Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold15G07303 Striga asiatica HOM05D005490 ORTHO05D006606 3.8e-281 971.1 576 100.0
Migut.H00433 Erythranthe guttata HOM05D005490 ORTHO05D006606 4.3e-168 595.5 443 79.2
Hma1.2p1_0461F.1_g157810 Hydrangea macrophylla HOM05D005490 ORTHO05D006606 1.9e-163 580.1 444 74.5
CAN.G660.7 Capsicum annuum HOM05D005490 ORTHO05D006606 1.2e-162 577.4 449 74.2
Cc07_g05990 Coffea canephora HOM05D005490 ORTHO05D006606 8.8e-161 571.2 449 76.6
PGSC0003DMG400004042 Solanum tuberosum HOM05D005490 ORTHO05D006606 2.5e-160 569.7 450 72.0
Solyc02g090850.3 Solanum lycopersicum HOM05D005490 ORTHO05D006606 3.3e-160 569.3 450 71.8
Dinv29986 Davidia involucrata HOM05D005490 ORTHO05D006606 1.7e-159 567.0 451 73.2
Oeu031525.2 Olea europaea HOM05D005490 ORTHO05D006606 1.7e-159 567.0 450 74.9
Actinidia03792 Actinidia chinensis HOM05D005490 ORTHO05D006606 6.9e-158 561.6 450 72.4
Lj7A69T47 Lonicera japonica HOM05D005490 ORTHO05D006606 6.9e-158 561.6 484 70.5
TWI09G1398 Tripterygium wilfordii HOM05D005490 ORTHO05D006606 9.1e-158 561.2 451 73.8
Thecc.01G056300 Theobroma cacao HOM05D005490 ORTHO05D006606 2.0e-157 560.1 451 71.6
DCAR_025733 Daucus carota HOM05D005490 ORTHO05D006606 1.1e-155 554.3 475 68.2
GSVIVG01022130001 Vitis vinifera HOM05D005490 ORTHO05D006606 2.5e-155 553.1 448 71.0
Nitab4.5_0002016g0110 Nicotiana tabacum HOM05D005490 ORTHO05D006606 3.2e-155 552.7 450 72.9
CANSAT01G1717 Cannabis sativa HOM05D005490 ORTHO05D006606 5.5e-155 552.0 450 70.2
CiPaw.01G018200 Carya illinoinensis HOM05D005490 ORTHO05D006606 5.5e-155 552.0 448 71.7
Oeu062437.1 Olea europaea HOM05D005490 ORTHO05D006606 9.4e-155 551.2 449 73.7
Manes.12G106800 Manihot esculenta HOM05D005490 ORTHO05D006606 2.1e-154 550.1 452 72.8
Gohir.D11G199100 Gossypium hirsutum HOM05D005490 ORTHO05D006606 1.0e-153 547.7 447 71.4
RcHm_v2.0_Chr2g0105671 Rosa chinensis HOM05D005490 ORTHO05D006606 2.3e-153 546.6 446 72.0
Gorai.007G213300 Gossypium raimondii HOM05D005490 ORTHO05D006606 3.0e-153 546.2 446 71.3
Nn5g30300 Nelumbo nucifera HOM05D005490 ORTHO05D006606 5.1e-153 545.4 450 72.4
Lsat_1_v5_gn_2_84101 Lactuca sativa HOM05D005490 ORTHO05D006606 6.7e-153 545.0 472 69.3
ECA238G0711 Erigeron canadensis HOM05D005490 ORTHO05D006606 1.1e-152 544.3 445 72.4
Duzib187G0068 Durio zibethinus HOM05D005490 ORTHO05D006606 2.2e-151 540.0 461 69.4
Prupe.7G133300 Prunus persica HOM05D005490 ORTHO05D006606 3.7e-151 539.3 449 69.5
VMungo1215G3252 Vigna mungo HOM05D005490 ORTHO05D006606 3.7e-151 539.3 453 70.2
arahy.Tifrunner.gnm1.ann1.JF37M9 Arachis hypogaea HOM05D005490 ORTHO05D006606 4.8e-151 538.9 449 71.9
Gohir.A11G192400 Gossypium hirsutum HOM05D005490 ORTHO05D006606 4.8e-151 538.9 446 70.4
Medtr5g017430 Medicago truncatula HOM05D005490 ORTHO05D006606 4.1e-150 535.8 449 72.4
QL06p041379 Quercus lobata HOM05D005490 ORTHO05D006606 4.1e-150 535.8 484 66.9
