Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold161G37817 Striga asiatica HOM05D006852 ORTHO05D008585 1.6e-115 419.5 215 100.0
CAN.G857.11 Capsicum annuum HOM05D006852 ORTHO05D008585 2.2e-69 266.2 235 61.3
Solyc04g074660.3 Solanum lycopersicum HOM05D006852 ORTHO05D008585 9.4e-68 260.8 226 61.1
PGSC0003DMG400030817 Solanum tuberosum HOM05D006852 ORTHO05D008585 2.7e-67 259.2 225 60.9
Peaxi162Scf00339g00115 Petunia axillaris HOM05D006852 ORTHO05D008585 3.6e-67 258.8 221 60.6
Sopen04g029630 Solanum pennellii HOM05D006852 ORTHO05D008585 1.4e-66 256.9 221 61.5
Thecc.01G410400 Theobroma cacao HOM05D006852 ORTHO05D008585 1.2e-65 253.8 197 66.5
COL.COLO4_31169 Corchorus olitorius HOM05D006852 ORTHO05D008585 2.0e-65 253.1 201 64.7
Nitab4.5_0000125g0260 Nicotiana tabacum HOM05D006852 ORTHO05D008585 2.0e-65 253.1 196 65.3
Nitab4.5_0006579g0050 Nicotiana tabacum HOM05D006852 ORTHO05D008585 2.0e-65 253.1 196 65.3
Eucgr.G03378 Eucalyptus grandis HOM05D006852 ORTHO05D008585 4.4e-65 251.9 240 58.8
Glyma.12G236900 Glycine max HOM05D006852 ORTHO05D008585 7.5e-65 251.1 202 64.4
Potri.001G266200 Populus trichocarpa HOM05D006852 ORTHO05D008585 7.5e-65 251.1 235 57.0
Atru.chr11.2623 Acer truncatum HOM05D006852 ORTHO05D008585 1.3e-64 250.4 235 58.7
Dinv09352 Davidia involucrata HOM05D006852 ORTHO05D008585 1.3e-64 250.4 234 60.3
FvH4_7g01110 Fragaria vesca HOM05D006852 ORTHO05D008585 1.3e-64 250.4 201 64.2
Glyma.13G202400 Glycine max HOM05D006852 ORTHO05D008585 1.7e-64 250.0 199 64.8
Gohir.A08G144200 Gossypium hirsutum HOM05D006852 ORTHO05D008585 1.7e-64 250.0 198 64.6
FAN06G4754 Fragaria x ananassa HOM05D006852 ORTHO05D008585 2.2e-64 249.6 203 63.5
Nn7g36210 Nelumbo nucifera HOM05D006852 ORTHO05D008585 2.8e-64 249.2 199 65.3
Lj3g0018236 Lotus japonicus HOM05D006852 ORTHO05D008585 6.3e-64 248.1 197 64.5
RcHm_v2.0_Chr1g0316111 Rosa chinensis HOM05D006852 ORTHO05D008585 1.1e-63 247.3 197 65.0
arahy.Tifrunner.gnm1.ann1.5TR8MX Arachis hypogaea HOM05D006852 ORTHO05D008585 1.8e-63 246.5 223 59.6
Phvul.011G211400 Phaseolus vulgaris HOM05D006852 ORTHO05D008585 1.8e-63 246.5 197 64.5
ATR0332G098 Amborella trichopoda HOM05D006852 ORTHO05D008585 3.1e-63 245.7 200 64.5
Gorai.004G172200 Gossypium raimondii HOM05D006852 ORTHO05D008585 5.4e-63 245.0 195 64.6
Manes.07G006500 Manihot esculenta HOM05D006852 ORTHO05D008585 5.4e-63 245.0 197 64.5
Hma1.2p1_0293F.1_g116040 Hydrangea macrophylla HOM05D006852 ORTHO05D008585 9.2e-63 244.2 220 58.2
