Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold15G07476 Striga asiatica HOM05D001896 ORTHO05D001862 3.6e-77 291.6 155 100.0
Migut.H00334 Erythranthe guttata HOM05D001896 ORTHO05D001862 1.3e-23 113.6 167 47.9
Rhsim08G0092500 Rhododendron simsii HOM05D001896 ORTHO05D001862 2.3e-15 86.3 153 39.9
MD15G1299400 Malus domestica HOM05D001896 ORTHO05D001862 3.9e-15 85.5 153 40.5
Prupe.6G218500 Prunus persica HOM05D001896 ORTHO05D001862 8.7e-15 84.3 155 38.1
Nitab4.5_0003129g0070 Nicotiana tabacum HOM05D001896 ORTHO05D001862 4.3e-14 82.0 154 35.7
Oeu013335.1 Olea europaea HOM05D001896 ORTHO05D001862 4.3e-14 82.0 150 40.7
Nitab4.5_0003129g0080 Nicotiana tabacum HOM05D001896 ORTHO05D001862 5.7e-14 81.6 132 40.9
COL.COLO4_11600 Corchorus olitorius HOM05D001896 ORTHO05D001862 9.7e-14 80.9 152 39.5
Thecc.01G074600 Theobroma cacao HOM05D001896 ORTHO05D001862 1.6e-13 80.1 149 38.9
CiPaw.02G001600 Carya illinoinensis HOM05D001896 ORTHO05D001862 2.2e-13 79.7 156 38.5
SalBow3G3940 Salvia bowleyana HOM05D037187 ORTHO05D001862 2.8e-13 79.3 113 45.1
TAR381G1204 Trochodendron aralioides HOM05D001896 ORTHO05D001862 2.8e-13 79.3 148 40.5
Duzib264G0605 Durio zibethinus HOM05D001896 ORTHO05D001862 3.7e-13 79.0 148 37.2
Lj4P164T35 Lonicera japonica HOM05D001896 ORTHO05D001862 3.7e-13 79.0 149 36.9
Duzib147G1417 Durio zibethinus HOM05D001896 ORTHO05D001862 4.8e-13 78.6 149 38.9
Migut.L00422 Erythranthe guttata HOM05D001896 ORTHO05D001862 6.3e-13 78.2 157 41.4
MD02G1188200 Malus domestica HOM05D001896 ORTHO05D001862 6.3e-13 78.2 153 39.2
Oeu021445.1 Olea europaea HOM05D001896 ORTHO05D001862 6.3e-13 78.2 151 41.1
Nitab4.5_0000142g0290 Nicotiana tabacum HOM05D001896 ORTHO05D001862 8.2e-13 77.8 132 39.4
GSVIVG01009317001 Vitis vinifera HOM05D001896 ORTHO05D001862 1.4e-12 77.0 155 36.8
Manes.12G116200 Manihot esculenta HOM05D001896 ORTHO05D001862 3.1e-12 75.9 159 37.1
Nn6g34510 Nelumbo nucifera HOM05D001896 ORTHO05D001862 3.1e-12 75.9 146 37.0
Eucgr.L02595 Eucalyptus grandis HOM05D001896 ORTHO05D001862 5.3e-12 75.1 155 39.4
Cpa.g.sc142.51 Carica papaya HOM05D001896 ORTHO05D001862 1.2e-11 73.9 156 35.3
Eucgr.I00689 Eucalyptus grandis HOM05D001896 ORTHO05D001862 1.2e-11 73.9 137 40.1
MD08G1080000 Malus domestica HOM05D001896 ORTHO05D001862 1.2e-11 73.9 172 33.7
Dinv26948 Davidia involucrata HOM05D001896 ORTHO05D001862 2.0e-11 73.2 140 38.6
Gohir.A02G150400 Gossypium hirsutum HOM05D001896 ORTHO05D001862 2.0e-11 73.2 156 37.8
Lj7P110T16 Lonicera japonica HOM05D001896 ORTHO05D001862 2.0e-11 73.2 149 36.9
Peaxi162Scf00548g00211 Petunia axillaris HOM05D001896 ORTHO05D001862 2.0e-11 73.2 128 39.1
Lj4C73T24 Lonicera japonica HOM05D001896 ORTHO05D001862 2.6e-11 72.8 171 32.2
Solyc02g092190.1 Solanum lycopersicum HOM05D001896 ORTHO05D001862 2.6e-11 72.8 134 42.5
Sopen02g036760 Solanum pennellii HOM05D001896 ORTHO05D001862 2.6e-11 72.8 134 42.5
TAR625G0391 Trochodendron aralioides HOM05D001896 ORTHO05D001862 2.6e-11 72.8 152 36.2
Gorai.003G031600 Gossypium raimondii HOM05D001896 ORTHO05D001862 3.4e-11 72.4 156 37.8
