Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold15G07279 Striga asiatica HOM05D000988 ORTHO05D000724 3.3e-79 298.5 176 100.0
SGA_v2.0_scaffold204G41577 Striga asiatica HOM05D000988 ORTHO05D000724 6.8e-32 141.4 179 54.2
MSTRG.23759 Avicennia marina HOM05D000988 ORTHO05D000724 4.9e-22 108.6 145 52.4
SalBow5G1305 Salvia bowleyana HOM05D000988 ORTHO05D000724 4.9e-22 108.6 144 48.6
SalBow5G4663 Salvia bowleyana HOM05D000988 ORTHO05D000724 4.9e-22 108.6 144 48.6
Oeu050777.1 Olea europaea HOM05D000988 ORTHO05D000724 1.1e-16 90.9 145 44.8
MSTRG.15394 Avicennia marina HOM05D000988 ORTHO05D000724 2.4e-16 89.7 184 39.1
MSTRG.3421 Avicennia marina HOM05D000988 ORTHO05D000724 2.0e-15 86.7 184 37.5
Migut.K00762 Erythranthe guttata HOM05D000988 ORTHO05D000724 2.0e-15 86.7 148 43.9
Migut.H00444 Erythranthe guttata HOM05D000988 ORTHO05D000724 1.6e-12 77.0 195 39.0
CSS0048797 Camellia sinensis var. sinensis HOM05D000988 ORTHO05D000724 3.9e-11 72.4 152 38.8
Dinv39865 Davidia involucrata HOM05D000988 ORTHO05D000724 3.9e-11 72.4 151 39.1
Oeu004831.1 Olea europaea HOM05D000988 ORTHO05D000724 1.9e-10 70.1 152 40.8
Dinv29977 Davidia involucrata HOM05D000988 ORTHO05D000724 2.1e-09 66.6 206 32.5
CSS0047121 Camellia sinensis var. sinensis HOM05D000988 ORTHO05D000724 2.8e-09 66.2 111 41.4
GSVIVG01022145001 Vitis vinifera HOM05D000988 ORTHO05D000724 3.7e-09 65.9 154 38.3
Manes.13G127100 Manihot esculenta HOM05D000988 ORTHO05D000724 1.5e-07 60.5 109 44.0
Actinidia16502 Actinidia chinensis HOM05D000988 ORTHO05D000724 3.4e-07 59.3 151 35.8
vmacro17945 Vaccinium macrocarpon HOM05D000988 ORTHO05D000724 4.5e-07 58.9 173 35.3
Peaxi162Scf00450g00739 Petunia axillaris HOM05D000988 ORTHO05D000724 7.6e-07 58.2 134 38.1
Duzib187G2011 Durio zibethinus HOM05D000988 ORTHO05D000724 9.9e-07 57.8 104 40.4
Manes.12G103100 Manihot esculenta HOM05D000988 ORTHO05D000724 9.9e-07 57.8 115 43.5
ClCG02G012780 Citrullus lanatus HOM05D000988 ORTHO05D000724 6.4e-06 55.1 150 35.3
CSS0017394 Camellia sinensis var. sinensis HOM05D000988 ORTHO05D000724 8.4e-06 54.7 184 31.0


User provided reference genes

Program Settings