Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold163G38089 Striga asiatica HOM05D003689 ORTHO05D003950 2.6e-204 716.5 887 100.0
SGA_v2.0_scaffold163G38088 Striga asiatica HOM05D003689 ORTHO05D003950 2.6e-95 354.4 1105 66.8
MSTRG.14008 Avicennia marina HOM05D003689 ORTHO05D003950 2.9e-22 111.7 121 47.1
CSS0006196 Camellia sinensis var. sinensis HOM05D003689 ORTHO05D003950 5.9e-15 87.4 107 40.2
Gohir.D06G062000 Gossypium hirsutum HOM05D003689 ORTHO05D003950 5.9e-15 87.4 94 44.7
Gorai.010G072200 Gossypium raimondii HOM05D003689 ORTHO05D003950 5.9e-15 87.4 94 44.7
FAN15G3321 Fragaria x ananassa HOM05D003689 ORTHO05D003950 7.7e-15 87.0 370 35.4
PGSC0003DMG400014513 Solanum tuberosum HOM05D003689 ORTHO05D003950 7.7e-15 87.0 126 35.7
Peaxi162Scf00523g00624 Petunia axillaris HOM05D003689 ORTHO05D003950 1.0e-14 86.7 129 36.4
Solyc08g068230.4 Solanum lycopersicum HOM05D003689 ORTHO05D003950 1.3e-14 86.3 126 34.9
Sopen08g022090 Solanum pennellii HOM05D003689 ORTHO05D003950 2.2e-14 85.5 126 34.9
Nitab4.5_0000052g0100 Nicotiana tabacum HOM05D003689 ORTHO05D003950 6.5e-14 84.0 112 38.4
Cc00_g17700 Coffea canephora HOM05D003689 ORTHO05D003950 8.5e-14 83.6 113 40.7
Gohir.A06G063300 Gossypium hirsutum HOM05D003689 ORTHO05D003950 1.5e-13 82.8 93 44.1
ClCG06G008630 Citrullus lanatus HOM05D003689 ORTHO05D003950 1.9e-13 82.4 88 43.2
CAN.G797.4 Capsicum annuum HOM05D003689 ORTHO05D003950 3.2e-13 81.6 93 43.0
FvH4_2g36130 Fragaria vesca HOM05D003689 ORTHO05D003950 5.5e-13 80.9 117 40.2
FAN27G3406 Fragaria x ananassa HOM05D003689 ORTHO05D003950 5.5e-13 80.9 117 40.2
RcHm_v2.0_Chr6g0305741 Rosa chinensis HOM05D003689 ORTHO05D003950 5.5e-13 80.9 86 45.3
FvH4_1g04540 Fragaria vesca HOM05D003689 ORTHO05D003950 7.2e-13 80.5 76 50.0
Hma1.2p1_0140F.1_g063530 Hydrangea macrophylla HOM05D003689 ORTHO05D003950 7.2e-13 80.5 113 41.6
Nitab4.5_0003338g0050 Nicotiana tabacum HOM05D003689 ORTHO05D003950 7.2e-13 80.5 112 37.5
RcHm_v2.0_Chr2g0090251 Rosa chinensis HOM05D003689 ORTHO05D003950 7.2e-13 80.5 76 50.0
Sed0017853 Sechium edule HOM05D003689 ORTHO05D003950 9.4e-13 80.1 122 36.9
DCAR_004497 Daucus carota HOM05D003689 ORTHO05D003950 1.2e-12 79.7 105 38.1
FAN20G2410 Fragaria x ananassa HOM05D003689 ORTHO05D003950 1.2e-12 79.7 118 39.8
FAN28G1273 Fragaria x ananassa HOM05D003689 ORTHO05D003950 1.6e-12 79.3 76 48.7
MELO3C025352.2 Cucumis melo HOM05D003689 ORTHO05D003950 2.1e-12 79.0 73 46.6
FAN26G3272 Fragaria x ananassa HOM05D003689 ORTHO05D003950 2.1e-12 79.0 76 50.0
FAN23G2461 Fragaria x ananassa HOM05D003689 ORTHO05D003950 2.7e-12 78.6 76 48.7
CiPaw.07G207300 Carya illinoinensis HOM05D003689 ORTHO05D003950 3.6e-12 78.2 97 42.3
Ciclev10007776m.g Citrus clementina HOM05D003689 ORTHO05D003950 3.6e-12 78.2 74 47.3
COL.COLO4_34846 Corchorus olitorius HOM05D001279 ORTHO05D001636 3.6e-12 78.2 70 47.1
