Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold163G38046 Striga asiatica HOM05D004865 ORTHO05D005949 2.5e-147 525.4 264 100.0
SGA_v2.0_scaffold11G05644 Striga asiatica HOM05D004865 ORTHO05D005949 1.4e-89 333.6 259 66.4
SGA_v2.0_scaffold105G30447 Striga asiatica HOM05D004865 ORTHO05D005949 2.3e-71 273.1 255 54.1
SGA_v2.0_scaffold11G05649 Striga asiatica HOM05D004865 ORTHO05D005949 2.3e-68 263.1 204 64.7
Lj3A898T31 Lonicera japonica HOM05D004865 ORTHO05D005949 2.1e-32 143.7 210 41.0
Sed0022242 Sechium edule HOM05D004865 ORTHO05D005949 1.3e-31 141.0 214 40.2
ClCG11G000590 Citrullus lanatus HOM05D004865 ORTHO05D005949 3.9e-31 139.4 213 39.9
MD09G1162600 Malus domestica HOM05D004865 ORTHO05D005949 1.1e-28 131.3 211 38.4
ClCG11G000680 Citrullus lanatus HOM05D004865 ORTHO05D005949 3.1e-28 129.8 212 37.7
Duzib212G1045 Durio zibethinus HOM05D004865 ORTHO05D005949 5.3e-28 129.0 207 36.7
MD09G1163100 Malus domestica HOM05D004865 ORTHO05D005949 9.0e-28 128.3 210 35.7
ClCG03G011140 Citrullus lanatus HOM05D004865 ORTHO05D005949 1.5e-27 127.5 214 37.9
CsaV3_1G044030 Cucumis sativus L. HOM05D004865 ORTHO05D005949 2.6e-27 126.7 215 37.2
ClCG03G011170 Citrullus lanatus HOM05D004865 ORTHO05D005949 7.6e-27 125.2 211 37.9
MD09G1162900 Malus domestica HOM05D004865 ORTHO05D005949 2.9e-26 123.2 211 37.4
MD09G1162700 Malus domestica HOM05D004865 ORTHO05D005949 3.8e-26 122.9 213 39.0
Sc22g0001740 Simmondsia chinensis HOM05D004865 ORTHO05D005949 8.4e-26 121.7 214 36.4
AUR62036568 Chenopodium quinoa HOM05D004865 ORTHO05D005949 1.1e-25 121.3 200 36.0
FAN22G1472 Fragaria x ananassa HOM05D004865 ORTHO05D005949 3.2e-25 119.8 213 36.6
HanXRQChr14g0437021 Helianthus annuus HOM05D000041 ORTHO05D000452 3.2e-25 119.8 206 36.4
AUR62031151 Chenopodium quinoa HOM05D004865 ORTHO05D005949 4.2e-25 119.4 200 35.5
Actinidia05767 Actinidia chinensis HOM05D004865 ORTHO05D005949 7.1e-25 118.6 207 33.8
Actinidia30931 Actinidia chinensis HOM05D004865 ORTHO05D005949 7.1e-25 118.6 209 35.4
DCAR_015954 Daucus carota HOM05D004865 ORTHO05D005949 9.3e-25 118.2 178 37.1
MD17G1147700 Malus domestica HOM05D004865 ORTHO05D005949 9.3e-25 118.2 175 41.7
MELO3C010083.2 Cucumis melo HOM05D004865 ORTHO05D005949 2.1e-24 117.1 211 35.5
Sc22g0001760 Simmondsia chinensis HOM05D004865 ORTHO05D005949 2.1e-24 117.1 213 36.2
EL10Ac8g20499 Beta vulgaris HOM05D004865 ORTHO05D005949 1.0e-23 114.8 200 36.5
AUR62031152 Chenopodium quinoa HOM05D004865 ORTHO05D005949 1.0e-23 114.8 206 36.9
Ah.14g087230 Amaranthus hybridus HOM05D004865 ORTHO05D005949 1.3e-23 114.4 199 35.7
Ah.14g087240 Amaranthus hybridus HOM05D004865 ORTHO05D005949 1.3e-23 114.4 206 35.9
AUR62036569 Chenopodium quinoa HOM05D004865 ORTHO05D005949 1.3e-23 114.4 206 36.9
