Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold15G07407 Striga asiatica HOM05D005407 ORTHO05D006544 7.5e-181 637.1 333 100.0
SGA_v2.0_scaffold143G35780 Striga asiatica HOM05D005407 ORTHO05D006544 8.3e-63 245.0 331 53.2
MSTRG.23698 Avicennia marina HOM05D005407 ORTHO05D006544 2.3e-60 236.9 343 51.3
MSTRG.2839 Avicennia marina HOM05D005407 ORTHO05D006544 1.6e-58 230.7 338 49.4
MSTRG.3457 Avicennia marina HOM05D005407 ORTHO05D006544 5.2e-49 199.1 330 46.4
SalBow1G5175 Salvia bowleyana HOM05D005407 ORTHO05D006544 3.7e-47 193.0 323 45.8
Migut.H00374 Erythranthe guttata HOM05D005407 ORTHO05D006544 1.2e-40 171.4 351 41.6
Dinv26896 Davidia involucrata HOM05D005407 ORTHO05D006544 4.2e-38 162.9 335 40.3
Oeu040602.1 Olea europaea HOM05D005407 ORTHO05D006544 9.3e-38 161.8 314 42.4
Actinidia21238 Actinidia chinensis HOM05D005407 ORTHO05D006544 2.2e-31 140.6 313 38.7
Solyc02g092720.1 Solanum lycopersicum HOM05D005407 ORTHO05D006544 2.2e-31 140.6 328 39.0
Nitab4.5_0007941g0010 Nicotiana tabacum HOM05D005407 ORTHO05D006544 1.9e-30 137.5 337 38.6
GSVIVG01000158001 Vitis vinifera HOM05D005407 ORTHO05D006544 1.9e-30 137.5 347 37.5
Sopen02g037270 Solanum pennellii HOM05D005407 ORTHO05D006544 2.1e-29 134.0 331 39.0
unitig_62.g23420 Utricularia gibba HOM05D005407 ORTHO05D006544 3.5e-29 133.3 299 39.1
Nn5g30501 Nelumbo nucifera HOM05D005407 ORTHO05D006544 6.0e-29 132.5 357 34.5
CAN.G1075.9 Capsicum annuum HOM05D005407 ORTHO05D006544 1.0e-28 131.7 299 36.5
Nitab4.5_0003878g0070 Nicotiana tabacum HOM05D005407 ORTHO05D006544 5.1e-28 129.4 342 38.0
Ciclev10025829m.g Citrus clementina HOM05D005407 ORTHO05D006544 2.5e-27 127.1 373 36.5
PGSC0003DMG400024943 Solanum tuberosum HOM05D005407 ORTHO05D006544 1.3e-26 124.8 277 40.4
TWI53G1118 Tripterygium wilfordii HOM05D005407 ORTHO05D006544 4.8e-26 122.9 331 36.9
unitig_52.g17607 Utricularia gibba HOM05D005407 ORTHO05D006544 1.4e-25 121.3 302 34.8
Gohir.A02G153500 Gossypium hirsutum HOM05D005407 ORTHO05D006544 5.3e-25 119.4 328 32.3
Lsat_1_v5_gn_3_87740 Lactuca sativa HOM05D005407 ORTHO05D006544 9.0e-25 118.6 259 37.5
TAR628G1677 Trochodendron aralioides HOM05D005407 ORTHO05D006544 2.0e-24 117.5 318 34.9
Gohir.A11G217700 Gossypium hirsutum HOM05D005407 ORTHO05D006544 1.1e-22 111.7 345 32.5
Actinidia32821 Actinidia chinensis HOM05D005407 ORTHO05D006544 4.2e-22 109.8 188 42.6
Cpa.g.sc6.55 Carica papaya HOM05D005407 ORTHO05D006544 9.3e-22 108.6 304 35.2
Cc07_g06740 Coffea canephora HOM05D005407 ORTHO05D006544 1.2e-21 108.2 353 32.9
Duzib187G0216 Durio zibethinus HOM05D005407 ORTHO05D006544 1.2e-21 108.2 377 31.6
CiPaw.01G007800 Carya illinoinensis HOM05D005407 ORTHO05D006544 6.0e-21 105.9 353 34.0
Gohir.D03G026900 Gossypium hirsutum HOM05D005407 ORTHO05D006544 1.0e-20 105.1 328 31.1
Nn1g04631 Nelumbo nucifera HOM05D005407 ORTHO05D006544 1.3e-20 104.8 343 34.1
DCAR_021471 Daucus carota HOM05D005407 ORTHO05D006544 1.8e-20 104.4 328 32.0
QL06p039956 Quercus lobata HOM05D005407 ORTHO05D006544 1.8e-20 104.4 364 33.2
TWI09G0600 Tripterygium wilfordii HOM05D005407 ORTHO05D006544 1.8e-20 104.4 307 36.2
Gorai.003G028600 Gossypium raimondii HOM05D005407 ORTHO05D006544 2.3e-20 104.0 328 30.8
Cfa004094 Carpinus fangiana HOM05D005407 ORTHO05D006544 3.9e-20 103.2 361 33.8