COL.COLO4_11415 Corchorus olitorius HOM05D005490 ORTHO05D006606 7.0e-150 535.0 446 70.6
Sc03g0001580 Simmondsia chinensis HOM05D005490 ORTHO05D006606 1.2e-149 534.3 446 72.6
Lj2g0003149 Lotus japonicus HOM05D005490 ORTHO05D006606 1.5e-149 533.9 450 71.3
Cfa004023 Carpinus fangiana HOM05D005490 ORTHO05D006606 2.0e-149 533.5 450 71.6
HanXRQChr14g0442791 Helianthus annuus HOM05D005490 ORTHO05D006606 2.6e-149 533.1 459 65.8
Phvul.002G018900 Phaseolus vulgaris HOM05D005490 ORTHO05D006606 2.6e-149 533.1 452 70.1
CsaV3_2G016660 Cucumis sativus L. HOM05D005490 ORTHO05D006606 4.5e-149 532.3 450 70.7
Potri.007G044100 Populus trichocarpa HOM05D005490 ORTHO05D006606 7.7e-149 531.6 452 69.2
Ciclev10025320m.g Citrus clementina HOM05D005490 ORTHO05D006606 2.9e-148 529.6 450 71.1
Lalb_Chr05g0213291 Lupinus albus HOM05D005490 ORTHO05D006606 2.9e-148 529.6 454 68.3
arahy.Tifrunner.gnm1.ann1.5GG3L5 Arachis hypogaea HOM05D005490 ORTHO05D006606 3.8e-148 529.3 478 67.8
FAN19G0012 Fragaria x ananassa HOM05D005490 ORTHO05D006606 5.0e-148 528.9 460 70.0
Glyma.01G186000 Glycine max HOM05D005490 ORTHO05D006606 6.5e-148 528.5 452 70.4
THA.LOC104804216 Tarenaya hassleriana HOM05D005490 ORTHO05D006606 1.1e-147 527.7 452 69.2
Sed0007368 Sechium edule HOM05D005490 ORTHO05D006606 1.5e-147 527.3 452 69.9
TPR.G30705 Trifolium pratense HOM05D005490 ORTHO05D006606 2.5e-147 526.6 450 71.8
Gohir.A02G157300 Gossypium hirsutum HOM05D005490 ORTHO05D006606 7.2e-147 525.0 448 70.3
Gorai.003G025100 Gossypium raimondii HOM05D005490 ORTHO05D006606 2.1e-146 523.5 448 71.7
FAN28G1226 Fragaria x ananassa HOM05D005490 ORTHO05D006606 3.6e-146 522.7 460 69.1
Ca_24770_v3 Cicer arietinum L. HOM05D005490 ORTHO05D006606 1.8e-145 520.4 448 69.2
Sabra07G0038800 Salix brachista HOM05D005490 ORTHO05D006606 8.8e-145 518.1 503 62.8
Glyma.11G056000 Glycine max HOM05D005490 ORTHO05D006606 4.4e-144 515.8 450 68.7
Thhalv10025018m.g Eutrema salsugineum HOM05D005490 ORTHO05D006606 1.3e-143 514.2 448 70.3
C01p01990 Brassica napus HOM05D005490 ORTHO05D006606 2.2e-143 513.5 445 68.5
Sp7g34780 Schrenkiella parvula HOM05D005490 ORTHO05D006606 2.2e-143 513.5 449 69.3
Hund16323 Selenicereus undatus HOM05D005490 ORTHO05D006606 4.8e-143 512.3 447 68.5
PSO170G3823 Papaver somniferum HOM05D005490 ORTHO05D006606 1.1e-142 511.1 449 69.5
PSO210G6251 Papaver somniferum HOM05D005490 ORTHO05D006606 1.1e-142 511.1 447 69.8
Gohir.D03G023600 Gossypium hirsutum HOM05D005490 ORTHO05D006606 2.4e-142 510.0 448 70.5
AL7G13750 Arabidopsis lyrata HOM05D005490 ORTHO05D006606 3.1e-142 509.6 449 69.9
Psat2g166360 Pisum sativum HOM05D005490 ORTHO05D006606 3.1e-142 509.6 449 68.6
A01p01850 Brassica napus HOM05D005490 ORTHO05D006606 5.3e-142 508.8 447 68.0
BraA01t00174Z Brassica rapa HOM05D005490 ORTHO05D006606 5.3e-142 508.8 447 68.0
CSS0049924 Camellia sinensis var. sinensis HOM05D005490 ORTHO05D006606 1.6e-141 507.3 449 68.8
AT4G36980 Arabidopsis thaliana HOM05D005490 ORTHO05D006606 3.5e-141 506.1 448 68.3