Prupe.1G420800 Prunus persica HOM05D001896 ORTHO05D001862 3.4e-11 72.4 159 32.7
Oeu048568.1 Olea europaea HOM05D001896 ORTHO05D001862 4.5e-11 72.0 131 37.4
Gohir.D03G029900 Gossypium hirsutum HOM05D001896 ORTHO05D001862 5.9e-11 71.6 156 37.8
Actinidia32848 Actinidia chinensis HOM05D001896 ORTHO05D001862 1.0e-10 70.9 150 36.7
Glyma.17G159800 Glycine max HOM05D001896 ORTHO05D001862 1.3e-10 70.5 151 38.4
TAR628G1651 Trochodendron aralioides HOM05D001896 ORTHO05D001862 1.3e-10 70.5 147 36.7
Glyma.04G046800 Glycine max HOM05D001896 ORTHO05D001862 1.7e-10 70.1 146 34.9
CiPaw.08G051100 Carya illinoinensis HOM05D001896 ORTHO05D001862 2.2e-10 69.7 150 34.0
Duzib093G0976 Durio zibethinus HOM05D001896 ORTHO05D001862 2.2e-10 69.7 146 33.6
PGSC0003DMG400021411 Solanum tuberosum HOM05D001896 ORTHO05D001862 5.0e-10 68.6 134 38.1
Atru.chr13.855 Acer truncatum HOM05D001896 ORTHO05D001862 6.5e-10 68.2 152 34.2
Duzib116G0259 Durio zibethinus HOM05D001896 ORTHO05D001862 6.5e-10 68.2 149 35.6
CANSAT01G1870 Cannabis sativa HOM05D001896 ORTHO05D001862 1.1e-09 67.4 136 35.3
CiPaw.07G173200 Carya illinoinensis HOM05D001896 ORTHO05D001862 1.1e-09 67.4 152 32.9
CiPaw.01G002900 Carya illinoinensis HOM05D001896 ORTHO05D001862 1.4e-09 67.0 147 38.8
CAN.G1075.50 Capsicum annuum HOM05D001896 ORTHO05D001862 1.9e-09 66.6 150 35.3
Oeu053629.1 Olea europaea HOM05D001896 ORTHO05D001862 2.5e-09 66.2 148 34.5
Migut.N02794 Erythranthe guttata HOM05D001896 ORTHO05D001862 3.2e-09 65.9 123 38.2
Potri.014G006300 Populus trichocarpa HOM05D001896 ORTHO05D001862 3.2e-09 65.9 155 35.5
VMungo1309G2110 Vigna mungo HOM05D001896 ORTHO05D001862 3.2e-09 65.9 148 35.1
SGA_v2.0_scaffold15G07477 Striga asiatica HOM05D042902 ORTHO05D001862 4.2e-09 65.5 124 39.5
QL11p029532 Quercus lobata HOM05D001896 ORTHO05D001862 5.5e-09 65.1 159 32.1
Thecc.02G119300 Theobroma cacao HOM05D001896 ORTHO05D001862 5.5e-09 65.1 153 34.6
Thecc.08G086000 Theobroma cacao HOM05D001896 ORTHO05D001862 5.5e-09 65.1 150 33.3
Cfa004148 Carpinus fangiana HOM05D001896 ORTHO05D001862 1.6e-08 63.5 134 35.1
Manes.05G182700 Manihot esculenta HOM05D001896 ORTHO05D001862 1.6e-08 63.5 152 30.3
Manes.10G086000 Manihot esculenta HOM05D001896 ORTHO05D001862 1.6e-08 63.5 129 37.2
TWI74G0977 Tripterygium wilfordii HOM05D001896 ORTHO05D001862 1.6e-08 63.5 151 33.8
Haze_15187 Corylus avellana HOM05D001896 ORTHO05D001862 2.1e-08 63.2 152 32.9
Glyma.06G047600 Glycine max HOM05D001896 ORTHO05D001862 2.1e-08 63.2 144 32.6
Rhsim06G0063700 Rhododendron simsii HOM05D001896 ORTHO05D001862 2.1e-08 63.2 156 35.9
CDE04G3712 Ceratophyllum demersum HOM05D001896 ORTHO05D001862 2.7e-08 62.8 153 33.3
Duzib052G0412 Durio zibethinus HOM05D001896 ORTHO05D001862 4.6e-08 62.0 151 31.8
Gohir.A11G213300 Gossypium hirsutum HOM05D001896 ORTHO05D001862 4.6e-08 62.0 135 37.0
Nitab4.5_0000142g0300 Nicotiana tabacum HOM05D001896 ORTHO05D001862 4.6e-08 62.0 154 31.8
Peaxi162Scf00449g00045 Petunia axillaris HOM05D001896 ORTHO05D001862 4.6e-08 62.0 158 32.3
