Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold163G38070 Striga asiatica HOM05D007429 ORTHO05D003505 7.0e-66 253.8 131 100.0
Oeu030718.1 Olea europaea HOM05D007429 ORTHO05D003505 3.9e-24 115.2 131 54.2
Migut.E01531 Erythranthe guttata HOM05D007429 ORTHO05D003505 9.6e-23 110.5 131 51.9
Sopen08g020350 Solanum pennellii HOM05D007429 ORTHO05D003505 1.5e-20 103.2 131 50.4
PGSC0003DMG402029142 Solanum tuberosum HOM05D007429 ORTHO05D003505 3.4e-20 102.1 131 50.4
Solyc08g066520.3 Solanum lycopersicum HOM05D007429 ORTHO05D003505 1.7e-19 99.8 129 48.8
TWI34G0747 Tripterygium wilfordii HOM05D007429 ORTHO05D003505 2.2e-19 99.4 131 51.1
CiPaw.08G026200 Carya illinoinensis HOM05D007429 ORTHO05D003505 6.5e-19 97.8 131 49.6
CSS0002972 Camellia sinensis var. sinensis HOM05D007429 ORTHO05D003505 1.9e-18 96.3 131 48.9
Dinv23374 Davidia involucrata HOM05D007429 ORTHO05D003505 7.1e-18 94.4 131 48.9
THA.LOC104811265 Tarenaya hassleriana HOM05D007429 ORTHO05D003505 7.1e-18 94.4 131 48.9
EL10Ac2g04004 Beta vulgaris HOM05D007429 ORTHO05D003505 9.3e-18 94.0 132 50.8
Sabra06G0186000 Salix brachista HOM05D007429 ORTHO05D003505 9.3e-18 94.0 131 48.1
Potri.006G237800 Populus trichocarpa HOM05D007429 ORTHO05D003505 2.7e-17 92.4 131 47.3
Actinidia13337 Actinidia chinensis HOM05D007429 ORTHO05D003505 4.6e-17 91.7 131 48.9
CSS0037511 Camellia sinensis var. sinensis HOM05D007429 ORTHO05D003505 4.6e-17 91.7 132 50.8
AUR62009266 Chenopodium quinoa HOM05D007429 ORTHO05D003505 6.0e-17 91.3 132 47.0
AUR62042440 Chenopodium quinoa HOM05D007429 ORTHO05D003505 6.0e-17 91.3 132 47.0
Sp6g31990 Schrenkiella parvula HOM05D007429 ORTHO05D003505 6.0e-17 91.3 131 45.8
Thecc.09G045900 Theobroma cacao HOM05D007429 ORTHO05D003505 6.0e-17 91.3 133 47.4
Atru.chr7.2081 Acer truncatum HOM05D007429 ORTHO05D003505 1.0e-16 90.5 131 48.9
Actinidia14679 Actinidia chinensis HOM05D007429 ORTHO05D003505 1.3e-16 90.1 131 45.8
Eucgr.C00555 Eucalyptus grandis HOM05D007429 ORTHO05D003505 2.3e-16 89.4 131 44.3
Eucgr.C00601 Eucalyptus grandis HOM05D007429 ORTHO05D003505 2.3e-16 89.4 131 44.3
Cfa013372 Carpinus fangiana HOM05D007429 ORTHO05D003505 3.0e-16 89.0 131 47.3
AL6G22340 Arabidopsis lyrata HOM05D007429 ORTHO05D003505 3.9e-16 88.6 131 44.3
Manes.16G075000 Manihot esculenta HOM05D007429 ORTHO05D003505 5.1e-16 88.2 131 45.8
Carub.0006s1011 Capsella rubella HOM05D007429 ORTHO05D003505 6.7e-16 87.8 131 44.3
MELO3C003465.2 Cucumis melo HOM05D007429 ORTHO05D003505 6.7e-16 87.8 131 45.8
AT5G11630 Arabidopsis thaliana HOM05D007429 ORTHO05D003505 8.7e-16 87.4 131 43.5
CsaV3_3G048540 Cucumis sativus L. HOM05D007429 ORTHO05D003505 8.7e-16 87.4 131 45.8
C09p65190 Brassica napus HOM05D007429 ORTHO05D003505 1.1e-15 87.0 131 43.5