Cfa010769 Carpinus fangiana HOM05D006852 ORTHO05D008585 1.6e-62 243.4 233 59.2
Prupe.2G014400 Prunus persica HOM05D006852 ORTHO05D008585 1.6e-62 243.4 197 64.0
Gohir.D08G165200 Gossypium hirsutum HOM05D006852 ORTHO05D008585 3.5e-62 242.3 195 64.1
BcaNung00310 Brassica carinata HOM05D006852 ORTHO05D008585 4.5e-62 241.9 200 63.5
Duzib138G0005 Durio zibethinus HOM05D006852 ORTHO05D008585 4.5e-62 241.9 235 59.1
Oeu010800.1 Olea europaea HOM05D006852 ORTHO05D008585 4.5e-62 241.9 185 67.0
Actinidia31067 Actinidia chinensis HOM05D006852 ORTHO05D008585 5.9e-62 241.5 196 64.8
AT4G15030 Arabidopsis thaliana HOM05D006852 ORTHO05D008585 5.9e-62 241.5 200 63.5
EL10Ac2g04333 Beta vulgaris HOM05D006852 ORTHO05D008585 5.9e-62 241.5 220 57.3
AL7G40800 Arabidopsis lyrata HOM05D006852 ORTHO05D008585 7.7e-62 241.1 200 63.5
CARHR221730 Cardamine hirsuta HOM05D006852 ORTHO05D008585 7.7e-62 241.1 197 64.0
Lalb_Chr03g0034091 Lupinus albus HOM05D006852 ORTHO05D008585 7.7e-62 241.1 197 63.5
Sp7g13213 Schrenkiella parvula HOM05D006852 ORTHO05D008585 7.7e-62 241.1 200 63.0
Sed0010309 Sechium edule HOM05D006852 ORTHO05D008585 1.0e-61 240.7 199 61.8
Thhalv10026084m.g Eutrema salsugineum HOM05D006852 ORTHO05D008585 1.3e-61 240.4 200 63.0
MD07G1011200 Malus domestica HOM05D006852 ORTHO05D008585 1.3e-61 240.4 198 63.1
A01p22510 Brassica napus HOM05D006852 ORTHO05D008585 1.7e-61 240.0 200 62.5
C01p28040 Brassica napus HOM05D006852 ORTHO05D008585 1.7e-61 240.0 200 62.5
BraA01t02166Z Brassica rapa HOM05D006852 ORTHO05D008585 2.3e-61 239.6 231 57.1
MELO3C023552.2 Cucumis melo HOM05D006852 ORTHO05D008585 2.9e-61 239.2 196 62.2
Carub.0007s2707 Capsella rubella HOM05D006852 ORTHO05D008585 6.6e-61 238.0 200 63.0
PSO384G4724 Papaver somniferum HOM05D006852 ORTHO05D008585 6.6e-61 238.0 230 57.0
PGR031G2977 Punica granatum HOM05D006852 ORTHO05D008585 1.1e-60 237.3 195 63.1
TWI79G0862 Tripterygium wilfordii HOM05D006852 ORTHO05D008585 1.1e-60 237.3 202 61.4
ECA248G0614 Erigeron canadensis HOM05D006852 ORTHO05D008585 1.9e-60 236.5 241 56.8
Psat4g148920 Pisum sativum HOM05D006852 ORTHO05D008585 1.9e-60 236.5 198 62.6
BolC1t02738H Brassica oleracea HOM05D006852 ORTHO05D008585 2.5e-60 236.1 200 61.5
BcaC09g50182 Brassica carinata HOM05D006852 ORTHO05D008585 3.3e-60 235.7 204 60.8
CiPaw.14G000200 Carya illinoinensis HOM05D006852 ORTHO05D008585 3.3e-60 235.7 234 58.1
Rhsim07G0056000 Rhododendron simsii HOM05D006852 ORTHO05D008585 3.3e-60 235.7 190 64.7
