrunner.gnm1.ann1.PR501J Arachis hypogaea HOM05D005804 ORTHO05D006849 1.6e-86 324.3 440 42.0
Cpa.g.sc13.112 Carica papaya HOM05D005804 ORTHO05D006849 2.0e-86 323.9 477 41.3
FAN18G4115 Fragaria x ananassa HOM05D005804 ORTHO05D006849 5.9e-86 322.4 442 43.0
arahy.Tifrunner.gnm1.ann1.Y2QIS7 Arachis hypogaea HOM05D005804 ORTHO05D006849 1.0e-85 321.6 442 42.5
arahy.Tifrunner.gnm1.ann1.I073XK Arachis hypogaea HOM05D005804 ORTHO05D006849 1.7e-85 320.9 439 42.4
Lj9A479T55 Lonicera japonica HOM05D005804 ORTHO05D006849 2.9e-85 320.1 418 45.0
Ciclev10031832m.g Citrus clementina HOM05D005804 ORTHO05D006849 1.6e-83 314.3 460 39.6
Atru.chr12.1219 Acer truncatum HOM05D005804 ORTHO05D006849 3.6e-83 313.2 461 39.3
THA.LOC104825017 Tarenaya hassleriana HOM05D005804 ORTHO05D006849 4.7e-83 312.8 458 38.6
CANSAT80G2783 Cannabis sativa HOM05D005804 ORTHO05D006849 1.4e-82 311.2 426 40.6
Sc22g0003840 Simmondsia chinensis HOM05D005804 ORTHO05D006849 1.4e-82 311.2 478 40.6
Hund02443 Selenicereus undatus HOM05D005804 ORTHO05D006849 1.8e-82 310.8 450 41.1
ClCG03G003790 Citrullus lanatus HOM05D005804 ORTHO05D006849 2.3e-82 310.5 462 39.6
TAR371G0929 Trochodendron aralioides HOM05D005804 ORTHO05D006849 2.0e-81 307.4 441 42.6
CsaV3_1G009670 Cucumis sativus L. HOM05D005804 ORTHO05D006849 1.7e-80 304.3 459 38.3
unitig_26.g9610 Utricularia gibba HOM05D005804 ORTHO05D006849 7.0e-79 298.9 450 41.8
VMungo1309G0122 Vigna mungo HOM05D005804 ORTHO05D006849 7.0e-79 298.9 448 37.9
MBI11_g05331_MAGBIO Magnolia biondii HOM05D005804 ORTHO05D006849 1.2e-78 298.1 449 39.6
Atru.chr6.1796 Acer truncatum HOM05D005804 ORTHO05D006849 1.0e-77 295.0 450 38.7
AL7G28300 Arabidopsis lyrata HOM05D005804 ORTHO05D006849 1.0e-77 295.0 452 38.3
AT4G24900 Arabidopsis thaliana HOM05D005804 ORTHO05D006849 1.7e-77 294.3 457 39.4
MD06G1141400 Malus domestica HOM05D005804 ORTHO05D006849 3.8e-77 293.1 411 40.4
Aa31LG7G10880 Aethionema arabicum HOM05D005804 ORTHO05D006849 1.6e-75 287.7 464 39.0
SGA_v2.0_scaffold110G31174 Striga asiatica HOM05D052586 ORTHO05D006849 2.7e-75 287.0 240 63.3
AUR62029607 Chenopodium quinoa HOM05D005804 ORTHO05D006849 4.0e-74 283.1 432 38.2
Sp7g22880 Schrenkiella parvula HOM05D005804 ORTHO05D006849 2.0e-73 280.8 446 39.2
EL10Ac5g11407 Beta vulgaris HOM05D005804 ORTHO05D006849 1.8e-71 274.2 530 34.5
MELO3C002363.2 Cucumis melo HOM05D005804 ORTHO05D006849 3.1e-71 273.5 459 36.8
Thhalv10025155m.g Eutrema salsugineum HOM05D005804 ORTHO05D006849 4.5e-70 269.6 445 37.5
Ah.02g114880 Amaranthus hybridus HOM05D005804 ORTHO05D006849 1.3e-69 268.1 462 36.6
