Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold15G07326 Striga asiatica HOM05D006615 ORTHO05D007999 3.0e-106 388.7 218 100.0
MSTRG.2870 Avicennia marina HOM05D006615 ORTHO05D007999 9.9e-73 277.3 231 69.7
Migut.H00418 Erythranthe guttata HOM05D006615 ORTHO05D007999 1.1e-68 263.8 231 71.9
Oeu014828.1 Olea europaea HOM05D006615 ORTHO05D007999 1.3e-67 260.4 231 67.5
Cc07_g06140 Coffea canephora HOM05D006615 ORTHO05D007999 5.4e-63 245.0 227 69.2
Nn5g30349 Nelumbo nucifera HOM05D006615 ORTHO05D007999 1.6e-59 233.4 224 63.8
Peaxi162Scf00549g00014 Petunia axillaris HOM05D006615 ORTHO05D007999 1.6e-59 233.4 216 70.8
vmacro05309 Vaccinium macrocarpon HOM05D006615 ORTHO05D007999 1.6e-59 233.4 229 62.4
Oeu017456.1 Olea europaea HOM05D006615 ORTHO05D007999 2.1e-59 233.0 228 64.0
TAR381G0796 Trochodendron aralioides HOM05D006615 ORTHO05D007999 2.8e-59 232.6 225 63.6
Haze_15377 Corylus avellana HOM05D006615 ORTHO05D007999 4.8e-59 231.9 223 65.0
Rhsim10G0115300 Rhododendron simsii HOM05D006615 ORTHO05D007999 1.1e-58 230.7 229 63.8
CSS0020579 Camellia sinensis var. sinensis HOM05D006615 ORTHO05D007999 1.8e-58 229.9 226 61.1
Oeu049899.1 Olea europaea HOM05D006615 ORTHO05D007999 4.0e-58 228.8 220 66.4
Sopen02g037800 Solanum pennellii HOM05D006615 ORTHO05D007999 5.3e-58 228.4 224 67.9
Solyc02g093220.3 Solanum lycopersicum HOM05D006615 ORTHO05D007999 9.0e-58 227.6 224 67.4
PGSC0003DMG400004030 Solanum tuberosum HOM05D006615 ORTHO05D007999 9.0e-58 227.6 224 67.4
TAR625G0931 Trochodendron aralioides HOM05D006615 ORTHO05D007999 1.2e-57 227.3 227 62.6
QL06p040870 Quercus lobata HOM05D006615 ORTHO05D007999 2.6e-57 226.1 224 64.7
Sabra07G0040600 Salix brachista HOM05D006615 ORTHO05D007999 4.5e-57 225.3 224 54.9
CAN.G370.40 Capsicum annuum HOM05D006615 ORTHO05D007999 5.8e-57 224.9 216 68.1
Sabra05G0110900 Salix brachista HOM05D006615 ORTHO05D007999 5.8e-57 224.9 226 61.9
Nitab4.5_0002765g0020 Nicotiana tabacum HOM05D006615 ORTHO05D007999 1.7e-56 223.4 216 69.0
Potri.005G140000 Populus trichocarpa HOM05D006615 ORTHO05D007999 1.7e-56 223.4 224 62.1
Ah.03g145470 Amaranthus hybridus HOM05D006615 ORTHO05D007999 2.2e-56 223.0 221 54.3
Nitab4.5_0002694g0020 Nicotiana tabacum HOM05D006615 ORTHO05D007999 3.8e-56 222.2 216 68.1
Actinidia12040 Actinidia chinensis HOM05D006615 ORTHO05D007999 4.9e-56 221.9 221 54.8
Prupe.7G131100 Prunus persica HOM05D006615 ORTHO05D007999 4.9e-56 221.9 214 66.4
CDE02G1946 Ceratophyllum demersum HOM05D006615 ORTHO05D007999 8.4e-56 221.1 225 60.4
Ciclev10026421m.g Citrus clementina HOM05D006615 ORTHO05D007999 8.4e-56 221.1 223 61.4