Phvul.010G165600 Phaseolus vulgaris HOM05D003689 ORTHO05D003950 3.6e-12 78.2 94 40.4
GSVIVG01015378001 Vitis vinifera HOM05D003689 ORTHO05D003950 3.6e-12 78.2 117 37.6
CsaV3_1G025520 Cucumis sativus L. HOM05D003689 ORTHO05D003950 4.7e-12 77.8 73 46.6
BcaC04g19516 Brassica carinata HOM05D000055 ORTHO05D000057 6.1e-12 77.4 104 38.5
Thhalv10012659m.g Eutrema salsugineum HOM05D000055 ORTHO05D003950 6.1e-12 77.4 104 38.5
Glyma.14G141800 Glycine max HOM05D003689 ORTHO05D003950 6.1e-12 77.4 121 32.2
Potri.018G081700 Populus trichocarpa HOM05D003689 ORTHO05D003950 6.1e-12 77.4 76 47.4
Sp6g23340 Schrenkiella parvula HOM05D000055 ORTHO05D003950 6.1e-12 77.4 79 44.3
C09p54880 Brassica napus HOM05D000055 ORTHO05D003950 8.0e-12 77.0 104 38.5
BolC9t58349H Brassica oleracea HOM05D000055 ORTHO05D003950 8.0e-12 77.0 104 38.5
Sabra18G0068800 Salix brachista HOM05D003689 ORTHO05D003950 8.0e-12 77.0 76 47.4
CARHR191690 Cardamine hirsuta HOM05D000055 ORTHO05D003950 1.0e-11 76.6 79 44.3
PSO210G3978 Papaver somniferum HOM05D003689 ORTHO05D003950 1.0e-11 76.6 120 34.2
Sc23g0005900 Simmondsia chinensis HOM05D003689 ORTHO05D003950 1.0e-11 76.6 110 37.3
AT5G21222 Arabidopsis thaliana HOM05D000055 ORTHO05D003950 1.4e-11 76.3 79 45.6
A10p18880 Brassica napus HOM05D000055 ORTHO05D003950 1.8e-11 75.9 79 44.3
BraA10t43967Z Brassica rapa HOM05D000055 ORTHO05D003950 1.8e-11 75.9 79 44.3
AL6G32800 Arabidopsis lyrata HOM05D000055 ORTHO05D003950 2.3e-11 75.5 79 44.3
Carub.0006s1949 Capsella rubella HOM05D000055 ORTHO05D003950 2.3e-11 75.5 79 44.3
Migut.J01154 Erythranthe guttata HOM05D003689 ORTHO05D003950 2.3e-11 75.5 74 41.9
PSO210G7239 Papaver somniferum HOM05D003689 ORTHO05D003950 2.3e-11 75.5 65 49.2
arahy.Tifrunner.gnm1.ann1.WWE821 Arachis hypogaea HOM05D003689 ORTHO05D003950 3.0e-11 75.1 117 31.6
MD08G1118600 Malus domestica HOM05D003689 ORTHO05D003950 3.0e-11 75.1 94 38.3
QL12p026389 Quercus lobata HOM05D003689 ORTHO05D003950 3.0e-11 75.1 94 37.2
Glyma.08G038200 Glycine max HOM05D003689 ORTHO05D003950 4.0e-11 74.7 98 40.8
Gohir.D08G272300 Gossypium hirsutum HOM05D003689 ORTHO05D003950 4.0e-11 74.7 74 43.2
Gorai.004G290700 Gossypium raimondii HOM05D003689 ORTHO05D003950 4.0e-11 74.7 74 43.2
Potri.018G037200 Populus trichocarpa HOM05D003689 ORTHO05D003950 4.0e-11 74.7 90 37.8
Thecc.09G108800 Theobroma cacao HOM05D003689 ORTHO05D003950 4.0e-11 74.7 104 42.3
Lalb_Chr05g0222931 Lupinus albus HOM05D003689 ORTHO05D003950 5.2e-11 74.3 119 35.3
arahy.Tifrunner.gnm1.ann1.3U27PV Arachis hypogaea HOM05D003689 ORTHO05D003950 6.8e-11 73.9 62 50.0
arahy.Tifrunner.gnm1.ann1.SBHH31 Arachis hypogaea HOM05D003689 ORTHO05D003950 6.8e-11 73.9 62 50.0
Lj4g0026082 Lotus japonicus HOM05D003689 ORTHO05D003950 6.8e-11 73.9 74 48.6
