Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold161G37792 Striga asiatica HOM05D013081 ORTHO05D010903 0.0e+00 1175.2 587 100.0
SGA_v2.0_scaffold184G40021 Striga asiatica HOM05D013081 ORTHO05D010903 1.5e-70 271.6 248 61.3
EL10Ac5g12667 Beta vulgaris HOM05D013081 ORTHO05D010903 3.4e-46 190.7 369 33.6
EL10Ac4g09643 Beta vulgaris HOM05D013081 ORTHO05D010903 7.7e-46 189.5 399 32.6
AUR62025887 Chenopodium quinoa HOM05D013081 ORTHO05D010903 2.7e-43 181.0 355 32.1
EL10Ac9g21162 Beta vulgaris HOM05D013081 ORTHO05D010903 1.3e-40 172.2 371 30.7
SGA_v2.0_scaffold43G16295 Striga asiatica HOM05D000694 ORTHO05D000530 1.4e-39 168.7 104 78.8
AUR62016889 Chenopodium quinoa HOM05D013081 ORTHO05D010903 1.1e-31 142.5 251 37.5
Psat4g183920 Pisum sativum HOM05D010975 ORTHO05D010903 2.4e-23 114.8 301 29.6
AUR62008922 Chenopodium quinoa HOM05D013081 ORTHO05D010903 4.1e-23 114.0 250 33.6
Psat0s3719g0240 Pisum sativum HOM05D010975 ORTHO05D010903 1.6e-22 112.1 284 29.2
DCAR_010389 Daucus carota HOM05D025501 ORTHO05D010903 2.0e-22 111.7 310 29.4
DCAR_011104 Daucus carota HOM05D010975 ORTHO05D010903 2.5e-20 104.8 234 32.9
TPR.G16670 Trifolium pratense HOM05D006122 ORTHO05D007426 1.4e-18 99.0 328 27.7
DCAR_010390 Daucus carota HOM05D025501 ORTHO05D010903 2.0e-17 95.1 204 34.8
AUR62014770 Chenopodium quinoa HOM05D013081 ORTHO05D010903 4.8e-16 90.5 226 30.1
EL10Ac4g09371 Beta vulgaris HOM05D010975 ORTHO05D010903 1.8e-15 88.6 368 27.4
AUR62025882 Chenopodium quinoa HOM05D013081 ORTHO05D010903 4.1e-15 87.4 142 35.9
EL10Ac8g19026 Beta vulgaris HOM05D010975 ORTHO05D010903 5.9e-14 83.6 361 26.6
DCAR_017628 Daucus carota HOM05D010975 ORTHO05D010903 1.0e-13 82.8 203 29.6
TPR.G22874 Trifolium pratense HOM05D010975 ORTHO05D010903 8.5e-13 79.7 176 33.5
Psat0s3719g0280 Pisum sativum HOM05D010975 ORTHO05D010903 7.2e-12 76.6 198 28.3
SalBow6G5927 Salvia bowleyana HOM05D010975 ORTHO05D010903 9.4e-12 76.3 152 32.2
GSVIVG01006780001 Vitis vinifera HOM05D000176 ORTHO05D000106 9.4e-12 76.3 346 25.4
MD10G1009900 Malus domestica HOM05D000176 ORTHO05D000106 1.2e-11 75.9 393 24.2
EL10Ac8g19025 Beta vulgaris HOM05D010975 ORTHO05D010903 2.7e-11 74.7 357 25.2
Ciclev10025397m.g Citrus clementina HOM05D000176 ORTHO05D000106 2.7e-11 74.7 342 25.4
AUR62004793 Chenopodium quinoa HOM05D013081 ORTHO05D010903 1.4e-10 72.4 101 33.7
Prupe.8G014000 Prunus persica HOM05D000176 ORTHO05D000106 3.0e-10 71.2 340 24.7
GSVIVG01017117001 Vitis vinifera HOM05D000176 ORTHO05D003511 6.8e-10 70.1 343 25.4