SHI10578 Sapria himalayana HOM05D005804 ORTHO05D006849 1.5e-68 264.6 460 37.4
HPP92_013611 Vanilla planifolia HOM05D005804 ORTHO05D006849 2.1e-67 260.8 440 35.7
A01p16190 Brassica napus HOM05D005804 ORTHO05D006849 8.8e-66 255.4 476 34.7
BraA01t01555Z Brassica rapa HOM05D005804 ORTHO05D006849 3.4e-65 253.4 476 34.9
BcaC09g52237 Brassica carinata HOM05D005804 ORTHO05D006849 5.7e-65 252.7 474 35.9
BcaNung06008 Brassica carinata HOM05D005804 ORTHO05D006849 5.7e-65 252.7 473 35.7
Nitab4.5_0001180g0250 Nicotiana tabacum HOM05D005804 ORTHO05D006849 7.5e-65 252.3 353 42.2
BolC1t01947H Brassica oleracea HOM05D005804 ORTHO05D006849 1.7e-64 251.1 474 35.4
Glyma.06G170000 Glycine max HOM05D005804 ORTHO05D006849 2.8e-64 250.4 435 35.4
C01p20180 Brassica napus HOM05D005804 ORTHO05D006849 1.1e-63 248.4 476 35.3
Zm00001eb102430 Zea mays HOM05D005804 ORTHO05D006849 2.3e-61 240.7 454 35.0
CSS0001147 Camellia sinensis var. sinensis HOM05D005804 ORTHO05D006849 7.3e-60 235.7 204 51.5
Potri.012G098000 Populus trichocarpa HOM05D005804 ORTHO05D006849 8.0e-59 232.3 262 43.5
ECA247G1629 Erigeron canadensis HOM05D005804 ORTHO05D006849 1.3e-56 224.9 339 42.8
Actinidia08874 Actinidia chinensis HOM05D005804 ORTHO05D006849 4.9e-56 223.0 270 41.5
SEGI_29979 Sequoiadendron giganteum HOM05D005804 ORTHO05D006849 3.9e-53 213.4 457 31.7
RcHm_v2.0_Chr7g0190091 Rosa chinensis HOM05D005804 ORTHO05D006849 1.5e-52 211.5 220 47.7
Manes.14G051101 Manihot esculenta HOM05D005804 ORTHO05D006849 1.6e-51 208.0 213 45.1
Sed0001636 Sechium edule HOM05D005804 ORTHO05D006849 5.2e-50 203.0 464 31.7
Eucgr.K02724 Eucalyptus grandis HOM05D005804 ORTHO05D006849 1.6e-46 191.4 340 37.1
Gohir.A07G051132 Gossypium hirsutum HOM05D005804 ORTHO05D006849 7.3e-44 182.6 182 45.6
Gohir.D07G055532 Gossypium hirsutum HOM05D005804 ORTHO05D006849 1.1e-42 178.7 167 47.9
Os09g0506900 Oryza sativa ssp. japonica HOM05D005804 ORTHO05D006849 6.8e-42 176.0 223 42.6
AagrBONN_evm.TU.Sc2ySwM_362.247 Anthoceros agrestis HOM05D005804 ORTHO05D006849 5.8e-41 172.9 460 30.2
Dinv11177 Davidia involucrata HOM05D005804 ORTHO05D006849 5.8e-41 172.9 296 39.2
CDE05G3468 Ceratophyllum demersum HOM05D005804 ORTHO05D006849 1.9e-39 167.9 323 34.4
Carub.0007s1617 Capsella rubella HOM05D005804 ORTHO05D006849 5.4e-39 166.4 144 49.3
Phvul.009G166301 Phaseolus vulgaris HOM05D005804 ORTHO05D006849 5.4e-39 166.4 178 43.3
CSS0012660 Camellia sinensis var. sinensis HOM05D005804 ORTHO05D006849 1.7e-37 161.4 143 58.0