TAR624G0802 Trochodendron aralioides HOM05D003689 ORTHO05D003950 6.8e-11 73.9 123 35.8
Haze_21848 Corylus avellana HOM05D003689 ORTHO05D003950 8.8e-11 73.6 121 36.4
arahy.Tifrunner.gnm1.ann1.EDC6ME Arachis hypogaea HOM05D003689 ORTHO05D003950 1.2e-10 73.2 62 50.0
arahy.Tifrunner.gnm1.ann1.K2CPZ4 Arachis hypogaea HOM05D003689 ORTHO05D003950 1.2e-10 73.2 62 50.0
ClCG11G014000 Citrullus lanatus HOM05D008234 ORTHO05D010422 1.2e-10 73.2 118 36.4
Ciclev10007728m.g Citrus clementina HOM05D003689 ORTHO05D003950 1.2e-10 73.2 64 48.4
Lalb_Chr16g0388171 Lupinus albus HOM05D003689 ORTHO05D003950 1.2e-10 73.2 79 43.0
VMungo0331G0581 Vigna mungo HOM05D003689 ORTHO05D003950 1.2e-10 73.2 68 48.5
GSVIVG01035672001 Vitis vinifera HOM05D003689 ORTHO05D003950 1.2e-10 73.2 90 36.7
arahy.Tifrunner.gnm1.ann1.6C9669 Arachis hypogaea HOM05D003689 ORTHO05D003950 1.5e-10 72.8 117 30.8
Gohir.A08G250800 Gossypium hirsutum HOM05D003689 ORTHO05D003950 1.5e-10 72.8 111 35.1
AUR62009331 Chenopodium quinoa HOM05D003689 ORTHO05D003950 2.0e-10 72.4 85 37.6
AUR62023017 Chenopodium quinoa HOM05D003689 ORTHO05D003950 2.0e-10 72.4 85 37.6
Prupe.1G452700 Prunus persica HOM05D003689 ORTHO05D003950 2.0e-10 72.4 74 37.8
Cfa013343 Carpinus fangiana HOM05D003689 ORTHO05D003950 2.6e-10 72.0 84 42.9
THA.LOC104811116 Tarenaya hassleriana HOM05D003689 ORTHO05D003950 2.6e-10 72.0 66 45.5
CSS0016195 Camellia sinensis var. sinensis HOM05D003689 ORTHO05D003950 4.4e-10 71.2 74 43.2
MELO3C003585.2 Cucumis melo HOM05D003689 ORTHO05D003950 4.4e-10 71.2 125 33.6
Eucgr.C03818 Eucalyptus grandis HOM05D003689 ORTHO05D003950 4.4e-10 71.2 74 40.5
QL02p044325 Quercus lobata HOM05D003689 ORTHO05D003950 4.4e-10 71.2 73 46.6
Glyma.05G230700 Glycine max HOM05D003689 ORTHO05D003950 5.7e-10 70.9 102 37.3
Thecc.09G039700 Theobroma cacao HOM05D003689 ORTHO05D003950 5.7e-10 70.9 76 39.5
QL02p045402 Quercus lobata HOM05D003689 ORTHO05D003950 7.5e-10 70.5 66 48.5
EL10Ac2g04074 Beta vulgaris HOM05D003689 ORTHO05D003950 1.3e-09 69.7 104 35.6
Duzib150G1680 Durio zibethinus HOM05D003689 ORTHO05D003950 1.3e-09 69.7 76 43.4
Lalb_Chr14g0371561 Lupinus albus HOM05D003689 ORTHO05D003950 1.3e-09 69.7 81 43.2
Aa31LG1G13560 Aethionema arabicum HOM05D000055 ORTHO05D003950 1.7e-09 69.3 72 40.3
CDE02G3880 Ceratophyllum demersum HOM05D003689 ORTHO05D003950 1.7e-09 69.3 79 38.0
Actinidia31220 Actinidia chinensis HOM05D003689 ORTHO05D003950 2.2e-09 68.9 107 34.6
Ah.16g105250 Amaranthus hybridus HOM05D003689 ORTHO05D003950 2.2e-09 68.9 95 32.6
Cc06_g09790 Coffea canephora HOM05D003689 ORTHO05D003950 2.8e-09 68.6 74 41.9
Lalb_Chr14g0362401 Lupinus albus HOM05D003689 ORTHO05D003950 2.8e-09 68.6 89 38.2
MD15G1183500 Malus domestica HOM05D003689 ORTHO05D003950 2.8e-09 68.6 76 43.4
Sp2g21900 Schrenkiella parvula HOM05D003689 ORTHO05D003950 2.8e-09 68.6 82 36.6