Actinidia30932 Actinidia chinensis HOM05D004865 ORTHO05D005949 3.0e-23 113.2 209 34.9
AUR62012544 Chenopodium quinoa HOM05D004865 ORTHO05D005949 3.0e-23 113.2 216 34.7
EL10As6g23632 Beta vulgaris HOM05D004865 ORTHO05D005949 3.9e-23 112.8 214 34.1
Lsat_1_v5_gn_8_2701 Lactuca sativa HOM05D000041 ORTHO05D000452 3.9e-23 112.8 207 35.3
FvH4_6g36010 Fragaria vesca HOM05D004865 ORTHO05D005949 6.7e-23 112.1 213 36.2
Gohir.A10G138700 Gossypium hirsutum HOM05D004865 ORTHO05D005949 6.7e-23 112.1 206 31.1
Cre07.g321800 Chlamydomonas reinhardtii HOM05D004865 ORTHO05D005949 8.7e-23 111.7 224 33.9
DCAR_016015 Daucus carota HOM05D004865 ORTHO05D005949 1.1e-22 111.3 200 32.5
Prupe.2G116800 Prunus persica HOM05D004865 ORTHO05D005949 1.1e-22 111.3 210 33.3
AUR62014652 Chenopodium quinoa HOM05D004865 ORTHO05D005949 1.5e-22 110.9 213 34.7
ECA233G0690 Erigeron canadensis HOM05D000041 ORTHO05D000452 1.5e-22 110.9 215 34.4
Gohir.D10G128100 Gossypium hirsutum HOM05D004865 ORTHO05D005949 3.3e-22 109.8 206 31.1
Gorai.011G141300 Gossypium raimondii HOM05D004865 ORTHO05D005949 3.3e-22 109.8 206 31.1
EL10As6g23631 Beta vulgaris HOM05D004865 ORTHO05D005949 7.4e-22 108.6 214 33.6
MD05G1102400 Malus domestica HOM05D004865 ORTHO05D005949 7.4e-22 108.6 211 37.4
DCAR_016016 Daucus carota HOM05D004865 ORTHO05D005949 9.6e-22 108.2 205 37.1
Ah.06g181840 Amaranthus hybridus HOM05D004865 ORTHO05D005949 1.3e-21 107.8 210 35.2
Sc24g0002410 Simmondsia chinensis HOM05D004865 ORTHO05D005949 1.3e-21 107.8 222 34.2
Hma1.2p1_0543F.1_g175180 Hydrangea macrophylla HOM05D004865 ORTHO05D005949 2.8e-21 106.7 207 36.2
Hma1.2p1_3336F.1_g335335 Hydrangea macrophylla HOM05D004865 ORTHO05D005949 2.8e-21 106.7 207 36.2
Lj6C375T0 Lonicera japonica HOM05D004865 ORTHO05D005949 3.7e-21 106.3 169 36.7
FAN02G0162 Fragaria x ananassa HOM05D004865 ORTHO05D005949 4.8e-21 105.9 204 34.8
FAN09G4882 Fragaria x ananassa HOM05D004865 ORTHO05D005949 8.1e-21 105.1 237 32.9
Zm00001eb137370 Zea mays HOM05D004865 ORTHO05D005949 1.1e-20 104.8 199 34.2
Os04g0308500 Oryza sativa ssp. japonica HOM05D004865 ORTHO05D005949 4.0e-20 102.8 181 34.3
Os04g0310100 Oryza sativa ssp. japonica HOM05D004865 ORTHO05D005949 4.0e-20 102.8 181 34.3
Sc09g0006530 Simmondsia chinensis HOM05D004865 ORTHO05D005949 5.3e-20 102.4 214 32.2
Sc24g0002420 Simmondsia chinensis HOM05D004865 ORTHO05D005949 9.0e-20 101.7 221 34.4
Sc09g0006350 Simmondsia chinensis HOM05D004865 ORTHO05D005949 1.2e-19 101.3 178 34.3
DCAR_015955 Daucus carota HOM05D004865 ORTHO05D005949 2.6e-19 100.1 205 35.1
Zm00001eb137430 Zea mays HOM05D004865 ORTHO05D005949 4.5e-19 99.4 199 34.2
AUR62027395 Chenopodium quinoa HOM05D004865 ORTHO05D005949 5.8e-19 99.0 183 35.5
AUR62027396 Chenopodium quinoa HOM05D004865 ORTHO05D005949 5.8e-19 99.0 169 36.7