Cpa.g.sc55.125 Carica papaya HOM05D006615 ORTHO05D007999 1.9e-55 219.9 216 55.1
GSVIVG01022099001 Vitis vinifera HOM05D006615 ORTHO05D007999 3.2e-55 219.2 225 54.7
AUR62001910 Chenopodium quinoa HOM05D006615 ORTHO05D007999 7.1e-55 218.0 221 54.3
Hma1.2p1_0670F.1_g200450 Hydrangea macrophylla HOM05D006615 ORTHO05D007999 9.3e-55 217.6 229 52.8
Atru.chr3.300 Acer truncatum HOM05D006615 ORTHO05D007999 1.2e-54 217.2 215 63.7
CDE04G2757 Ceratophyllum demersum HOM05D006615 ORTHO05D007999 2.1e-54 216.5 225 59.1
FAN23G1998 Fragaria x ananassa HOM05D006615 ORTHO05D007999 2.7e-54 216.1 214 65.0
FAN28G0965 Fragaria x ananassa HOM05D006615 ORTHO05D007999 2.7e-54 216.1 214 65.0
Gohir.A02G156700 Gossypium hirsutum HOM05D006615 ORTHO05D007999 2.7e-54 216.1 216 62.0
HanXRQChr09g0263661 Helianthus annuus HOM05D006615 ORTHO05D007999 3.5e-54 215.7 226 62.4
Aqoxy5G01194 Aquilegia oxysepala HOM05D006615 ORTHO05D007999 4.6e-54 215.3 231 51.1
CSS0005072 Camellia sinensis var. sinensis HOM05D006615 ORTHO05D007999 4.6e-54 215.3 227 52.0
COL.COLO4_11446 Corchorus olitorius HOM05D006615 ORTHO05D007999 4.6e-54 215.3 216 62.5
AUR62003898 Chenopodium quinoa HOM05D006615 ORTHO05D007999 6.0e-54 214.9 221 53.4
FvH4_1g16240 Fragaria vesca HOM05D006615 ORTHO05D007999 6.0e-54 214.9 216 63.9
MD02G1174700 Malus domestica HOM05D006615 ORTHO05D007999 6.0e-54 214.9 214 64.0
FAN26G2627 Fragaria x ananassa HOM05D006615 ORTHO05D007999 7.9e-54 214.5 214 64.5
Gorai.003G025500 Gossypium raimondii HOM05D006615 ORTHO05D007999 1.0e-53 214.2 216 61.6
BcaB02g09933 Brassica carinata HOM05D006615 ORTHO05D007999 1.8e-53 213.4 216 63.9
Thhalv10004869m.g Eutrema salsugineum HOM05D006615 ORTHO05D007999 1.8e-53 213.4 218 62.4
RcHm_v2.0_Chr2g0105951 Rosa chinensis HOM05D006615 ORTHO05D007999 2.3e-53 213.0 214 63.6
AL8G44220 Arabidopsis lyrata HOM05D006615 ORTHO05D007999 3.0e-53 212.6 216 64.4
Duzib147G0216 Durio zibethinus HOM05D006615 ORTHO05D007999 3.0e-53 212.6 225 60.4
BraA07t29407Z Brassica rapa HOM05D006615 ORTHO05D007999 3.9e-53 212.2 216 63.4
Gohir.A12G072600 Gossypium hirsutum HOM05D006615 ORTHO05D007999 3.9e-53 212.2 216 62.0
Carub.0008s2737 Capsella rubella HOM05D006615 ORTHO05D007999 5.1e-53 211.8 216 63.9
A07p16820 Brassica napus HOM05D006615 ORTHO05D007999 8.7e-53 211.1 216 63.9
Gohir.D03G024000 Gossypium hirsutum HOM05D006615 ORTHO05D007999 8.7e-53 211.1 216 61.1
MD15G1285700 Malus domestica HOM05D006615 ORTHO05D007999 8.7e-53 211.1 214 62.1
Manes.12G104500 Manihot esculenta HOM05D006615 ORTHO05D007999 8.7e-53 211.1 225 60.4
DCAR_010880 Daucus carota HOM05D006615 ORTHO05D007999 1.1e-52 210.7 225 60.4
