Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold161G37821 Striga asiatica HOM05D008121 ORTHO05D009878 2.3e-70 268.9 141 100.0
Migut.I00480 Erythranthe guttata HOM05D008121 ORTHO05D009878 7.2e-32 141.0 139 61.2
MSTRG.22918 Avicennia marina HOM05D008121 ORTHO05D009878 8.8e-22 107.5 141 51.8
Nitab4.5_0005418g0010 Nicotiana tabacum HOM05D008121 ORTHO05D009878 4.1e-19 98.6 143 46.9
Nitab4.5_0005327g0050 Nicotiana tabacum HOM05D008121 ORTHO05D009878 6.9e-19 97.8 135 46.7
Solyc03g110980.4 Solanum lycopersicum HOM05D008121 ORTHO05D009878 3.4e-18 95.5 143 46.2
PGSC0003DMG400015199 Solanum tuberosum HOM05D008121 ORTHO05D009878 5.9e-18 94.7 143 45.5
Sopen03g030170 Solanum pennellii HOM05D008121 ORTHO05D009878 1.0e-17 94.0 143 45.5
Oeu018378.1 Olea europaea HOM05D008121 ORTHO05D009878 2.2e-17 92.8 122 51.6
CSS0015443 Camellia sinensis var. sinensis HOM05D008121 ORTHO05D009878 5.5e-16 88.2 145 42.8
Hma1.2p1_0014F.1_g009910 Hydrangea macrophylla HOM05D008121 ORTHO05D009878 1.2e-15 87.0 139 46.8
CAN.G352.52 Capsicum annuum HOM05D008121 ORTHO05D009878 3.9e-14 82.0 139 41.0
Dinv38465 Davidia involucrata HOM05D008121 ORTHO05D009878 6.7e-14 81.3 150 47.3
Cc04_g10260 Coffea canephora HOM05D008121 ORTHO05D009878 1.1e-13 80.5 145 42.1
Rhsim08G0185200 Rhododendron simsii HOM05D000290 ORTHO05D004630 3.3e-13 79.0 141 43.3
Dinv02922 Davidia involucrata HOM05D008121 ORTHO05D009878 5.7e-13 78.2 150 46.7
vmacro19236 Vaccinium macrocarpon HOM05D008121 ORTHO05D009878 1.3e-12 77.0 139 38.8
SalBow5G0592 Salvia bowleyana HOM05D040652 ORTHO05D036958 2.2e-12 76.3 111 51.4
Actinidia25609 Actinidia chinensis HOM05D008121 ORTHO05D009878 6.3e-12 74.7 144 42.4
Cpa.g.sc4.77 Carica papaya HOM05D008121 ORTHO05D009878 6.3e-12 74.7 151 39.7
SalBow5G2921 Salvia bowleyana HOM05D040652 ORTHO05D036958 2.4e-11 72.8 111 49.5
FAN08G2628 Fragaria x ananassa HOM05D000290 ORTHO05D004630 3.1e-11 72.4 159 38.4
unitig_8.g4185 Utricularia gibba HOM05D000357 ORTHO05D009878 5.3e-11 71.6 79 51.9
FvH4_5g07590 Fragaria vesca HOM05D008121 ORTHO05D009878 9.1e-11 70.9 167 39.5
RcHm_v2.0_Chr7g0190901 Rosa chinensis HOM05D008121 ORTHO05D009878 1.2e-10 70.5 167 37.7
Sabra15G0113100 Salix brachista HOM05D000290 ORTHO05D004630 1.6e-10 70.1 147 39.5
HanXRQChr09g0272891 Helianthus annuus HOM05D008121 ORTHO05D009878 3.5e-10 68.9 147 38.1
DCAR_026211 Daucus carota HOM05D008121 ORTHO05D009878 5.9e-10 68.2 145 38.6
Duzib084G1233 Durio zibethinus HOM05D008121 ORTHO05D009878 5.9e-10 68.2 140 41.4
Atru.chr9.1017 Acer truncatum HOM05D008121 ORTHO05D009878 7.7e-10 67.8 142 40.1
Prupe.5G156300 Prunus persica HOM05D008121 ORTHO05D009878 1.3e-09 67.0 170 38.8
GSVIVG01007536001 Vitis vinifera HOM05D008121 ORTHO05D009878 1.3e-09 67.0 168 35.1
Potri.015G091100 Populus trichocarpa HOM05D008121 ORTHO05D009878 1.7e-09 66.6 169 36.7
AUR62001288 Chenopodium quinoa HOM05D008121 ORTHO05D009878 2.9e-09 65.9 148 39.2
TWI14G0571 Tripterygium wilfordii HOM05D008121 ORTHO05D009878 3.8e-09 65.5 175 35.4
FAN04G1418 Fragaria x ananassa HOM05D000290 ORTHO05D004630 5.0e-09 65.1 162 35.8
CiPaw.12G036100 Carya illinoinensis HOM05D008121 ORTHO05D009878 6.5e-09 64.7 155 36.8
Gohir.D09G246100 Gossypium hirsutum HOM05D008121 ORTHO05D009878 8.5e-09 64.3 145 37.9
CiPaw.11G011700 Carya illinoinensis HOM05D008121 ORTHO05D009878 1.1e-08 63.9 136 37.5
Gorai.006G270600 Gossypium raimondii HOM05D008121 ORTHO05D009878 1.1e-08 63.9 145 37.9
MD06G1149100 Malus domestica HOM05D008121 ORTHO05D009878 1.1e-08 63.9 173 35.8
EL10Ac7g18085 Beta vulgaris HOM05D008121 ORTHO05D009878 7.2e-08 61.2 144 38.2
Manes.14G055100 Manihot esculenta HOM05D008121 ORTHO05D009878 1.2e-07 60.5 171 35.1
COL.COLO4_03517 Corchorus olitorius HOM05D008121 ORTHO05D009878 1.6e-07 60.1 154 40.3
Oeu045478.1 Olea europaea HOM05D040652 ORTHO05D036958 2.7e-07 59.3 120 41.7
Haze_07274 Corylus avellana HOM05D008121 ORTHO05D009878 4.7e-07 58.5 163 35.0
QL10p005006 Quercus lobata HOM05D008121 ORTHO05D009878 1.0e-06 57.4 142 35.2
Duzib205G1258 Durio zibethinus HOM05D008121 ORTHO05D009878 1.4e-06 57.0 170 35.9
Gohir.A09G245200 Gossypium hirsutum HOM05D008121 ORTHO05D009878 1.8e-06 56.6 144 37.5
Thecc.03G123300 Theobroma cacao HOM05D008121 ORTHO05D009878 3.0e-06 55.8 170 38.2
AL5G27920 Arabidopsis lyrata HOM05D011481 ORTHO05D009878 6.7e-06 54.7 108 37.0
Glyma.17G127300 Glycine max HOM05D008121 ORTHO05D009878 6.7e-06 54.7 148 35.8


User provided reference genes

Program Settings