PSO339G6046 Papaver somniferum HOM05D006852 ORTHO05D008585 4.3e-60 235.3 230 56.1
CANSAT80G1911 Cannabis sativa HOM05D006852 ORTHO05D008585 9.5e-60 234.2 195 62.6
AUR62023069 Chenopodium quinoa HOM05D006852 ORTHO05D008585 9.5e-60 234.2 255 54.1
HanXRQChr01g0015721 Helianthus annuus HOM05D006852 ORTHO05D008585 2.8e-59 232.6 241 56.0
Medtr8g037265 Medicago truncatula HOM05D006852 ORTHO05D008585 3.6e-59 232.3 198 62.1
CsaV3_7G031040 Cucumis sativus L. HOM05D006852 ORTHO05D008585 4.7e-59 231.9 207 58.9
Aqoxy1G00289 Aquilegia oxysepala HOM05D006852 ORTHO05D008585 6.1e-59 231.5 200 60.5
Ciclev10032186m.g Citrus clementina HOM05D006852 ORTHO05D008585 1.8e-58 229.9 234 57.3
Lsat_1_v5_gn_1_106940 Lactuca sativa HOM05D006852 ORTHO05D008585 1.8e-58 229.9 231 58.9
FAN10G4066 Fragaria x ananassa HOM05D006852 ORTHO05D008585 2.3e-58 229.6 187 64.2
THA.LOC104801980 Tarenaya hassleriana HOM05D006852 ORTHO05D008585 2.3e-58 229.6 220 56.8
FAN01G0182 Fragaria x ananassa HOM05D006852 ORTHO05D008585 3.0e-58 229.2 186 64.5
unitig_747.g22049 Utricularia gibba HOM05D006852 ORTHO05D008585 6.8e-58 228.0 198 60.1
MBI04_g36071_MAGBIO Magnolia biondii HOM05D006852 ORTHO05D008585 3.4e-57 225.7 213 60.6
ClCG09G004140 Citrullus lanatus HOM05D006852 ORTHO05D008585 1.3e-56 223.8 185 61.6
vmacro13669 Vaccinium macrocarpon HOM05D006852 ORTHO05D008585 3.7e-56 222.2 288 49.3
Aa31LG9G2320 Aethionema arabicum HOM05D006852 ORTHO05D008585 6.4e-56 221.5 227 53.7
QL04p006320 Quercus lobata HOM05D006852 ORTHO05D008585 1.8e-55 219.9 266 51.1
SEGI_37436 Sequoiadendron giganteum HOM05D006852 ORTHO05D008585 1.8e-55 219.9 244 53.3
Zm00001eb115340 Zea mays HOM05D006852 ORTHO05D008585 1.8e-55 219.9 196 57.7
HPP92_009588 Vanilla planifolia HOM05D006852 ORTHO05D008585 3.2e-55 219.2 205 55.6
FAN03G0769 Fragaria x ananassa HOM05D006852 ORTHO05D008585 2.0e-54 216.5 286 47.6
Cc02_g28030 Coffea canephora HOM05D006852 ORTHO05D008585 1.0e-53 214.2 138 73.2
Sc10g0000090 Simmondsia chinensis HOM05D006852 ORTHO05D008585 3.0e-53 212.6 227 54.6
SHI04066 Sapria himalayana HOM05D006852 ORTHO05D008585 1.5e-52 210.3 172 64.5
VMungo1127G1814 Vigna mungo HOM05D006852 ORTHO05D008585 3.3e-52 209.1 138 72.5
Os11g0639000 Oryza sativa ssp. japonica HOM05D006852 ORTHO05D008585 1.2e-51 207.2 186 57.5
Ah.10g038820 Amaranthus hybridus HOM05D006852 ORTHO05D008585 2.8e-51 206.1 229 50.2
Sabra16G0163300 Salix brachista HOM05D006852 ORTHO05D008585 4.7e-51 205.3 257 47.9
SalBow6G3774 Salvia bowleyana HOM05D006852 ORTHO05D008585 1.8e-50 203.4 143 69.9
