Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold162G37946 Striga asiatica HOM05D004348 ORTHO05D006191 7.6e-58 226.9 108 100.0
SGA_v2.0_scaffold6G03459 Striga asiatica HOM05D004348 ORTHO05D006191 6.5e-25 117.5 98 63.3
SGA_v2.0_scaffold42G16154 Striga asiatica HOM05D000627 ORTHO05D006191 6.3e-12 74.3 51 74.5
Oeu003300.1 Olea europaea HOM05D004348 ORTHO05D006191 3.5e-10 68.6 38 78.9
Oeu057258.1 Olea europaea HOM05D004348 ORTHO05D006191 3.5e-10 68.6 38 78.9
Migut.N02696 Erythranthe guttata HOM05D004348 ORTHO05D006191 4.5e-10 68.2 31 93.5
SHI08298 Sapria himalayana HOM05D004348 ORTHO05D006191 4.5e-10 68.2 38 76.3
SGA_v2.0_scaffold226G43137 Striga asiatica HOM05D004348 ORTHO05D006191 4.5e-10 68.2 31 93.5
Ca_13305_v3 Cicer arietinum L. HOM05D004348 ORTHO05D006191 7.7e-10 67.4 38 76.3
Haze_17559 Corylus avellana HOM05D004348 ORTHO05D006191 7.7e-10 67.4 31 90.3
Haze_18739 Corylus avellana HOM05D004348 ORTHO05D006191 7.7e-10 67.4 31 90.3
MELO3C016737.2 Cucumis melo HOM05D004348 ORTHO05D006191 7.7e-10 67.4 33 87.9
FvH4_2g34840 Fragaria vesca HOM05D004348 ORTHO05D006191 7.7e-10 67.4 39 74.4
FAN15G1136 Fragaria x ananassa HOM05D004348 ORTHO05D006191 7.7e-10 67.4 39 74.4
FAN27G3414 Fragaria x ananassa HOM05D004348 ORTHO05D006191 7.7e-10 67.4 39 74.4
Nitab4.5_0000068g0550 Nicotiana tabacum HOM05D004348 ORTHO05D006191 7.7e-10 67.4 38 76.3
Peaxi162Scf00528g00825 Petunia axillaris HOM05D004348 ORTHO05D006191 7.7e-10 67.4 38 76.3
Solyc04g079280.4 Solanum lycopersicum HOM05D004348 ORTHO05D006191 7.7e-10 67.4 38 76.3
Sopen04g032870 Solanum pennellii HOM05D004348 ORTHO05D006191 7.7e-10 67.4 38 76.3
PGSC0003DMG400007988 Solanum tuberosum HOM05D004348 ORTHO05D006191 7.7e-10 67.4 38 76.3
Atru.chr13.637 Acer truncatum HOM05D004348 ORTHO05D006191 1.0e-09 67.0 38 76.3
Actinidia15256 Actinidia chinensis HOM05D004348 ORTHO05D006191 1.0e-09 67.0 38 76.3
Aqoxy5G01277 Aquilegia oxysepala HOM05D004348 ORTHO05D006191 1.0e-09 67.0 39 74.4
CSS0012651 Camellia sinensis var. sinensis HOM05D004348 ORTHO05D006191 1.0e-09 67.0 38 76.3
CANSAT78G0057 Cannabis sativa HOM05D004348 ORTHO05D006191 1.0e-09 67.0 38 76.3
CARHR242470 Cardamine hirsuta HOM05D004348 ORTHO05D006191 1.0e-09 67.0 35 82.9
Cpa.g.c24415.13 Carica papaya HOM05D004348 ORTHO05D006191 1.0e-09 67.0 38 76.3
AUR62022445 Chenopodium quinoa HOM05D004348 ORTHO05D006191 1.0e-09 67.0 38 76.3
AUR62039313 Chenopodium quinoa HOM05D004348 ORTHO05D006191 1.0e-09 67.0 38 76.3
Ciclev10000175m.g Citrus clementina HOM05D004348 ORTHO05D006191 1.0e-09 67.0 38 76.3
COL.COLO4_26463 Corchorus olitorius HOM05D004348 ORTHO05D006191 1.0e-09 67.0 38 76.3
CsaV3_4G034150 Cucumis sativus L. HOM05D004348 ORTHO05D006191 1.0e-09 67.0 38 76.3
Dinv35980 Davidia involucrata HOM05D004348 ORTHO05D006191 1.0e-09 67.0 38 76.3
Eucgr.F02367 Eucalyptus grandis HOM05D004348 ORTHO05D006191 1.0e-09 67.0 38 76.3
Gohir.A01G118500 Gossypium hirsutum HOM05D004348 ORTHO05D006191 1.0e-09 67.0 38 76.3
Gohir.D01G106800 Gossypium hirsutum HOM05D004348 ORTHO05D006191 1.0e-09 67.0 38 76.3