TWI63G0545 Tripterygium wilfordii HOM05D003689 ORTHO05D003950 2.8e-09 68.6 94 39.4
Cfa003251 Carpinus fangiana HOM05D003689 ORTHO05D003950 3.7e-09 68.2 85 40.0
Sabra18G0038000 Salix brachista HOM05D003689 ORTHO05D003950 3.7e-09 68.2 68 44.1
vmacro20709 Vaccinium macrocarpon HOM05D003689 ORTHO05D003950 3.7e-09 68.2 202 67.3
BcaB06g28622 Brassica carinata HOM05D000888 ORTHO05D000740 4.8e-09 67.8 74 39.2
Haze_25759 Corylus avellana HOM05D003689 ORTHO05D003950 4.8e-09 67.8 66 42.4
Dinv41614 Davidia involucrata HOM05D003689 ORTHO05D003950 4.8e-09 67.8 66 43.9
Medtr1g008310 Medicago truncatula HOM05D003689 ORTHO05D003950 4.8e-09 67.8 79 44.3
AL6G37510 Arabidopsis lyrata HOM05D003689 ORTHO05D003950 6.3e-09 67.4 80 35.0
Ca_12812_v3 Cicer arietinum L. HOM05D003689 ORTHO05D003950 6.3e-09 67.4 79 40.5
Sc18g0001340 Simmondsia chinensis HOM05D003689 ORTHO05D003950 6.3e-09 67.4 71 40.8
CDE04G3773 Ceratophyllum demersum HOM05D003689 ORTHO05D003950 8.3e-09 67.0 79 38.0
Prupe.7G232600 Prunus persica HOM05D003689 ORTHO05D003950 8.3e-09 67.0 68 47.1
Aqoxy7G03846 Aquilegia oxysepala HOM05D003689 ORTHO05D003950 1.1e-08 66.6 90 35.6
THA.LOC104799204 Tarenaya hassleriana HOM05D003689 ORTHO05D003950 1.1e-08 66.6 78 38.5
BcaB04g19771 Brassica carinata HOM05D003689 ORTHO05D003950 1.4e-08 66.2 74 37.8
Hma1.2p1_3266F.1_g334670 Hydrangea macrophylla HOM05D003689 ORTHO05D003950 1.4e-08 66.2 91 38.5
ATR0315G024 Amborella trichopoda HOM05D003689 ORTHO05D003950 1.8e-08 65.9 62 45.2
MSTRG.6008 Avicennia marina HOM05D003689 ORTHO05D003950 1.8e-08 65.9 57 47.4
BcaC04g23586 Brassica carinata HOM05D003689 ORTHO05D003950 1.8e-08 65.9 74 37.8
A09p06120 Brassica napus HOM05D003689 ORTHO05D003950 1.8e-08 65.9 74 37.8
C09p06740 Brassica napus HOM05D003689 ORTHO05D003950 1.8e-08 65.9 74 37.8
BolC9t53595H Brassica oleracea HOM05D003689 ORTHO05D003950 1.8e-08 65.9 74 37.8
BraA09t36253Z Brassica rapa HOM05D003689 ORTHO05D003950 1.8e-08 65.9 74 37.8
CAN.G238.2 Capsicum annuum HOM05D003689 ORTHO05D003950 1.8e-08 65.9 114 32.5
Zm00001eb315460 Zea mays HOM05D003689 ORTHO05D003950 1.8e-08 65.9 80 37.5
Carub.0006s2350 Capsella rubella HOM05D003689 ORTHO05D003950 2.4e-08 65.5 74 36.5
Hma1.2p1_1151F.1_g262016 Hydrangea macrophylla HOM05D003689 ORTHO05D003950 2.4e-08 65.5 68 44.1
Peaxi162Scf00231g00023 Petunia axillaris HOM05D003689 ORTHO05D003950 2.4e-08 65.5 68 42.6
Solyc07g032380.4 Solanum lycopersicum HOM05D003689 ORTHO05D003950 2.4e-08 65.5 75 45.3
Sopen07g016320 Solanum pennellii HOM05D003689 ORTHO05D003950 2.4e-08 65.5 75 45.3
CANSAT56G1603 Cannabis sativa HOM05D003689 ORTHO05D003950 3.1e-08 65.1 81 40.7
CANSAT56G4471 Cannabis sativa HOM05D003689 ORTHO05D003950 3.1e-08 65.1 81 40.7
MBI04_g29969_MAGBIO Magnolia biondii HOM05D003689 ORTHO05D003950 3.1e-08 65.1 115 34.8