Gohir.D12G070500 Gossypium hirsutum HOM05D006615 ORTHO05D007999 1.5e-52 210.3 216 56.9
Gorai.008G077500 Gossypium raimondii HOM05D006615 ORTHO05D007999 1.5e-52 210.3 216 56.9
C07p24600 Brassica napus HOM05D006615 ORTHO05D007999 1.9e-52 209.9 215 63.3
BolC7t42980H Brassica oleracea HOM05D006615 ORTHO05D007999 1.9e-52 209.9 215 63.3
FAN19G1431 Fragaria x ananassa HOM05D006615 ORTHO05D007999 2.5e-52 209.5 216 63.0
Sc03g0001700 Simmondsia chinensis HOM05D006615 ORTHO05D007999 3.3e-52 209.1 215 52.1
ClCG02G012310 Citrullus lanatus HOM05D006615 ORTHO05D007999 4.3e-52 208.8 227 58.6
PSO170G0414 Papaver somniferum HOM05D006615 ORTHO05D007999 4.3e-52 208.8 230 51.3
CARHR280510 Cardamine hirsuta HOM05D006615 ORTHO05D007999 5.6e-52 208.4 216 63.4
ATR0800G077 Amborella trichopoda HOM05D006615 ORTHO05D007999 7.4e-52 208.0 224 62.1
AT5G67140 Arabidopsis thaliana HOM05D006615 ORTHO05D007999 7.4e-52 208.0 216 63.4
PSO210G0040 Papaver somniferum HOM05D006615 ORTHO05D007999 9.6e-52 207.6 230 50.9
THA.LOC104821250 Tarenaya hassleriana HOM05D006615 ORTHO05D007999 1.6e-51 206.8 215 63.3
Lsat_1_v5_gn_4_164980 Lactuca sativa HOM05D006615 ORTHO05D007999 3.7e-51 205.7 225 61.3
Sp2g29550 Schrenkiella parvula HOM05D006615 ORTHO05D007999 3.7e-51 205.7 214 62.6
CsaV3_2G016460 Cucumis sativus L. HOM05D006615 ORTHO05D007999 1.1e-50 204.1 212 59.9
HPP92_026439 Vanilla planifolia HOM05D006615 ORTHO05D007999 1.4e-50 203.8 214 61.7
Aa31LG1G15650 Aethionema arabicum HOM05D006615 ORTHO05D007999 1.8e-50 203.4 216 60.2
Thecc.01G059100 Theobroma cacao HOM05D006615 ORTHO05D007999 1.8e-50 203.4 210 62.4
Cfa004036 Carpinus fangiana HOM05D006615 ORTHO05D007999 3.1e-50 202.6 206 62.6
Hund16348 Selenicereus undatus HOM05D006615 ORTHO05D007999 6.9e-50 201.4 273 43.6
MELO3C020856.2 Cucumis melo HOM05D006615 ORTHO05D007999 3.4e-49 199.1 232 56.0
Dinv26838 Davidia involucrata HOM05D000573 ORTHO05D000425 5.8e-49 198.4 168 63.1
Lj2g0018871 Lotus japonicus HOM05D006615 ORTHO05D007999 1.7e-48 196.8 205 63.4
Medtr5g016890 Medicago truncatula HOM05D006615 ORTHO05D007999 2.9e-48 196.1 207 61.4
Lj4C151G8 Lonicera japonica HOM05D006615 ORTHO05D007999 3.8e-48 195.7 209 59.3
Lalb_Chr16g0378591 Lupinus albus HOM05D006615 ORTHO05D007999 6.5e-48 194.9 207 62.8
arahy.Tifrunner.gnm1.ann1.XJ9ES7 Arachis hypogaea HOM05D006615 ORTHO05D007999 1.4e-47 193.7 213 62.0
CiPaw.01G016200 Carya illinoinensis HOM05D006615 ORTHO05D007999 1.4e-47 193.7 209 51.2
Glyma.11G054300 Glycine max HOM05D006615 ORTHO05D007999 1.9e-47 193.4 209 61.7
TPR.G26907 Trifolium pratense HOM05D006615 ORTHO05D007999 1.9e-47 193.4 207 53.6