Gorai.002G131100 Gossypium raimondii HOM05D004348 ORTHO05D006191 1.0e-09 67.0 38 76.3
Lj4A53T53 Lonicera japonica HOM05D004348 ORTHO05D006191 1.0e-09 67.0 38 76.3
MD08G1105800 Malus domestica HOM05D004348 ORTHO05D006191 1.0e-09 67.0 38 76.3
Medtr1g019960 Medicago truncatula HOM05D004348 ORTHO05D006191 1.0e-09 67.0 38 76.3
Prupe.1G440200 Prunus persica HOM05D004348 ORTHO05D006191 1.0e-09 67.0 38 76.3
PGR031G2748 Punica granatum HOM05D004348 ORTHO05D006191 1.0e-09 67.0 38 76.3
RcHm_v2.0_Chr6g0307221 Rosa chinensis HOM05D004348 ORTHO05D006191 1.0e-09 67.0 38 76.3
Sp7g32110 Schrenkiella parvula HOM05D004348 ORTHO05D006191 1.0e-09 67.0 38 76.3
Sed0015301 Sechium edule HOM05D004348 ORTHO05D006191 1.0e-09 67.0 38 76.3
TPR.G40548 Trifolium pratense HOM05D004348 ORTHO05D006191 1.0e-09 67.0 38 76.3
vmacro21553 Vaccinium macrocarpon HOM05D004348 ORTHO05D006191 1.0e-09 67.0 38 76.3
AL7G16960 Arabidopsis lyrata HOM05D004348 ORTHO05D006191 1.3e-09 66.6 31 90.3
AT4G34310 Arabidopsis thaliana HOM05D004348 ORTHO05D006191 1.3e-09 66.6 31 90.3
EL10Ac1g01783 Beta vulgaris HOM05D004348 ORTHO05D006191 1.3e-09 66.6 39 71.8
A01p04110 Brassica napus HOM05D004348 ORTHO05D006191 1.3e-09 66.6 31 90.3
C01p04470 Brassica napus HOM05D004348 ORTHO05D006191 1.3e-09 66.6 31 90.3
BolC1t00433H Brassica oleracea HOM05D004348 ORTHO05D006191 1.3e-09 66.6 31 90.3
BraA01t00399Z Brassica rapa HOM05D004348 ORTHO05D006191 1.3e-09 66.6 31 90.3
Cfa018516 Carpinus fangiana HOM05D004348 ORTHO05D006191 1.3e-09 66.6 38 73.7
CiPaw.16G046500 Carya illinoinensis HOM05D004348 ORTHO05D006191 1.3e-09 66.6 38 73.7
Cc10_g04460 Coffea canephora HOM05D004348 ORTHO05D006191 1.3e-09 66.6 31 90.3
Thhalv10024246m.g Eutrema salsugineum HOM05D004348 ORTHO05D006191 1.3e-09 66.6 31 90.3
Manes.05G171200 Manihot esculenta HOM05D004348 ORTHO05D006191 1.3e-09 66.6 31 90.3
Rhsim06G0047100 Rhododendron simsii HOM05D004348 ORTHO05D006191 1.3e-09 66.6 38 73.7
Hund26625 Selenicereus undatus HOM05D004348 ORTHO05D006191 1.3e-09 66.6 39 71.8
THA.LOC104806947 Tarenaya hassleriana HOM05D004348 ORTHO05D006191 1.3e-09 66.6 38 73.7
TAR625G1112 Trochodendron aralioides HOM05D004348 ORTHO05D006191 1.3e-09 66.6 31 90.3
HPP92_019296 Vanilla planifolia HOM05D004348 ORTHO05D006191 1.3e-09 66.6 31 90.3
HPP92_028299 Vanilla planifolia HOM05D004348 ORTHO05D006191 1.3e-09 66.6 31 90.3
GSVIVG01009553001 Vitis vinifera HOM05D004348 ORTHO05D006191 1.3e-09 66.6 31 90.3
CAN.G371.44 Capsicum annuum HOM05D004348 ORTHO05D006191 1.7e-09 66.2 38 73.7
HanXRQChr02g0038751 Helianthus annuus HOM05D004348 ORTHO05D006191 1.7e-09 66.2 39 71.8
Hma1.2p1_0337F.1_g129300 Hydrangea macrophylla HOM05D004348 ORTHO05D006191 1.7e-09 66.2 31 87.1
arahy.Tifrunner.gnm1.ann1.2EEB7P Arachis hypogaea HOM05D004348 ORTHO05D006191 2.2e-09 65.9 38 73.7
arahy.Tifrunner.gnm1.ann1.3D95JG Arachis hypogaea HOM05D004348 ORTHO05D006191 2.2e-09 65.9 38 73.7
CDE10G0798 Ceratophyllum demersum HOM05D004348 ORTHO05D006191 2.2e-09 65.9 39 71.8
