Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold15G07489 Striga asiatica HOM05D008250 ORTHO05D010361 5.9e-55 217.2 106 100.0
Actinidia16414 Actinidia chinensis HOM05D008250 ORTHO05D010361 1.5e-10 69.7 40 85.0
Hma1.2p1_1760F.1_g301220 Hydrangea macrophylla HOM05D008250 ORTHO05D010361 4.4e-10 68.2 36 86.1
Manes.12G117000 Manihot esculenta HOM05D008250 ORTHO05D010361 5.8e-10 67.8 36 83.3
COL.COLO4_11607 Corchorus olitorius HOM05D008250 ORTHO05D010361 9.9e-10 67.0 36 80.6
GSVIVG01002948001 Vitis vinifera HOM05D008250 ORTHO05D010361 1.7e-09 66.2 36 83.3
GSVIVG01004436001 Vitis vinifera HOM05D008250 ORTHO05D010361 1.7e-09 66.2 36 83.3
Gohir.A12G078200 Gossypium hirsutum HOM05D008250 ORTHO05D010361 2.2e-09 65.9 36 80.6
Gohir.D12G076400 Gossypium hirsutum HOM05D008250 ORTHO05D010361 2.9e-09 65.5 36 77.8
Gorai.008G085000 Gossypium raimondii HOM05D008250 ORTHO05D010361 2.9e-09 65.5 36 77.8
Lsat_1_v5_gn_4_159680 Lactuca sativa HOM05D008250 ORTHO05D010361 2.9e-09 65.5 36 77.8
Thecc.01G075500 Theobroma cacao HOM05D008250 ORTHO05D010361 2.9e-09 65.5 34 85.3
Atru.chr3.1053 Acer truncatum HOM05D008250 ORTHO05D010361 3.8e-09 65.1 36 80.6
Potri.007G006700 Populus trichocarpa HOM05D008250 ORTHO05D010361 4.9e-09 64.7 36 80.6
ClCG02G012200 Citrullus lanatus HOM05D008250 ORTHO05D010361 6.4e-09 64.3 36 80.6
Ciclev10026916m.g Citrus clementina HOM05D008250 ORTHO05D010361 6.4e-09 64.3 36 77.8
CsaV3_2G016360 Cucumis sativus L. HOM05D008250 ORTHO05D010361 6.4e-09 64.3 34 85.3
Sc03g0002500 Simmondsia chinensis HOM05D008250 ORTHO05D010361 6.4e-09 64.3 36 77.8
Haze_15258 Corylus avellana HOM05D008250 ORTHO05D010361 1.1e-08 63.5 35 82.9
Sed0009961 Sechium edule HOM05D008250 ORTHO05D010361 1.4e-08 63.2 36 75.0
CSS0002791 Camellia sinensis var. sinensis HOM05D008250 ORTHO05D010361 1.9e-08 62.8 35 80.0
CSS0014718 Camellia sinensis var. sinensis HOM05D008250 ORTHO05D010361 1.9e-08 62.8 35 80.0
Phvul.003G233500 Phaseolus vulgaris HOM05D008250 ORTHO05D010361 1.9e-08 62.8 38 81.6
MD02G1189100 Malus domestica HOM05D008250 ORTHO05D010361 2.4e-08 62.4 36 77.8
Nn6g34516 Nelumbo nucifera HOM05D008250 ORTHO05D010361 2.4e-08 62.4 36 80.6
Rhsim08G0091900 Rhododendron simsii HOM05D008250 ORTHO05D010361 3.2e-08 62.0 35 77.1
HanXRQChr09g0255361 Helianthus annuus HOM05D008250 ORTHO05D010361 4.1e-08 61.6 36 75.0
Solyc02g092130.2 Solanum lycopersicum HOM05D008250 ORTHO05D010361 5.4e-08 61.2 37 83.8
TWI74G1530 Tripterygium wilfordii HOM05D008250 ORTHO05D010361 7.1e-08 60.8 36 75.0
Aa31LG1G16230 Aethionema arabicum HOM05D008250 ORTHO05D010361 1.2e-07 60.1 31 83.9
Aqoxy6G02462 Aquilegia oxysepala HOM05D008250 ORTHO05D010361 1.6e-07 59.7 89 40.4
PGSC0003DMG400021408 Solanum tuberosum HOM05D008250 ORTHO05D010361 1.6e-07 59.7 37 81.1
CiPaw.01G002500 Carya illinoinensis HOM05D008250 ORTHO05D010361 2.1e-07 59.3 37 78.4
Thhalv10005252m.g Eutrema salsugineum HOM05D008250 ORTHO05D010361 2.7e-07 58.9 31 83.9
RcHm_v2.0_Chr2g0108561 Rosa chinensis HOM05D008250 ORTHO05D010361 2.7e-07 58.9 36 72.2
BcaB02g09904 Brassica carinata HOM05D008250 ORTHO05D010361 7.8e-07 57.4 31 80.6
BcaC01g02825 Brassica carinata HOM05D008250 ORTHO05D010361 7.8e-07 57.4 31 80.6
A06p32730 Brassica napus HOM05D008250 ORTHO05D010361 7.8e-07 57.4 30 83.3
BraA06t26203Z Brassica rapa HOM05D008250 ORTHO05D010361 7.8e-07 57.4 31 80.6
C03p59760 Brassica napus HOM05D008250 ORTHO05D010361 5.1e-06 54.7 31 77.4
C03p59770 Brassica napus HOM05D008250 ORTHO05D010361 5.1e-06 54.7 31 77.4
BolC3t18239H Brassica oleracea HOM05D008250 ORTHO05D010361 5.1e-06 54.7 31 77.4
BolC3t18240H Brassica oleracea HOM05D008250 ORTHO05D010361 5.1e-06 54.7 31 77.4
Migut.H00327 Erythranthe guttata HOM05D008250 ORTHO05D010361 5.1e-06 54.7 44 63.6


User provided reference genes

Program Settings