MD17G1148100 Malus domestica HOM05D004865 ORTHO05D005949 5.8e-19 99.0 158 39.2
MD17G1148200 Malus domestica HOM05D004865 ORTHO05D005949 5.8e-19 99.0 158 39.2
Prupe.1G577300 Prunus persica HOM05D004865 ORTHO05D005949 7.6e-19 98.6 162 38.3
EL10Ac6g13635 Beta vulgaris HOM05D004865 ORTHO05D005949 1.3e-18 97.8 213 31.5
AUR62044724 Chenopodium quinoa HOM05D004865 ORTHO05D005949 1.7e-18 97.4 215 34.0
Sc17g0004370 Simmondsia chinensis HOM05D004865 ORTHO05D005949 3.8e-18 96.3 161 34.8
Sc22g0001750 Simmondsia chinensis HOM05D004865 ORTHO05D005949 3.8e-18 96.3 217 33.2
Zm00001eb137410 Zea mays HOM05D004865 ORTHO05D005949 4.9e-18 95.9 180 33.9
Sc22g0001710 Simmondsia chinensis HOM05D004865 ORTHO05D005949 8.4e-18 95.1 216 31.9
Sc22g0001730 Simmondsia chinensis HOM05D004865 ORTHO05D005949 8.4e-18 95.1 215 32.1
Lj1P308T9 Lonicera japonica HOM05D004865 ORTHO05D005949 1.1e-17 94.7 110 43.6
Sc09g0006330 Simmondsia chinensis HOM05D004865 ORTHO05D005949 1.4e-17 94.4 215 32.6
Zm00001eb137380 Zea mays HOM05D004865 ORTHO05D005949 4.2e-17 92.8 180 32.8
Ah.14g087250 Amaranthus hybridus HOM05D004865 ORTHO05D005949 5.5e-17 92.4 198 32.3
Os04g0308400 Oryza sativa ssp. japonica HOM05D004865 ORTHO05D005949 5.5e-17 92.4 209 31.6
Os04g0310200 Oryza sativa ssp. japonica HOM05D004865 ORTHO05D005949 5.5e-17 92.4 209 31.6
Sc06g0005920 Simmondsia chinensis HOM05D004865 ORTHO05D005949 7.1e-17 92.0 215 31.6
EL10Ac8g20500 Beta vulgaris HOM05D004865 ORTHO05D005949 2.1e-16 90.5 206 32.0
Lj1P501T11 Lonicera japonica HOM05D004865 ORTHO05D005949 2.1e-16 90.5 110 42.7
Lj1P506T13 Lonicera japonica HOM05D004865 ORTHO05D005949 2.1e-16 90.5 110 42.7
Sc09g0006340 Simmondsia chinensis HOM05D004865 ORTHO05D005949 4.6e-16 89.4 203 32.0
AUR62044116 Chenopodium quinoa HOM05D004865 ORTHO05D005949 7.9e-16 88.6 143 35.0
Hma1.2p1_1768F.1_g301530 Hydrangea macrophylla HOM05D004865 ORTHO05D005949 1.0e-15 88.2 141 37.6
Lj1P314T6 Lonicera japonica HOM05D004865 ORTHO05D005949 1.0e-15 88.2 110 41.8
HanXRQChr03g0060861 Helianthus annuus HOM05D004865 ORTHO05D005949 2.3e-15 87.0 215 31.2
Lj1P506T10 Lonicera japonica HOM05D004865 ORTHO05D005949 3.0e-15 86.7 110 41.8
Lj1P515T6 Lonicera japonica HOM05D004865 ORTHO05D005949 3.0e-15 86.7 110 41.8
AUR62012571 Chenopodium quinoa HOM05D004865 ORTHO05D005949 3.9e-15 86.3 166 31.3
Lj6P378T3 Lonicera japonica HOM05D004865 ORTHO05D005949 3.9e-15 86.3 110 39.1
Lj6P379T11 Lonicera japonica HOM05D004865 ORTHO05D005949 3.9e-15 86.3 110 39.1
Sc02g0003580 Simmondsia chinensis HOM05D004865 ORTHO05D005949 3.9e-15 86.3 219 32.4
ECA233G5215 Erigeron canadensis HOM05D004865 ORTHO05D005949 5.1e-15 85.9 199 31.2
ECA233G6014 Erigeron canadensis HOM05D004865 ORTHO05D005949 8.7e-15 85.1 212 33.0