Sed0009491 Sechium edule HOM05D006615 ORTHO05D007999 2.5e-47 193.0 214 54.7
Psat2g167840 Pisum sativum HOM05D006615 ORTHO05D007999 5.5e-47 191.8 207 53.6
arahy.Tifrunner.gnm1.ann1.8K3JW9 Arachis hypogaea HOM05D006615 ORTHO05D007999 1.2e-46 190.7 213 61.5
TWI09G1033 Tripterygium wilfordii HOM05D006615 ORTHO05D007999 2.7e-46 189.5 220 47.3
Glyma.01G187800 Glycine max HOM05D006615 ORTHO05D007999 5.1e-45 185.3 200 62.5
Phvul.002G017400 Phaseolus vulgaris HOM05D006615 ORTHO05D007999 6.7e-45 184.9 207 60.9
CsaV3_2G016470 Cucumis sativus L. HOM05D006615 ORTHO05D007999 8.7e-45 184.5 214 56.1
VMungo1215G1750 Vigna mungo HOM05D006615 ORTHO05D007999 7.4e-44 181.4 207 61.8
ECA232G2507 Erigeron canadensis HOM05D002761 ORTHO05D003351 9.6e-44 181.0 166 57.8
Eucgr.H01687 Eucalyptus grandis HOM05D006615 ORTHO05D007999 9.6e-44 181.0 210 48.1
MELO3C020857.2 Cucumis melo HOM05D006615 ORTHO05D007999 2.1e-43 179.9 214 55.1
unitig_748.g8604 Utricularia gibba HOM05D002191 ORTHO05D007999 6.3e-43 178.3 157 60.5
Atru.chr3.288 Acer truncatum HOM05D006615 ORTHO05D007999 1.4e-42 177.2 191 61.3
Lalb_Chr05g0213321 Lupinus albus HOM05D006615 ORTHO05D007999 7.6e-41 171.4 207 48.3
SEGI_10636 Sequoiadendron giganteum HOM05D006615 ORTHO05D007999 1.2e-38 164.1 216 52.8
CANSAT01G0297 Cannabis sativa HOM05D006615 ORTHO05D007999 3.9e-37 159.1 201 47.3
Zm00001eb375600 Zea mays HOM05D006615 ORTHO05D007999 6.7e-37 158.3 214 43.9
Os06g0166000 Oryza sativa ssp. japonica HOM05D006615 ORTHO05D007999 2.8e-35 152.9 216 41.2
Actinidia36482 Actinidia chinensis HOM05D006615 ORTHO05D007999 2.4e-34 149.8 212 46.2
Aqoxy6G01271 Aquilegia oxysepala HOM05D006615 ORTHO05D007999 1.1e-28 131.0 212 49.5
MSTRG.3434 Avicennia marina HOM05D006615 ORTHO05D007999 1.5e-28 130.6 104 81.7
Potri.007G045601 Populus trichocarpa HOM05D006615 ORTHO05D007999 6.3e-27 125.2 78 75.6
AagrBONN_evm.TU.Sc2ySwM_344.5234 Anthoceros agrestis HOM05D006615 ORTHO05D007999 4.1e-26 122.5 214 44.4
Pp3c7_15700 Physcomitrium patens HOM05D006615 ORTHO05D007999 6.9e-26 121.7 204 46.6
Mapoly0005s0095 Marchantia polymorpha HOM05D006615 ORTHO05D007999 3.8e-24 115.9 169 40.2
TWI73G1298 Tripterygium wilfordii HOM05D006615 ORTHO05D007999 4.1e-18 95.9 91 50.5
ClCG02G012330 Citrullus lanatus HOM05D006615 ORTHO05D007999 3.2e-15 86.3 82 52.4
SMO164G0246 Selaginella moellendorffii HOM05D006615 ORTHO05D007999 3.2e-15 86.3 202 41.6
Phvul.008G146300 Phaseolus vulgaris HOM05D006615 ORTHO05D007999 4.8e-11 72.4 44 72.7
EL10Ac6g15726 Beta vulgaris HOM05D006615 ORTHO05D007999 1.1e-10 71.2 146 34.9


User provided reference genes

Program Settings