SGA_v2.0_scaffold174G39241 Striga asiatica HOM05D001896 ORTHO05D001862 4.6e-08 62.0 155 34.2
ClCG01G017710 Citrullus lanatus HOM05D001896 ORTHO05D001862 6.1e-08 61.6 159 34.6
Dinv44941 Davidia involucrata HOM05D001896 ORTHO05D001862 6.1e-08 61.6 164 31.7
Medtr4g097260 Medicago truncatula HOM05D001896 ORTHO05D001862 6.1e-08 61.6 157 31.8
PSO017G0117 Papaver somniferum HOM05D001896 ORTHO05D001862 6.1e-08 61.6 157 35.7
PSO170G5938 Papaver somniferum HOM05D001896 ORTHO05D001862 6.1e-08 61.6 157 36.3
QL06p039341 Quercus lobata HOM05D001896 ORTHO05D001862 6.1e-08 61.6 137 35.0
Cfa013755 Carpinus fangiana HOM05D001896 ORTHO05D001862 7.9e-08 61.2 150 31.3
Glyma.05G107000 Glycine max HOM05D001896 ORTHO05D001862 7.9e-08 61.2 156 35.9
Gohir.A01G123300 Gossypium hirsutum HOM05D001896 ORTHO05D001862 7.9e-08 61.2 159 32.1
RcHm_v2.0_Chr2g0108431 Rosa chinensis HOM05D001896 ORTHO05D001862 7.9e-08 61.2 140 35.0
Aqoxy6G02538 Aquilegia oxysepala HOM05D001896 ORTHO05D001862 1.0e-07 60.8 127 33.1
FvH4_2g32830 Fragaria vesca HOM05D001896 ORTHO05D001862 1.0e-07 60.8 159 34.0
Phvul.009G073000 Phaseolus vulgaris HOM05D001896 ORTHO05D001862 1.0e-07 60.8 157 33.8
SGA_v2.0_scaffold13G06404 Striga asiatica HOM05D001896 ORTHO05D001862 1.0e-07 60.8 121 41.3
FAN24G0761 Fragaria x ananassa HOM05D000371 ORTHO05D001484 1.4e-07 60.5 159 34.0
Gohir.D01G110900 Gossypium hirsutum HOM05D001896 ORTHO05D001862 1.4e-07 60.5 159 31.4
Gorai.002G135700 Gossypium raimondii HOM05D001896 ORTHO05D001862 1.4e-07 60.5 159 31.4
Medtr3g103290 Medicago truncatula HOM05D001896 ORTHO05D001862 1.4e-07 60.5 155 32.3
TPR.G33724 Trifolium pratense HOM05D001896 ORTHO05D001862 1.4e-07 60.5 155 33.5
RcHm_v2.0_Chr6g0248931 Rosa chinensis HOM05D001896 ORTHO05D001862 1.8e-07 60.1 163 31.3
Atru.chr3.1040 Acer truncatum HOM05D001896 ORTHO05D001862 2.3e-07 59.7 151 31.8
Aqoxy6G02540 Aquilegia oxysepala HOM05D001896 ORTHO05D001862 2.3e-07 59.7 148 31.1
Ciclev10026650m.g Citrus clementina HOM05D001896 ORTHO05D001862 2.3e-07 59.7 155 32.9
Dinv23033 Davidia involucrata HOM05D001896 ORTHO05D001862 2.3e-07 59.7 79 43.0
FAN27G2593 Fragaria x ananassa HOM05D000371 ORTHO05D001484 2.3e-07 59.7 156 34.0
Gohir.D11G209900 Gossypium hirsutum HOM05D001896 ORTHO05D001862 2.3e-07 59.7 134 35.8
Gorai.007G225100 Gossypium raimondii HOM05D001896 ORTHO05D001862 2.3e-07 59.7 134 35.8
Lj4g0024702 Lotus japonicus HOM05D001896 ORTHO05D001862 2.3e-07 59.7 152 32.2
Manes.18G048000 Manihot esculenta HOM05D001896 ORTHO05D001862 2.3e-07 59.7 153 30.7
SalBow7G1468 Salvia bowleyana HOM05D001896 ORTHO05D001862 2.3e-07 59.7 154 31.8
Migut.H00332 Erythranthe guttata HOM05D037187 ORTHO05D001862 3.0e-07 59.3 145 36.6
Psat5g038600 Pisum sativum HOM05D001896 ORTHO05D001862 3.9e-07 58.9 154 32.5
PGR083G2885 Punica granatum HOM05D001896 ORTHO05D001862 3.9e-07 58.9 132 33.3
RcHm_v2.0_Chr6g0309871 Rosa chinensis HOM05D001896 ORTHO05D001862 3.9e-07 58.9 158 31.0
SalBow5G1212 Salvia bowleyana HOM05D001896 ORTHO05D001862 5.1e-07 58.5 139 37.4