HanXRQChr03g0060851 Helianthus annuus HOM05D004865 ORTHO05D005949 1.1e-14 84.7 210 31.4
AUR62014649 Chenopodium quinoa HOM05D004865 ORTHO05D005949 1.9e-14 84.0 146 35.6
Lj6P371T8 Lonicera japonica HOM05D004865 ORTHO05D005949 1.9e-14 84.0 110 37.3
Lj6P373T4 Lonicera japonica HOM05D004865 ORTHO05D005949 2.5e-14 83.6 112 37.5
HanXRQChr13g0416771 Helianthus annuus HOM05D004865 ORTHO05D005949 3.3e-14 83.2 215 32.6
Ah.14g087270 Amaranthus hybridus HOM05D004865 ORTHO05D005949 4.3e-14 82.8 161 30.4
Sc22g0001720 Simmondsia chinensis HOM05D004865 ORTHO05D005949 7.4e-14 82.0 133 36.8
ECA233G2698 Erigeron canadensis HOM05D004865 ORTHO05D005949 2.1e-13 80.5 212 31.1
Sc23g0005380 Simmondsia chinensis HOM05D004865 ORTHO05D005949 6.3e-13 79.0 196 31.6
HanXRQChr14g0461501 Helianthus annuus HOM05D004865 ORTHO05D005949 8.2e-13 78.6 108 41.7
AUR62012547 Chenopodium quinoa HOM05D004865 ORTHO05D005949 1.4e-12 77.8 206 30.1
FAN14G5541 Fragaria x ananassa HOM05D004865 ORTHO05D005949 1.4e-12 77.8 100 41.0
EL10Ac6g13634 Beta vulgaris HOM05D004865 ORTHO05D005949 6.9e-12 75.5 138 34.8
Lsat_1_v5_gn_6_87560 Lactuca sativa HOM05D004865 ORTHO05D005949 1.5e-11 74.3 214 30.8
FAN14G3467 Fragaria x ananassa HOM05D004865 ORTHO05D005949 2.6e-11 73.6 100 39.0
HanXRQChr13g0416741 Helianthus annuus HOM05D004865 ORTHO05D005949 3.4e-11 73.2 215 31.6
Duzib052G0039 Durio zibethinus HOM05D004865 ORTHO05D005949 4.5e-11 72.8 207 30.0
ECA233G1731 Erigeron canadensis HOM05D004865 ORTHO05D005949 6.5e-10 68.9 102 39.2
CSS0005385 Camellia sinensis var. sinensis HOM05D004865 ORTHO05D005949 1.1e-09 68.2 164 30.5
MD17G1148000 Malus domestica HOM05D004865 ORTHO05D005949 1.9e-09 67.4 214 29.9
Sc16g0002940 Simmondsia chinensis HOM05D004865 ORTHO05D005949 1.9e-09 67.4 111 35.1
ECA233G0596 Erigeron canadensis HOM05D004865 ORTHO05D000001 1.2e-08 64.7 197 29.4
Sed0017379 Sechium edule HOM05D004865 ORTHO05D005949 1.6e-08 64.3 192 28.1
Sc24g0002440 Simmondsia chinensis HOM05D004865 ORTHO05D005949 1.6e-08 64.3 153 30.7
CSS0032746 Camellia sinensis var. sinensis HOM05D004865 ORTHO05D005949 2.1e-08 63.9 191 27.7
AUR62012550 Chenopodium quinoa HOM05D004865 ORTHO05D005949 2.1e-08 63.9 212 27.8
HanXRQChr17g0555801 Helianthus annuus HOM05D004865 ORTHO05D005949 1.3e-07 61.2 242 28.1
HanXRQChr17g0555831 Helianthus annuus HOM05D004865 ORTHO05D005949 1.3e-07 61.2 242 28.1
CsaV3_4G030090 Cucumis sativus L. HOM05D004865 ORTHO05D005949 1.1e-06 58.2 59 44.1
AUR62016123 Chenopodium quinoa HOM05D009434 ORTHO05D011504 3.3e-06 56.6 165 26.1
AUR62014650 Chenopodium quinoa HOM05D004865 ORTHO05D005949 7.4e-06 55.5 94 37.2
Sc23g0005400 Simmondsia chinensis HOM05D004865 ORTHO05D005949 7.4e-06 55.5 131 33.6


User provided reference genes

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