Hund18974 Selenicereus undatus HOM05D006852 ORTHO05D008585 4.0e-50 202.2 309 41.4
Hma1.2p1_0293F.1_g116050 Hydrangea macrophylla HOM05D006852 ORTHO05D008585 1.3e-48 197.2 138 67.4
TAR633G0701 Trochodendron aralioides HOM05D006852 ORTHO05D008585 2.2e-48 196.4 190 57.4
AUR62009387 Chenopodium quinoa HOM05D006852 ORTHO05D008585 4.9e-48 195.3 236 48.3
TPR.G1866 Trifolium pratense HOM05D006852 ORTHO05D008585 1.9e-47 193.4 139 67.6
Oeu049501.1 Olea europaea HOM05D006852 ORTHO05D008585 3.2e-47 192.6 130 71.5
Haze_03202 Corylus avellana HOM05D006852 ORTHO05D008585 5.4e-47 191.8 166 60.2
Mapoly0009s0102 Marchantia polymorpha HOM05D006852 ORTHO05D008585 1.6e-46 190.3 197 51.8
SalBow6G4338 Salvia bowleyana HOM05D006852 ORTHO05D008585 3.5e-46 189.1 209 50.7
Pp3c2_10540 Physcomitrium patens HOM05D006852 ORTHO05D008585 4.6e-46 188.7 216 49.5
AagrBONN_evm.TU.Sc2ySwM_228.2602 Anthoceros agrestis HOM05D006852 ORTHO05D008585 2.8e-43 179.5 237 46.4
Migut.N01601 Erythranthe guttata HOM05D006852 ORTHO05D008585 4.9e-40 168.7 115 71.3
CSS0037243 Camellia sinensis var. sinensis HOM05D006852 ORTHO05D008585 1.9e-39 166.8 208 50.0
CSS0019030 Camellia sinensis var. sinensis HOM05D006852 ORTHO05D008585 5.4e-39 165.2 207 49.8
arahy.Tifrunner.gnm1.ann1.2WG9D2 Arachis hypogaea HOM05D006852 ORTHO05D008585 8.9e-34 147.9 386 31.1
Cre07.g336250 Chlamydomonas reinhardtii HOM05D006852 ORTHO05D008585 5.8e-33 145.2 207 41.5
GSVIVG01032100001 Vitis vinifera HOM05D006852 ORTHO05D008585 1.0e-29 134.4 102 68.6
CDE02G4017 Ceratophyllum demersum HOM05D006852 ORTHO05D008585 4.3e-28 129.0 98 63.3
MD02G1310300 Malus domestica HOM05D006852 ORTHO05D008585 8.1e-27 124.8 105 60.0
SMO239G0058 Selaginella moellendorffii HOM05D006852 ORTHO05D008585 6.4e-24 115.2 99 59.6
CBR_g4609 Chara braunii HOM05D006852 ORTHO05D008585 5.4e-23 112.1 125 48.0
CDE02G1038 Ceratophyllum demersum HOM05D005011 ORTHO05D006443 1.5e-09 67.4 49 67.3
Migut.N01602 Erythranthe guttata HOM05D006852 ORTHO05D008585 2.6e-09 66.6 34 91.2
C03p92530 Brassica napus HOM05D006852 ORTHO05D008585 1.7e-08 63.9 39 76.9
Cc02_g28050 Coffea canephora HOM05D006852 ORTHO05D008585 8.4e-08 61.6 57 57.9
QL11p002055 Quercus lobata HOM05D006852 ORTHO05D008585 1.4e-07 60.8 40 75.0
QL11p002033 Quercus lobata HOM05D006852 ORTHO05D008585 1.9e-07 60.5 148 37.8
Ca_23889_v3 Cicer arietinum L. HOM05D006852 ORTHO05D008585 3.2e-07 59.7 29 89.7


User provided reference genes

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