Gorai.007G220900 Gossypium raimondii HOM05D005407 ORTHO05D006544 5.1e-20 102.8 344 32.6
Gohir.D11G205800 Gossypium hirsutum HOM05D005407 ORTHO05D006544 1.9e-19 100.9 341 32.0
Gorai.008G080000 Gossypium raimondii HOM05D005407 ORTHO05D006544 2.5e-19 100.5 351 33.0
Lj4g0004383 Lotus japonicus HOM05D005407 ORTHO05D006544 2.5e-19 100.5 341 32.6
Lsat_1_v5_gn_4_162000 Lactuca sativa HOM05D005407 ORTHO05D006544 5.6e-19 99.4 319 32.3
Haze_15320 Corylus avellana HOM05D005407 ORTHO05D006544 7.4e-19 99.0 363 32.8
Gohir.A12G074500 Gossypium hirsutum HOM05D005407 ORTHO05D006544 1.3e-18 98.2 349 33.0
Manes.13G114000 Manihot esculenta HOM05D005407 ORTHO05D006544 1.6e-18 97.8 372 30.9
PGR004G2820 Punica granatum HOM05D005407 ORTHO05D006544 1.6e-18 97.8 299 35.5
Duzib264G0474 Durio zibethinus HOM05D005407 ORTHO05D006544 3.7e-18 96.7 377 30.5
Lj2g0008966 Lotus japonicus HOM05D005407 ORTHO05D006544 1.4e-17 94.7 345 32.2
Aqoxy6G02765 Aquilegia oxysepala HOM05D005407 ORTHO05D006544 1.8e-17 94.4 197 40.1
FAN23G2725 Fragaria x ananassa HOM05D005407 ORTHO05D006544 1.8e-17 94.4 371 32.1
Gohir.D12G072700 Gossypium hirsutum HOM05D005407 ORTHO05D006544 1.8e-17 94.4 354 32.5
Peaxi162Scf00365g00076 Petunia axillaris HOM05D005407 ORTHO05D006544 1.8e-17 94.4 338 30.8
CiPaw.02G004700 Carya illinoinensis HOM05D005407 ORTHO05D006544 2.4e-17 94.0 377 30.2
Rhsim08G0096100 Rhododendron simsii HOM05D005407 ORTHO05D006544 6.9e-17 92.4 266 35.0
TPR.G23890 Trifolium pratense HOM05D005407 ORTHO05D006544 1.5e-16 91.3 336 30.7
HanXRQChr12g0373231 Helianthus annuus HOM05D005407 ORTHO05D006544 2.0e-16 90.9 335 30.7
FAN26G3453 Fragaria x ananassa HOM05D005407 ORTHO05D006544 3.4e-16 90.1 372 29.6
RcHm_v2.0_Chr2g0107301 Rosa chinensis HOM05D005407 ORTHO05D006544 3.4e-16 90.1 366 30.3
CANSAT01G3084 Cannabis sativa HOM05D005407 ORTHO05D006544 4.5e-16 89.7 366 29.5
EL10Ac6g15663 Beta vulgaris HOM05D005407 ORTHO05D006544 5.8e-16 89.4 274 33.9
FvH4_1g17130 Fragaria vesca HOM05D005407 ORTHO05D006544 5.8e-16 89.4 367 31.1
FAN19G1545 Fragaria x ananassa HOM05D005407 ORTHO05D006544 5.8e-16 89.4 367 31.1
Eucgr.I00726 Eucalyptus grandis HOM05D005407 ORTHO05D006544 1.0e-15 88.6 361 31.9
PSO675G4008 Papaver somniferum HOM05D005407 ORTHO05D006544 1.0e-15 88.6 352 30.4
Potri.005G145100 Populus trichocarpa HOM05D005407 ORTHO05D006544 1.0e-15 88.6 377 31.0
Potri.007G051800 Populus trichocarpa HOM05D005407 ORTHO05D006544 1.0e-15 88.6 379 30.9
VMungo1011G0001 Vigna mungo HOM05D005407 ORTHO05D006544 1.0e-15 88.6 345 31.3
Duzib147G1232 Durio zibethinus HOM05D005407 ORTHO05D006544 4.9e-15 86.3 371 30.7
Glyma.17G164300 Glycine max HOM05D005407 ORTHO05D006544 4.9e-15 86.3 338 30.2
PSO541G0358 Papaver somniferum HOM05D005407 ORTHO05D006544 4.9e-15 86.3 349 30.4
HPP92_007853 Vanilla planifolia HOM05D005407 ORTHO05D006544 8.4e-15 85.5 324 31.5
CsaV3_6G043820 Cucumis sativus L. HOM05D005407 ORTHO05D006544 1.1e-14 85.1 356 30.6
Dinv30062 Davidia involucrata HOM05D005407 ORTHO05D006544 1.1e-14 85.1 273 35.2
Thecc.01G067900 Theobroma cacao HOM05D005407 ORTHO05D006544 1.1e-14 85.1 385 29.9
Glyma.05G103000 Glycine max HOM05D005407 ORTHO05D006544 1.4e-14 84.7 321 30.8
unitig_899.g14576 Utricularia gibba HOM05D005407 ORTHO05D006544 1.4e-14 84.7 307 33.2