DCAR_020931 Daucus carota HOM05D004348 ORTHO05D006191 2.2e-09 65.9 38 73.7
Atru.chr1.1668 Acer truncatum HOM05D004348 ORTHO05D006191 2.9e-09 65.5 38 73.7
Carub.0007s0605 Capsella rubella HOM05D004348 ORTHO05D006191 2.9e-09 65.5 31 87.1
CDE10G0919 Ceratophyllum demersum HOM05D004348 ORTHO05D006191 2.9e-09 65.5 38 73.7
ClCG05G019730 Citrullus lanatus HOM05D004348 ORTHO05D006191 2.9e-09 65.5 38 73.7
Psat6g012000 Pisum sativum HOM05D004348 ORTHO05D006191 2.9e-09 65.5 38 73.7
SEGI_07910 Sequoiadendron giganteum HOM05D004348 ORTHO05D006191 2.9e-09 65.5 31 83.9
Lsat_1_v5_gn_1_20621 Lactuca sativa HOM05D004348 ORTHO05D006191 3.8e-09 65.1 39 69.2
Nn5g30212 Nelumbo nucifera HOM05D004348 ORTHO05D006191 3.8e-09 65.1 31 87.1
Sc02g0006980 Simmondsia chinensis HOM05D004348 ORTHO05D006191 3.8e-09 65.1 39 69.2
ECA247G1923 Erigeron canadensis HOM05D004348 ORTHO05D006191 5.0e-09 64.7 39 66.7
Phvul.001G020000 Phaseolus vulgaris HOM05D004348 ORTHO05D006191 5.0e-09 64.7 38 73.7
Potri.014G034100 Populus trichocarpa HOM05D004348 ORTHO05D006191 5.0e-09 64.7 31 87.1
Sed0012719 Sechium edule HOM05D004348 ORTHO05D006191 6.5e-09 64.3 38 71.1
ECA232G4920 Erigeron canadensis HOM05D004348 ORTHO05D006191 8.5e-09 63.9 39 66.7
MD08G1105600 Malus domestica HOM05D004348 ORTHO05D006191 8.5e-09 63.9 38 73.7
MD15G1086600 Malus domestica HOM05D004348 ORTHO05D006191 8.5e-09 63.9 38 73.7
unitig_26.g10060 Utricularia gibba HOM05D004348 ORTHO05D006191 8.5e-09 63.9 38 73.7
HanXRQChr16g0507461 Helianthus annuus HOM05D004348 ORTHO05D006191 1.1e-08 63.5 38 68.4
Sabra14G0024200 Salix brachista HOM05D004348 ORTHO05D006191 1.1e-08 63.5 31 83.9
ATR1159G040 Amborella trichopoda HOM05D004348 ORTHO05D006191 1.5e-08 63.2 39 69.2
QL02p005708 Quercus lobata HOM05D004348 ORTHO05D006191 1.5e-08 63.2 38 71.1
SMO144G0009 Selaginella moellendorffii HOM05D004348 ORTHO05D006191 1.5e-08 63.2 31 80.6
Duzib093G0393 Durio zibethinus HOM05D004348 ORTHO05D006191 1.9e-08 62.8 31 83.9
Lj5g0025546 Lotus japonicus HOM05D004348 ORTHO05D006191 2.5e-08 62.4 38 71.1
VMungo0647G0261 Vigna mungo HOM05D004348 ORTHO05D006191 2.5e-08 62.4 38 71.1
Lsat_1_v5_gn_4_124060 Lactuca sativa HOM05D004348 ORTHO05D006191 3.2e-08 62.0 38 65.8
Mapoly0033s0109 Marchantia polymorpha HOM05D004348 ORTHO05D006191 3.2e-08 62.0 39 64.1
Os03g0185500 Oryza sativa ssp. japonica HOM05D004348 ORTHO05D006191 3.2e-08 62.0 38 68.4
PSO675G6987 Papaver somniferum HOM05D004348 ORTHO05D006191 4.2e-08 61.6 36 72.2
Zm00001eb006390 Zea mays HOM05D004348 ORTHO05D006191 1.2e-07 60.1 30 83.3
Lalb_Chr24g0399211 Lupinus albus HOM05D004348 ORTHO05D006191 3.6e-07 58.5 38 65.8
CiPaw.16G046800 Carya illinoinensis HOM05D004348 ORTHO05D006191 4.7e-07 58.2 38 68.4
AagrBONN_evm.TU.Sc2ySwM_344.1636 Anthoceros agrestis HOM05D004348 ORTHO05D006191 1.0e-06 57.0 39 61.5
Pp3c17_5660 Physcomitrium patens HOM05D004348 ORTHO05D006191 4.0e-06 55.1 31 67.7


User provided reference genes

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