Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold163G38045 Striga asiatica HOM05D008906 ORTHO05D010752 1.9e-212 742.3 390 100.0
ClCG03G011130 Citrullus lanatus HOM05D008906 ORTHO05D010752 1.4e-61 241.1 385 37.9
ClCG03G011160 Citrullus lanatus HOM05D008906 ORTHO05D010752 1.0e-59 235.0 385 37.7
Sed0001310 Sechium edule HOM05D008906 ORTHO05D010752 2.7e-57 226.9 385 35.3
Sed0004553 Sechium edule HOM05D008906 ORTHO05D010752 8.0e-57 225.3 385 36.9
ClCG11G000600 Citrullus lanatus HOM05D008906 ORTHO05D010752 1.3e-54 218.0 385 34.8
MELO3C010005.2 Cucumis melo HOM05D008906 ORTHO05D010752 4.8e-54 216.1 386 36.0
CsaV3_1G044120 Cucumis sativus L. HOM05D008906 ORTHO05D010752 1.1e-53 214.9 386 35.5
Sed0018125 Sechium edule HOM05D008906 ORTHO05D010752 2.2e-51 207.2 387 34.4
Lj3A898T32 Lonicera japonica HOM05D008906 ORTHO05D010752 1.4e-48 198.0 385 34.0
SGA_v2.0_scaffold11G05641 Striga asiatica HOM05D008906 ORTHO05D010752 2.2e-46 190.7 209 52.2
MD10G1107800 Malus domestica HOM05D008906 ORTHO05D010752 3.7e-46 189.9 384 34.4
MD09G1162800 Malus domestica HOM05D008906 ORTHO05D010752 4.0e-40 169.9 389 31.9
ClCG03G011150 Citrullus lanatus HOM05D008906 ORTHO05D010752 5.4e-37 159.5 385 29.6
MD17G1147800 Malus domestica HOM05D008906 ORTHO05D010752 5.4e-37 159.5 389 31.6
Lj1A515T9 Lonicera japonica HOM05D008906 ORTHO05D010752 1.1e-34 151.8 321 32.4
Os04g0308600 Oryza sativa ssp. japonica HOM05D008906 ORTHO05D010752 6.6e-27 125.9 386 26.9
Os04g0309900 Oryza sativa ssp. japonica HOM05D008906 ORTHO05D010752 2.0e-23 114.4 386 25.9
AUR62036570 Chenopodium quinoa HOM05D008906 ORTHO05D010752 2.7e-20 104.0 388 24.2
DCAR_016018 Daucus carota HOM05D008906 ORTHO05D010752 4.6e-20 103.2 396 25.5
Zm00001eb137480 Zea mays HOM05D008906 ORTHO05D010752 1.3e-19 101.7 392 25.3
AUR62027397 Chenopodium quinoa HOM05D008906 ORTHO05D010752 5.1e-19 99.8 392 24.7
DCAR_015953 Daucus carota HOM05D008906 ORTHO05D010752 5.1e-19 99.8 391 24.8
EL10Ac8g20498 Beta vulgaris HOM05D008906 ORTHO05D010752 6.6e-19 99.4 381 24.4
Cre07.g321750 Chlamydomonas reinhardtii HOM05D008906 ORTHO05D010752 1.1e-18 98.6 396 26.8
Ah.14g087280 Amaranthus hybridus HOM05D008906 ORTHO05D010752 3.3e-18 97.1 384 22.1
CSS0023788 Camellia sinensis var. sinensis HOM05D008906 ORTHO05D010752 3.3e-18 97.1 128 38.3
DCAR_016019 Daucus carota HOM05D008906 ORTHO05D010752 2.1e-17 94.4 361 25.5
Ah.14g087260 Amaranthus hybridus HOM05D008906 ORTHO05D010752 1.1e-16 92.0 389 22.6
Hma1.2p1_0543F.1_g175190 Hydrangea macrophylla HOM05D008906 ORTHO05D010752 1.1e-16 92.0 124 41.9
Sc05g0004700 Simmondsia chinensis HOM05D014687 ORTHO05D010752 1.8e-16 91.3 447 22.4
Actinidia30933 Actinidia chinensis HOM05D008906 ORTHO05D010752 2.3e-16 90.9 394 24.9
AUR62031153 Chenopodium quinoa HOM05D008906 ORTHO05D010752 2.9e-14 84.0 388 22.4
Zm00001eb137390 Zea mays HOM05D008906 ORTHO05D010752 6.4e-14 82.8 392 23.5
EL10Ac6g13638 Beta vulgaris HOM05D008906 ORTHO05D010752 4.6e-12 76.6 224 27.7
Sc08g0007420 Simmondsia chinensis HOM05D014687 ORTHO05D010752 7.8e-12 75.9 431 24.8
Dinv13668 Davidia involucrata HOM05D008906 ORTHO05D010752 3.9e-11 73.6 106 37.7
Sc02g0003570 Simmondsia chinensis HOM05D014687 ORTHO05D010752 3.6e-09 67.0 440 23.2
EL10Ac6g13636 Beta vulgaris HOM05D008906 ORTHO05D010752 8.9e-08 62.4 391 23.3


User provided reference genes

Program Settings