MD15G1292600 Malus domestica HOM05D005407 ORTHO05D006544 3.2e-14 83.6 329 30.4
Sabra05G0114800 Salix brachista HOM05D005407 ORTHO05D006544 3.2e-14 83.6 264 35.6
Sabra05G0115900 Salix brachista HOM05D005407 ORTHO05D006544 3.2e-14 83.6 264 35.6
Gorai.011G107400 Gossypium raimondii HOM05D005407 ORTHO05D006544 4.2e-14 83.2 262 34.0
arahy.Tifrunner.gnm1.ann1.UV71K9 Arachis hypogaea HOM05D005407 ORTHO05D006544 2.1e-13 80.9 347 30.5
Gohir.A10G090300 Gossypium hirsutum HOM05D005407 ORTHO05D006544 6.0e-13 79.3 260 33.8
ClCG01G017290 Citrullus lanatus HOM05D005407 ORTHO05D006544 1.0e-12 78.6 385 29.9
Gohir.D10G097800 Gossypium hirsutum HOM05D005407 ORTHO05D006544 1.0e-12 78.6 262 33.2
arahy.Tifrunner.gnm1.ann1.IRX7P6 Arachis hypogaea HOM05D005407 ORTHO05D006544 1.3e-12 78.2 348 30.2
MELO3C007607.2 Cucumis melo HOM05D005407 ORTHO05D006544 1.8e-12 77.8 334 30.2
Sabra07G0045500 Salix brachista HOM05D005407 ORTHO05D006544 3.0e-12 77.0 380 29.5
Psat4g083080 Pisum sativum HOM05D005407 ORTHO05D006544 5.1e-12 76.3 335 30.1
Sed0008783 Sechium edule HOM05D005407 ORTHO05D006544 6.7e-12 75.9 333 31.8
FAN28G2899 Fragaria x ananassa HOM05D005407 ORTHO05D006544 8.7e-12 75.5 250 34.0
Lalb_Chr16g0389101 Lupinus albus HOM05D005407 ORTHO05D006544 1.9e-11 74.3 282 29.4
Solyc03g150114.1 Solanum lycopersicum HOM05D005407 ORTHO05D006544 1.9e-11 74.3 196 35.7
Oeu054177.1 Olea europaea HOM05D005407 ORTHO05D006544 5.7e-11 72.8 153 38.6
Atru.chr3.207 Acer truncatum HOM05D005407 ORTHO05D006544 1.6e-10 71.2 299 30.8
Peaxi162Scf00264g00321 Petunia axillaris HOM05D005407 ORTHO05D006544 1.6e-10 71.2 329 28.3
Phvul.002G013600 Phaseolus vulgaris HOM05D005407 ORTHO05D006544 2.1e-10 70.9 346 30.3
MD02G1181700 Malus domestica HOM05D005407 ORTHO05D006544 3.7e-10 70.1 366 29.2
Prupe.6G224800 Prunus persica HOM05D005407 ORTHO05D006544 1.8e-09 67.8 282 30.9
CDE04G2817 Ceratophyllum demersum HOM05D005407 ORTHO05D006544 4.1e-09 66.6 167 37.1
VMungo1215G1030 Vigna mungo HOM05D005407 ORTHO05D006544 4.1e-09 66.6 340 29.4
vmacro17985 Vaccinium macrocarpon HOM05D005407 ORTHO05D006544 1.2e-08 65.1 143 39.2
CDE07G1425 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 2.6e-08 63.9 275 28.4
Zm00001eb108270 Zea mays HOM05D013881 ORTHO05D016369 2.6e-08 63.9 256 29.7
Ah.02g125610 Amaranthus hybridus HOM05D005407 ORTHO05D006544 3.4e-08 63.5 207 35.3
CSS0012811 Camellia sinensis var. sinensis HOM05D005407 ORTHO05D006544 4.5e-08 63.2 351 30.2
THA.LOC104827519 Tarenaya hassleriana HOM05D005407 ORTHO05D006544 4.5e-08 63.2 277 28.5
Glyma.11G050800 Glycine max HOM05D005407 ORTHO05D006544 5.0e-07 59.7 338 25.4
Zm00001eb413970 Zea mays HOM05D013881 ORTHO05D016369 5.0e-07 59.7 267 29.2
Carub.0008s2714 Capsella rubella HOM05D005407 ORTHO05D006544 3.2e-06 57.0 187 32.6
Glyma.01G191400 Glycine max HOM05D005407 ORTHO05D006544 3.2e-06 57.0 319 28.5
Zm00001eb326290 Zea mays HOM05D013881 ORTHO05D016369 5.5e-06 56.2 300 28.3
BcaC04g19788 Brassica carinata HOM05D005407 ORTHO05D006544 9.3e-06 55.5 310 26.8
C09p51650 Brassica napus HOM05D005407 ORTHO05D006544 9.3e-06 55.5 310 26.8
BolC9t58026H Brassica oleracea HOM05D005407 ORTHO05D006544 9.3e-06 55.5 310 26.8


User provided reference genes

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