FAN20G2517 Fragaria x ananassa HOM05D001896 ORTHO05D001862 6.7e-07 58.2 139 34.5
Lalb_Chr23g0267571 Lupinus albus HOM05D001896 ORTHO05D001862 6.7e-07 58.2 150 32.0
Cpa.g.sc106.35 Carica papaya HOM05D001896 ORTHO05D001862 8.8e-07 57.8 155 29.7
Cc07_g07270 Coffea canephora HOM05D001896 ORTHO05D001862 8.8e-07 57.8 157 30.6
Migut.C00402 Erythranthe guttata HOM05D001896 ORTHO05D001862 8.8e-07 57.8 151 32.5
Psat4g081880 Pisum sativum HOM05D001896 ORTHO05D001862 8.8e-07 57.8 148 31.1
DCAR_003516 Daucus carota HOM05D001896 ORTHO05D001862 1.5e-06 57.0 156 29.5
Sabra07G0004400 Salix brachista HOM05D001896 ORTHO05D001862 1.5e-06 57.0 132 34.8
SGA_v2.0_scaffold152G36823 Striga asiatica HOM05D001896 ORTHO05D001862 1.5e-06 57.0 146 34.2
Ah.15g097370 Amaranthus hybridus HOM05D001896 ORTHO05D001862 2.0e-06 56.6 142 31.0
EL10Ac1g02360 Beta vulgaris HOM05D001896 ORTHO05D001862 2.0e-06 56.6 172 31.4
CDE02G1946 Ceratophyllum demersum HOM05D006615 ORTHO05D007999 2.0e-06 56.6 145 31.7
Glyma.17G233700 Glycine max HOM05D001896 ORTHO05D001862 2.0e-06 56.6 161 30.4
MD15G1067000 Malus domestica HOM05D001896 ORTHO05D001862 2.0e-06 56.6 173 30.6
PGR004G2665 Punica granatum HOM05D001896 ORTHO05D001862 2.0e-06 56.6 134 37.3
Duzib041G0206 Durio zibethinus HOM05D001896 ORTHO05D001862 2.5e-06 56.2 152 30.3
Nn5g30636 Nelumbo nucifera HOM05D001896 ORTHO05D001862 2.5e-06 56.2 149 31.5
PGR031G2497 Punica granatum HOM05D001896 ORTHO05D001862 2.5e-06 56.2 158 32.3
QL12p038359 Quercus lobata HOM05D001896 ORTHO05D001862 2.5e-06 56.2 147 33.3
MELO3C010793.2 Cucumis melo HOM05D001896 ORTHO05D001862 3.3e-06 55.8 160 30.6
CsaV3_6G044240 Cucumis sativus L. HOM05D001896 ORTHO05D001862 3.3e-06 55.8 157 30.6
Gohir.A12G018801 Gossypium hirsutum HOM05D001896 ORTHO05D001862 3.3e-06 55.8 141 29.1
Lsat_1_v5_gn_1_1181 Lactuca sativa HOM05D001896 ORTHO05D001862 3.3e-06 55.8 129 32.6
VMungo0251G2220 Vigna mungo HOM05D001896 ORTHO05D001862 3.3e-06 55.8 159 32.7
CAN.G1075.51 Capsicum annuum HOM05D001896 ORTHO05D001862 4.3e-06 55.5 131 29.0
Cpa.g.c26343.5 Carica papaya HOM05D001896 ORTHO05D001862 4.3e-06 55.5 181 27.6
FvH4_2g03511 Fragaria vesca HOM05D001896 ORTHO05D001862 4.3e-06 55.5 167 33.5
Gohir.D12G019300 Gossypium hirsutum HOM05D001896 ORTHO05D001862 4.3e-06 55.5 142 30.3
Gorai.008G019600 Gossypium raimondii HOM05D001896 ORTHO05D001862 4.3e-06 55.5 142 30.3
CsaV3_2G026000 Cucumis sativus L. HOM05D001896 ORTHO05D001862 5.7e-06 55.1 158 31.0
Lalb_Chr08g0245301 Lupinus albus HOM05D001896 ORTHO05D001862 5.7e-06 55.1 147 32.0
Medtr1g017830 Medicago truncatula HOM05D001896 ORTHO05D001862 5.7e-06 55.1 167 30.5
Oeu053665.1 Olea europaea HOM05D001896 ORTHO05D001862 7.4e-06 54.7 130 36.2
Sed0003560 Sechium edule HOM05D001896 ORTHO05D001862 7.4e-06 54.7 155 30.3
TPR.G24259 Trifolium pratense HOM05D001896 ORTHO05D001862 7.4e-06 54.7 133 31.6
Gorai.009G221200 Gossypium raimondii HOM05D001896 ORTHO05D001862 9.7e-06 54.3 163 30.7


User provided reference genes

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