Carub.0007s0317 Capsella rubella HOM05D005490 ORTHO05D006606 4.5e-141 505.8 445 68.5
BolC1t00193H Brassica oleracea HOM05D005490 ORTHO05D006606 3.8e-140 502.7 456 66.7
BcaNung02520 Brassica carinata HOM05D005490 ORTHO05D006606 1.5e-139 500.7 446 66.8
Aa31LG6G13990 Aethionema arabicum HOM05D005490 ORTHO05D006606 2.5e-139 500.0 461 64.2
EL10Ac6g15745 Beta vulgaris HOM05D005490 ORTHO05D006606 2.7e-138 496.5 463 67.0
Os03g0395900 Oryza sativa ssp. japonica HOM05D005490 ORTHO05D006606 1.5e-136 490.7 450 64.4
CARHR245520 Cardamine hirsuta HOM05D005490 ORTHO05D006606 2.4e-134 483.4 446 65.9
ClCG02G012530 Citrullus lanatus HOM05D005490 ORTHO05D006606 2.7e-133 479.9 448 65.4
Aqoxy5G01229 Aquilegia oxysepala HOM05D005490 ORTHO05D006606 1.5e-128 464.2 372 71.8
CDE08G0045 Ceratophyllum demersum HOM05D005490 ORTHO05D006606 7.5e-128 461.8 457 62.6
MD02G1172000 Malus domestica HOM05D005490 ORTHO05D006606 4.1e-126 456.1 373 70.5
AUR62001928 Chenopodium quinoa HOM05D005490 ORTHO05D006606 3.5e-125 453.0 473 58.6
TAR381G1106 Trochodendron aralioides HOM05D005490 ORTHO05D006606 5.9e-125 452.2 374 69.0
HPP92_004114 Vanilla planifolia HOM05D005490 ORTHO05D006606 2.5e-123 446.8 448 62.1
CDE06G1923 Ceratophyllum demersum HOM05D005490 ORTHO05D006606 5.5e-123 445.7 447 62.0
Peaxi162Scf00450g00420 Petunia axillaris HOM05D005490 ORTHO05D006606 9.5e-123 444.9 448 59.8
FAN26G0668 Fragaria x ananassa HOM05D005490 ORTHO05D006606 2.1e-122 443.7 384 69.3
Potri.005G138200 Populus trichocarpa HOM05D005490 ORTHO05D006606 1.8e-121 440.7 375 68.8
ATR1102G026 Amborella trichopoda HOM05D005490 ORTHO05D006606 4.0e-121 439.5 453 61.1
FAN23G2111 Fragaria x ananassa HOM05D005490 ORTHO05D006606 8.9e-113 411.8 387 66.1
unitig_899.g14662 Utricularia gibba HOM05D005490 ORTHO05D006606 4.9e-111 406.0 366 69.4
Ah.03g145080 Amaranthus hybridus HOM05D005490 ORTHO05D006606 1.3e-108 397.9 383 66.6
AUR62003882 Chenopodium quinoa HOM05D005490 ORTHO05D006606 3.1e-105 386.7 472 52.8
Sabra05G0112300 Salix brachista HOM05D005490 ORTHO05D006606 3.4e-104 383.3 472 55.3
Mapoly0012s0107 Marchantia polymorpha HOM05D005490 ORTHO05D006606 3.9e-100 369.8 467 51.0
Nitab4.5_0002440g0010 Nicotiana tabacum HOM05D005490 ORTHO05D006606 4.3e-99 366.3 451 52.1
Rhsim08G0100400 Rhododendron simsii HOM05D005490 ORTHO05D006606 1.8e-97 360.9 450 54.7
Hma1.2p1_0461F.1_g157800 Hydrangea macrophylla HOM05D005490 ORTHO05D006606 1.3e-92 344.7 312 68.6
Pp3c7_5520 Physcomitrium patens HOM05D005490 ORTHO05D006606 6.4e-87 325.9 480 49.6
MD15G1284300 Malus domestica HOM05D005490 ORTHO05D006606 6.2e-82 309.3 320 62.2
Eucgr.I00926 Eucalyptus grandis HOM05D005490 ORTHO05D006606 2.6e-80 303.9 311 62.7
Pp3c11_20900 Physcomitrium patens HOM05D005490 ORTHO05D006606 2.6e-80 303.9 472 46.4
FvH4_1g16060 Fragaria vesca HOM05D005490 ORTHO05D006606 2.9e-79 300.4 305 64.9
MELO3C020875.2 Cucumis melo HOM05D005490 ORTHO05D006606 7.9e-77 292.4 309 64.7