EL10Ac2g04322 Beta vulgaris HOM05D010975 ORTHO05D010903 8.8e-10 69.7 396 24.5
QL01p018788 Quercus lobata HOM05D000176 ORTHO05D000106 1.2e-09 69.3 376 24.7
EL10Ac4g09372 Beta vulgaris HOM05D010975 ORTHO05D010903 3.4e-09 67.8 249 27.7
Atru.chr6.3553_Atru.chr6.3554 Acer truncatum HOM05D000176 ORTHO05D000106 2.8e-08 64.7 342 26.0
Oeu063771.2 Olea europaea HOM05D000176 ORTHO05D000106 3.7e-08 64.3 170 31.2
Rhsim06G0121800 Rhododendron simsii HOM05D000176 ORTHO05D000106 3.7e-08 64.3 170 30.6
SalBow6G7226 Salvia bowleyana HOM05D010975 ORTHO05D010903 3.7e-08 64.3 221 26.2
Sopen05g034420 Solanum pennellii HOM05D000176 ORTHO05D000106 4.8e-08 63.9 170 30.0
Migut.K00126 Erythranthe guttata HOM05D000176 ORTHO05D000106 6.3e-08 63.5 170 30.6
AUR62025883 Chenopodium quinoa HOM05D010975 ORTHO05D010903 8.3e-08 63.2 131 32.1
AUR62025886 Chenopodium quinoa HOM05D010975 ORTHO05D010903 8.3e-08 63.2 130 31.5
HanXRQChr09g0246821 Helianthus annuus HOM05D000176 ORTHO05D000106 8.3e-08 63.2 347 25.1
Solyc05g056010.3 Solanum lycopersicum HOM05D000176 ORTHO05D000106 8.3e-08 63.2 170 30.0
Peaxi162Scf00384g01218 Petunia axillaris HOM05D000176 ORTHO05D000106 1.1e-07 62.8 346 22.3
PGSC0003DMG400023346 Solanum tuberosum HOM05D000176 ORTHO05D000106 1.1e-07 62.8 170 30.0
VMungo0540G2186 Vigna mungo HOM05D000176 ORTHO05D000106 1.1e-07 62.8 344 24.7
Lalb_Chr20g0114151 Lupinus albus HOM05D000176 ORTHO05D000106 1.4e-07 62.4 349 24.1
PGR042G1331 Punica granatum HOM05D000176 ORTHO05D000106 1.4e-07 62.4 343 23.6
QL08p043592 Quercus lobata HOM05D000176 ORTHO05D000106 1.4e-07 62.4 346 24.6
EL10Ac2g04324 Beta vulgaris HOM05D010975 ORTHO05D010903 1.8e-07 62.0 259 26.3
C03p55310 Brassica napus HOM05D000176 ORTHO05D000106 1.8e-07 62.0 338 24.0
BolC3t17803H Brassica oleracea HOM05D000176 ORTHO05D000106 1.8e-07 62.0 338 24.0
Ca_14624_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 1.8e-07 62.0 344 24.7
Nitab4.5_0000476g0120 Nicotiana tabacum HOM05D000176 ORTHO05D000106 2.4e-07 61.6 342 23.1
Ah.16g107440 Amaranthus hybridus HOM05D000176 ORTHO05D000106 3.1e-07 61.2 312 24.7
arahy.Tifrunner.gnm1.ann1.B0WW5W Arachis hypogaea HOM05D000176 ORTHO05D000106 3.1e-07 61.2 343 23.9
Duzib138G0102 Durio zibethinus HOM05D000176 ORTHO05D000106 3.1e-07 61.2 307 25.4
Gorai.001G193000 Gossypium raimondii HOM05D000176 ORTHO05D000106 4.1e-07 60.8 303 25.4
Lj6g0005713 Lotus japonicus HOM05D000176 ORTHO05D000106 4.1e-07 60.8 343 24.2
MD09G1156100 Malus domestica HOM05D000176 ORTHO05D000106 4.1e-07 60.8 347 23.6