Gorai.009G049400 Gossypium raimondii HOM05D007429 ORTHO05D003505 1.1e-15 87.0 133 45.9
Duzib187G1405 Durio zibethinus HOM05D007429 ORTHO05D003505 1.5e-15 86.7 133 44.4
Hund19504 Selenicereus undatus HOM05D007429 ORTHO05D003505 1.5e-15 86.7 134 47.0
arahy.Tifrunner.gnm1.ann1.ZH3G1A Arachis hypogaea HOM05D007429 ORTHO05D003505 2.5e-15 85.9 131 45.8
Dinv27908 Davidia involucrata HOM05D007429 ORTHO05D003505 2.5e-15 85.9 131 48.1
MD08G1113300 Malus domestica HOM05D007429 ORTHO05D003505 2.5e-15 85.9 131 47.3
A10p26140 Brassica napus HOM05D007429 ORTHO05D003505 3.3e-15 85.5 131 43.5
BraA10t44673Z Brassica rapa HOM05D007429 ORTHO05D003505 3.3e-15 85.5 131 43.5
DCAR_000754 Daucus carota HOM05D002792 ORTHO05D003039 3.3e-15 85.5 53 81.1
Glyma.06G086300 Glycine max HOM05D007429 ORTHO05D003505 3.3e-15 85.5 131 45.8
MD15G1092600 Malus domestica HOM05D007429 ORTHO05D003505 3.3e-15 85.5 131 45.8
Aa31LG3G15560 Aethionema arabicum HOM05D007429 ORTHO05D003505 4.3e-15 85.1 131 44.3
BcaB08g37037 Brassica carinata HOM05D007429 ORTHO05D003505 5.7e-15 84.7 131 43.5
BcaC03g13383 Brassica carinata HOM05D007429 ORTHO05D003505 7.4e-15 84.3 131 42.0
A02p01120 Brassica napus HOM05D007429 ORTHO05D003505 7.4e-15 84.3 131 42.0
C02p05300 Brassica napus HOM05D007429 ORTHO05D003505 7.4e-15 84.3 131 42.0
BolC2t06478H Brassica oleracea HOM05D007429 ORTHO05D003505 7.4e-15 84.3 131 42.0
BraA02t05091Z Brassica rapa HOM05D007429 ORTHO05D003505 7.4e-15 84.3 131 42.0
BcaC04g19209 Brassica carinata HOM05D007429 ORTHO05D003505 9.6e-15 84.0 131 42.7
BolC9t59348H Brassica oleracea HOM05D007429 ORTHO05D003505 9.6e-15 84.0 131 42.7
RcHm_v2.0_Chr6g0306421 Rosa chinensis HOM05D007429 ORTHO05D003505 9.6e-15 84.0 131 45.8
Lj1g0025254 Lotus japonicus HOM05D007429 ORTHO05D003505 1.3e-14 83.6 131 43.5
TPR.G15111 Trifolium pratense HOM05D007429 ORTHO05D003505 1.3e-14 83.6 131 43.5
ClCG11G015140 Citrullus lanatus HOM05D007429 ORTHO05D003505 2.1e-14 82.8 131 44.3
Gohir.D08G270600 Gossypium hirsutum HOM05D007429 ORTHO05D003505 4.8e-14 81.6 131 45.0
Cc08_g09700 Coffea canephora HOM05D007429 ORTHO05D003505 8.2e-14 80.9 127 46.5
Phvul.009G110300 Phaseolus vulgaris HOM05D007429 ORTHO05D003505 1.4e-13 80.1 131 42.7
CARHR187590 Cardamine hirsuta HOM05D007429 ORTHO05D003505 2.4e-13 79.3 131 42.7
Medtr3g109720 Medicago truncatula HOM05D007429 ORTHO05D003505 3.1e-13 79.0 131 42.7
arahy.Tifrunner.gnm1.ann1.R0MHDP Arachis hypogaea HOM05D007429 ORTHO05D003505 4.1e-13 78.6 129 43.4
Sc09g0009340 Simmondsia chinensis HOM05D007429 ORTHO05D003505 4.1e-13 78.6 131 43.5
FAN27G3027 Fragaria x ananassa HOM05D007429 ORTHO05D003505 5.3e-13 78.2 133 45.1
Glyma.04G084800 Glycine max HOM05D007429 ORTHO05D003505 6.9e-13 77.8 131 43.5
Lsat_1_v5_gn_6_22640 Lactuca sativa HOM05D007429 ORTHO05D003505 6.9e-13 77.8 131 43.5