Atru.chr3.327 Acer truncatum HOM05D005490 ORTHO05D006606 1.3e-76 291.6 307 63.2
vmacro17955 Vaccinium macrocarpon HOM05D005490 ORTHO05D006606 5.1e-76 289.7 342 59.4
Dinv39848 Davidia involucrata HOM05D005490 ORTHO05D006606 4.3e-75 286.6 238 71.4
HPP92_004074 Vanilla planifolia HOM05D005490 ORTHO05D006606 1.3e-68 265.0 322 58.4
Sopen02g035470 Solanum pennellii HOM05D005490 ORTHO05D006606 1.1e-62 245.4 241 63.1
SEGI_00791 Sequoiadendron giganteum HOM05D005490 ORTHO05D006606 4.6e-61 240.0 154 77.9
SEGI_41077 Sequoiadendron giganteum HOM05D005490 ORTHO05D006606 7.9e-61 239.2 296 58.1
SMO356G0652 Selaginella moellendorffii HOM05D005490 ORTHO05D006606 7.4e-59 232.6 244 56.1
Actinidia16483 Actinidia chinensis HOM05D005490 ORTHO05D006606 2.4e-57 227.6 269 60.6
Atru.chr3.328 Acer truncatum HOM05D005490 ORTHO05D006606 4.5e-56 223.4 128 84.4
Cpa.g.sc55.148 Carica papaya HOM05D005490 ORTHO05D006606 1.0e-55 222.2 128 85.2
MD15G1284200 Malus domestica HOM05D005490 ORTHO05D006606 1.9e-51 208.0 128 84.4
Zm00001eb019290 Zea mays HOM05D005490 ORTHO05D006606 3.7e-50 203.8 237 54.9
Actinidia36493 Actinidia chinensis HOM05D005490 ORTHO05D006606 8.5e-47 192.6 351 43.6
Haze_15401 Corylus avellana HOM05D005490 ORTHO05D006606 1.4e-46 191.8 199 62.3
Haze_15403 Corylus avellana HOM05D005490 ORTHO05D006606 7.2e-46 189.5 199 61.8
CBR_g38045 Chara braunii HOM05D005490 ORTHO05D000004 3.4e-40 170.6 432 42.4
Actinidia16484 Actinidia chinensis HOM05D005490 ORTHO05D006606 2.1e-37 161.4 84 91.7
AagrBONN_evm.TU.Sc2ySwM_344.4468 Anthoceros agrestis HOM05D005490 ORTHO05D006606 1.8e-36 158.3 477 32.1
VMungo1309G0325 Vigna mungo HOM05D005490 ORTHO05D006606 4.0e-28 130.6 160 51.2
VMungo0720G1861 Vigna mungo HOM05D005490 ORTHO05D006606 3.5e-24 117.5 143 51.0
FAN22G1581 Fragaria x ananassa HOM05D005490 ORTHO05D006606 3.2e-22 110.9 72 76.4
SHI08459 Sapria himalayana HOM05D005490 ORTHO05D006606 7.2e-22 109.8 66 83.3
FAN17G2271 Fragaria x ananassa HOM05D005490 ORTHO05D006606 1.4e-20 105.5 66 80.3
FAN17G1267 Fragaria x ananassa HOM05D005490 ORTHO05D006606 1.4e-17 95.5 64 79.7
CSS0031445 Camellia sinensis var. sinensis HOM05D005490 ORTHO05D006606 1.0e-15 89.4 72 70.8
Actinidia36494 Actinidia chinensis HOM05D005490 ORTHO05D006606 2.2e-15 88.2 72 68.1
Aqoxy5G01228 Aquilegia oxysepala HOM05D005490 ORTHO05D006606 3.8e-15 87.4 74 66.2
MD02G1172100 Malus domestica HOM05D005490 ORTHO05D006606 4.7e-13 80.5 73 65.8
VMungo1309G1585 Vigna mungo HOM05D005490 ORTHO05D006606 6.1e-13 80.1 86 53.5
VMungo0251G2361 Vigna mungo HOM05D007793 ORTHO05D010104 6.8e-12 76.6 93 50.5
CDE08G1038 Ceratophyllum demersum HOM05D005490 ORTHO05D006606 1.2e-11 75.9 370 29.5
Atru.chr10.1611 Acer truncatum HOM05D005490 ORTHO05D006606 5.7e-11 73.6 50 70.0
Cre12.g498350 Chlamydomonas reinhardtii HOM05D005490 ORTHO05D006606 2.5e-06 58.2 328 25.6


User provided reference genes

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