EL10As19g24186 Beta vulgaris HOM05D000176 ORTHO05D000106 5.4e-07 60.5 256 27.3
A03p44500 Brassica napus HOM05D000176 ORTHO05D000106 5.4e-07 60.5 338 24.0
BraA03t13583Z Brassica rapa HOM05D000176 ORTHO05D000106 5.4e-07 60.5 338 24.0
CSS0028049 Camellia sinensis var. sinensis HOM05D001875 ORTHO05D000106 5.4e-07 60.5 170 30.6
CSS0045164 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 5.4e-07 60.5 170 30.6
FvH4_6g37771 Fragaria vesca HOM05D000176 ORTHO05D000106 5.4e-07 60.5 351 23.1
MSTRG.10797 Avicennia marina HOM05D000176 ORTHO05D000106 7.0e-07 60.1 170 30.0
RcHm_v2.0_Chr2g0150841 Rosa chinensis HOM05D000176 ORTHO05D000106 7.0e-07 60.1 351 23.9
Actinidia11188 Actinidia chinensis HOM05D000176 ORTHO05D000106 9.1e-07 59.7 170 29.4
arahy.Tifrunner.gnm1.ann1.ZG7XLL Arachis hypogaea HOM05D000176 ORTHO05D000106 9.1e-07 59.7 342 24.0
AUR62022514 Chenopodium quinoa HOM05D000176 ORTHO05D000106 9.1e-07 59.7 257 26.8
Eucgr.A01958 Eucalyptus grandis HOM05D000176 ORTHO05D000106 9.1e-07 59.7 345 23.5
Prupe.3G169000 Prunus persica HOM05D000176 ORTHO05D000106 9.1e-07 59.7 347 24.2
AUR62038386 Chenopodium quinoa HOM05D000176 ORTHO05D000106 1.2e-06 59.3 258 26.7
AUR62038389 Chenopodium quinoa HOM05D000176 ORTHO05D000106 1.2e-06 59.3 258 26.7
Duzib211G0089 Durio zibethinus HOM05D000176 ORTHO05D000106 1.2e-06 59.3 308 26.0
CANSAT56G1843 Cannabis sativa HOM05D000176 ORTHO05D000106 1.6e-06 58.9 313 24.6
Prupe.4G252400 Prunus persica HOM05D000176 ORTHO05D000106 2.0e-06 58.5 313 24.3
Ciclev10014335m.g Citrus clementina HOM05D000176 ORTHO05D000106 2.7e-06 58.2 170 29.4
Lsat_1_v5_gn_7_67341 Lactuca sativa HOM05D000176 ORTHO05D000106 2.7e-06 58.2 349 24.6
MD17G1142300 Malus domestica HOM05D000176 ORTHO05D000106 2.7e-06 58.2 342 22.8
Lalb_Chr15g0080531 Lupinus albus HOM05D000176 ORTHO05D000106 4.5e-06 57.4 255 27.1
Sp3g23470 Schrenkiella parvula HOM05D000176 ORTHO05D000106 4.5e-06 57.4 338 24.0
SEGI_11295 Sequoiadendron giganteum HOM05D000093 ORTHO05D000814 4.5e-06 57.4 152 28.3
THA.LOC104808853 Tarenaya hassleriana HOM05D000176 ORTHO05D000106 4.5e-06 57.4 338 24.0
Cc03_g14530 Coffea canephora HOM05D000176 ORTHO05D000106 5.9e-06 57.0 170 29.4
Dinv18200 Davidia involucrata HOM05D000176 ORTHO05D000106 5.9e-06 57.0 349 22.3
Aa31sc575G20 Aethionema arabicum HOM05D000176 ORTHO05D000106 7.7e-06 56.6 334 22.8
MD09G1191600 Malus domestica HOM05D000176 ORTHO05D000106 7.7e-06 56.6 314 23.2


User provided reference genes

Program Settings