Lalb_Chr08g0243031 Lupinus albus HOM05D007429 ORTHO05D003505 6.9e-13 77.8 52 73.1
Cfa013373 Carpinus fangiana HOM05D007429 ORTHO05D003505 1.2e-12 77.0 52 76.9
HanXRQChr02g0050601 Helianthus annuus HOM05D007429 ORTHO05D003505 3.4e-12 75.5 131 44.3
Thhalv10005203m.g Eutrema salsugineum HOM05D007429 ORTHO05D003505 4.5e-12 75.1 131 44.3
CiPaw.07G203700 Carya illinoinensis HOM05D007429 ORTHO05D003505 5.9e-12 74.7 120 43.3
TWI63G1379 Tripterygium wilfordii HOM05D007429 ORTHO05D003505 7.6e-12 74.3 120 47.5
Sabra06G0186100 Salix brachista HOM05D008609 ORTHO05D010987 1.0e-11 73.9 122 43.4
VMungo1309G0862 Vigna mungo HOM05D007429 ORTHO05D003505 1.0e-11 73.9 47 78.7
Ca_15587_v3 Cicer arietinum L. HOM05D002792 ORTHO05D003039 5.0e-11 71.6 51 68.6
Nn8g39115 Nelumbo nucifera HOM05D007429 ORTHO05D003505 5.0e-11 71.6 122 40.2
Aqoxy7G01463 Aquilegia oxysepala HOM05D007429 ORTHO05D003505 8.4e-11 70.9 132 43.9
ECA233G1441 Erigeron canadensis HOM05D007429 ORTHO05D003505 8.4e-11 70.9 47 76.6
Prupe.1G447500 Prunus persica HOM05D007429 ORTHO05D003505 1.1e-10 70.5 120 40.0
Thhalv10015136m.g Eutrema salsugineum HOM05D007429 ORTHO05D003505 1.9e-10 69.7 120 40.0
Nitab4.5_0000882g0040 Nicotiana tabacum HOM05D006762 ORTHO05D003505 1.9e-10 69.7 130 41.5
FvH4_2g35460 Fragaria vesca HOM05D007429 ORTHO05D003505 4.2e-10 68.6 122 42.6
Sed0003359 Sechium edule HOM05D007429 ORTHO05D003505 4.2e-10 68.6 122 43.4
Cpa.g.sc29.168 Carica papaya HOM05D006762 ORTHO05D003505 7.2e-10 67.8 133 40.6
FAN20G1676 Fragaria x ananassa HOM05D002792 ORTHO05D003039 7.2e-10 67.8 127 43.3
SalBow6G0204 Salvia bowleyana HOM05D006762 ORTHO05D003505 7.2e-10 67.8 133 38.3
Aqoxy7G00783 Aquilegia oxysepala HOM05D006762 ORTHO05D003505 2.1e-09 66.2 132 37.9
CARHR201590 Cardamine hirsuta HOM05D007429 ORTHO05D003505 2.1e-09 66.2 120 39.2
Gohir.D05G048100 Gossypium hirsutum HOM05D007429 ORTHO05D003505 2.1e-09 66.2 124 40.3
Nn6g35292 Nelumbo nucifera HOM05D007429 ORTHO05D003505 2.1e-09 66.2 120 37.5
Gohir.A05G046400 Gossypium hirsutum HOM05D007429 ORTHO05D003505 3.5e-09 65.5 120 40.0
Gohir.A08G249800 Gossypium hirsutum HOM05D007429 ORTHO05D003505 7.9e-09 64.3 120 41.7
PSO824G0083 Papaver somniferum HOM05D007429 ORTHO05D003505 1.0e-08 63.9 123 40.7
SalBow6G1716 Salvia bowleyana HOM05D006762 ORTHO05D003505 1.3e-08 63.5 131 37.4
Duzib168G1390 Durio zibethinus HOM05D007429 ORTHO05D003505 1.8e-08 63.2 122 40.2
PSO173G0075 Papaver somniferum HOM05D007429 ORTHO05D003505 2.3e-08 62.8 123 39.8
Migut.A01106 Erythranthe guttata HOM05D006762 ORTHO05D003505 3.9e-08 62.0 132 34.8
PGR031G3761 Punica granatum HOM05D007429 ORTHO05D003505 3.9e-08 62.0 122 38.5
COL.COLO4_37166 Corchorus olitorius HOM05D006762 ORTHO05D003505 6.7e-08 61.2 107 39.3