Pp3c6_21480 Physcomitrium patens HOM05D005804 ORTHO05D006849 3.0e-37 160.6 489 28.0
ATR0178G019 Amborella trichopoda HOM05D005804 ORTHO05D006849 1.5e-36 158.3 131 53.4
Lalb_Chr08g0237181 Lupinus albus HOM05D005804 ORTHO05D006849 1.5e-36 158.3 126 54.0
AUR62034829 Chenopodium quinoa HOM05D005804 ORTHO05D006849 3.3e-36 157.1 197 43.7
AUR62034830 Chenopodium quinoa HOM05D005804 ORTHO05D006849 3.3e-36 157.1 197 43.7
Oeu016044.4 Olea europaea HOM05D005804 ORTHO05D006849 1.2e-35 155.2 153 52.3
RcHm_v2.0_Chr7g0190081 Rosa chinensis HOM05D005804 ORTHO05D006849 2.8e-35 154.1 139 56.8
Manes.14G051001 Manihot esculenta HOM05D005804 ORTHO05D006849 1.8e-34 151.4 137 55.5
Gohir.A07G051066 Gossypium hirsutum HOM05D005804 ORTHO05D006849 2.3e-34 151.0 141 56.0
Gohir.D07G055466 Gossypium hirsutum HOM05D005804 ORTHO05D006849 5.2e-34 149.8 141 56.0
Lalb_Chr08g0237201 Lupinus albus HOM05D005804 ORTHO05D006849 5.2e-34 149.8 138 57.2
Medtr2g045235 Medicago truncatula HOM05D005804 ORTHO05D006849 3.4e-33 147.1 145 52.4
SMO133G0032 Selaginella moellendorffii HOM05D005804 ORTHO05D006849 2.2e-32 144.4 442 27.8
vmacro16720 Vaccinium macrocarpon HOM05D005804 ORTHO05D006849 6.4e-32 142.9 138 57.2
Carub.0007s1616 Capsella rubella HOM05D005804 ORTHO05D006849 3.5e-30 137.1 145 51.0
Dinv11175 Davidia involucrata HOM05D005804 ORTHO05D006849 1.1e-28 132.1 100 68.0
CARHR232300 Cardamine hirsuta HOM05D005804 ORTHO05D006849 1.5e-28 131.7 141 49.6
SalBow2G1912 Salvia bowleyana HOM05D000011 ORTHO05D000018 5.6e-28 129.8 128 50.8
vmacro16719 Vaccinium macrocarpon HOM05D005804 ORTHO05D006849 5.6e-28 129.8 134 48.5
SEGI_07598 Sequoiadendron giganteum HOM05D005804 ORTHO05D006849 3.1e-26 124.0 133 39.8
Mapoly0096s0044 Marchantia polymorpha HOM05D005804 ORTHO05D006849 5.2e-26 123.2 130 42.3
ATR0178G002 Amborella trichopoda HOM05D005804 ORTHO05D006849 3.2e-23 114.0 341 30.5
SEGI_03962 Sequoiadendron giganteum HOM05D005804 ORTHO05D006849 5.4e-23 113.2 360 29.2
Zm00001eb317740 Zea mays HOM05D005804 ORTHO05D006849 6.6e-21 106.3 116 52.6
Mapoly0096s0043 Marchantia polymorpha HOM05D005804 ORTHO05D006849 4.8e-19 100.1 139 46.0
CSS0025658 Camellia sinensis var. sinensis HOM05D005804 ORTHO05D006849 8.4e-16 89.4 131 42.0
Potri.015G096700 Populus trichocarpa HOM05D005804 ORTHO05D006849 9.3e-15 85.9 158 35.4
CBR_g12751 Chara braunii HOM05D005804 ORTHO05D006849 1.2e-14 85.5 170 34.1
CiPaw.12G043400 Carya illinoinensis HOM05D005804 ORTHO05D006849 1.2e-09 68.9 67 55.2


User provided reference genes

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