PGSC0003DMG400024327 Solanum tuberosum HOM05D003689 ORTHO05D003950 4.1e-08 64.7 180 66.7
Manes.16G066100 Manihot esculenta HOM05D003689 ORTHO05D003950 5.4e-08 64.3 62 45.2
PGR102G1523 Punica granatum HOM05D003689 ORTHO05D003950 5.4e-08 64.3 51 52.9
CARHR187690 Cardamine hirsuta HOM05D003689 ORTHO05D003950 7.0e-08 63.9 78 37.2
Lj7A652T76 Lonicera japonica HOM05D003689 ORTHO05D003950 7.0e-08 63.9 62 46.8
Hund09215 Selenicereus undatus HOM05D003689 ORTHO05D003950 7.0e-08 63.9 72 41.7
Manes.03G021600 Manihot esculenta HOM05D003689 ORTHO05D003950 9.1e-08 63.5 54 46.3
Medtr8g103480 Medicago truncatula HOM05D003689 ORTHO05D003950 9.1e-08 63.5 48 56.2
Thhalv10003915m.g Eutrema salsugineum HOM05D003689 ORTHO05D003950 1.2e-07 63.2 77 33.8
Psat0s586g0040 Pisum sativum HOM05D003689 ORTHO05D003950 1.6e-07 62.8 68 44.1
TAR383G0867 Trochodendron aralioides HOM05D006226 ORTHO05D007738 1.6e-07 62.8 58 48.3
Cpa.g.sc78.82 Carica papaya HOM05D003689 ORTHO05D003950 2.0e-07 62.4 55 50.9
Atru.chr7.2161 Acer truncatum HOM05D003689 ORTHO05D003950 2.7e-07 62.0 62 43.5
Lj8A603G55 Lonicera japonica HOM05D003689 ORTHO05D003950 3.5e-07 61.6 100 33.0
Sed0002455 Sechium edule HOM05D003689 ORTHO05D003950 3.5e-07 61.6 76 42.1
TWI34G0694 Tripterygium wilfordii HOM05D003689 ORTHO05D003950 3.5e-07 61.6 52 53.8
Migut.E01508 Erythranthe guttata HOM05D003689 ORTHO05D003950 4.5e-07 61.2 49 57.1
Ah.14g082150 Amaranthus hybridus HOM05D003689 ORTHO05D003950 5.9e-07 60.8 51 49.0
AUR62010979 Chenopodium quinoa HOM05D003689 ORTHO05D003950 5.9e-07 60.8 51 52.9
ECA234G0433 Erigeron canadensis HOM05D003689 ORTHO05D003950 5.9e-07 60.8 48 54.2
Lsat_1_v5_gn_8_95421 Lactuca sativa HOM05D003689 ORTHO05D003950 7.7e-07 60.5 59 47.5
SEGI_12691 Sequoiadendron giganteum HOM05D003689 ORTHO05D003950 7.7e-07 60.5 78 37.2
AUR62021489 Chenopodium quinoa HOM05D003689 ORTHO05D003950 1.3e-06 59.7 51 51.0
Nitab4.5_0000114g0090 Nicotiana tabacum HOM05D003689 ORTHO05D003950 1.3e-06 59.7 68 41.2
Nitab4.5_0004562g0020 Nicotiana tabacum HOM05D003689 ORTHO05D003950 1.3e-06 59.7 68 41.2
Duzib187G1779 Durio zibethinus HOM05D003689 ORTHO05D003950 2.9e-06 58.5 53 45.3
MD15G1097900 Malus domestica HOM05D003689 ORTHO05D003950 3.8e-06 58.2 49 55.1
EL10Ac8g18473 Beta vulgaris HOM05D003689 ORTHO05D003950 5.0e-06 57.8 51 49.0
Os01g0228400 Oryza sativa ssp. japonica HOM05D003689 ORTHO05D003950 5.0e-06 57.8 75 29.3
EL10Ac8g18479 Beta vulgaris HOM05D003689 ORTHO05D003950 6.5e-06 57.4 51 51.0
Rhsim01G0097100 Rhododendron simsii HOM05D003689 ORTHO05D003950 6.5e-06 57.4 218 61.0
Actinidia32678 Actinidia chinensis HOM05D003689 ORTHO05D003950 8.5e-06 57.0 66 34.8
Nn8g39148 Nelumbo nucifera HOM05D003689 ORTHO05D003950 8.5e-06 57.0 42 59.5


User provided reference genes

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