Nitab4.5_0001501g0020 Nicotiana tabacum HOM05D006762 ORTHO05D003505 6.7e-08 61.2 131 37.4
CANSAT25G2095 Cannabis sativa HOM05D007429 ORTHO05D003505 8.7e-08 60.8 120 39.2
Sed0021009 Sechium edule HOM05D006762 ORTHO05D003505 1.5e-07 60.1 51 51.0
ClCG10G002600 Citrullus lanatus HOM05D006762 ORTHO05D003505 1.9e-07 59.7 51 51.0
TAR629G0824 Trochodendron aralioides HOM05D006762 ORTHO05D003505 1.9e-07 59.7 132 40.2
arahy.Tifrunner.gnm1.ann1.YI4YN9 Arachis hypogaea HOM05D006762 ORTHO05D003505 2.5e-07 59.3 51 52.9
Lalb_Chr09g0330061 Lupinus albus HOM05D006762 ORTHO05D003505 2.5e-07 59.3 82 43.9
Manes.07G073601 Manihot esculenta HOM05D007429 ORTHO05D003505 2.5e-07 59.3 77 48.1
Ciclev10010039m.g Citrus clementina HOM05D007429 ORTHO05D003505 3.3e-07 58.9 120 39.2
MBI01_g42895_MAGBIO Magnolia biondii HOM05D007429 ORTHO05D003505 3.3e-07 58.9 45 64.4
Sabra16G0215100 Salix brachista HOM05D006762 ORTHO05D003505 3.3e-07 58.9 132 33.3
Medtr4g100820 Medicago truncatula HOM05D006762 ORTHO05D003505 4.3e-07 58.5 65 47.7
PGSC0003DMG400004817 Solanum tuberosum HOM05D006762 ORTHO05D003505 4.3e-07 58.5 133 35.3
Manes.01G081200 Manihot esculenta HOM05D006762 ORTHO05D003505 5.7e-07 58.2 132 33.3
Aa31csc22G110 Aethionema arabicum HOM05D006762 ORTHO05D003505 7.4e-07 57.8 101 40.6
CiPaw.11G079800 Carya illinoinensis HOM05D006762 ORTHO05D003505 7.4e-07 57.8 53 49.1
QL12p012005 Quercus lobata HOM05D006762 ORTHO05D003505 7.4e-07 57.8 46 52.2
Gorai.004G198000 Gossypium raimondii HOM05D006762 ORTHO05D003505 1.3e-06 57.0 134 35.1
GSVIVG01004713001 Vitis vinifera HOM05D006762 ORTHO05D003505 1.6e-06 56.6 135 35.6
CAN.G1058.38 Capsicum annuum HOM05D006762 ORTHO05D003505 2.2e-06 56.2 132 34.1
Ciclev10023003m.g Citrus clementina HOM05D006762 ORTHO05D003505 2.2e-06 56.2 86 39.5
MELO3C013933.2 Cucumis melo HOM05D006762 ORTHO05D003505 2.2e-06 56.2 47 51.1
GSVIVG01006992001 Vitis vinifera HOM05D006762 ORTHO05D003505 2.2e-06 56.2 135 34.8
CDE02G4418 Ceratophyllum demersum HOM05D007429 ORTHO05D003505 2.8e-06 55.8 65 47.7
Solyc08g078560.3 Solanum lycopersicum HOM05D006762 ORTHO05D003505 2.8e-06 55.8 47 51.1
GSVIVG01035615001 Vitis vinifera HOM05D007429 ORTHO05D003505 2.8e-06 55.8 120 40.0
Gohir.A08G169800 Gossypium hirsutum HOM05D006762 ORTHO05D003505 3.7e-06 55.5 134 33.6
Gohir.D08G188100 Gossypium hirsutum HOM05D006762 ORTHO05D003505 3.7e-06 55.5 134 33.6
Gorai.004G288500 Gossypium raimondii HOM05D007429 ORTHO05D003505 3.7e-06 55.5 112 39.3
unitig_21.g20319 Utricularia gibba HOM05D006762 ORTHO05D003505 3.7e-06 55.5 47 51.1
FAN13G0097 Fragaria x ananassa HOM05D000502 ORTHO05D000356 8.2e-06 54.3 120 34.2
Potri.017G068600 Populus trichocarpa HOM05D006762 ORTHO05D003505 8.2e-06 54.3 47 51.1


User provided reference genes

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