Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold15G07274 Striga asiatica HOM05D005929 ORTHO05D007869 0.0e+00 1372.1 695 100.0
Migut.H00446 Erythranthe guttata HOM05D005929 ORTHO05D007869 1.7e-291 1005.7 700 75.1
MSTRG.23760 Avicennia marina HOM05D005929 ORTHO05D007869 9.2e-282 973.4 702 72.4
Dinv39868 Davidia involucrata HOM05D005929 ORTHO05D007869 5.1e-256 887.9 713 66.5
CSS0000081 Camellia sinensis var. sinensis HOM05D005929 ORTHO05D007869 1.1e-247 860.1 722 64.8
Actinidia16503 Actinidia chinensis HOM05D005929 ORTHO05D007869 1.9e-247 859.4 716 65.2
Potri.005G137100 Populus trichocarpa HOM05D005929 ORTHO05D007869 1.4e-242 843.2 716 63.3
unitig_899.g14965 Utricularia gibba HOM05D005929 ORTHO05D007869 1.9e-242 842.8 732 63.7
Cfa004003 Carpinus fangiana HOM05D005929 ORTHO05D007869 4.2e-242 841.6 730 63.0
GSVIVG01022148001 Vitis vinifera HOM05D005929 ORTHO05D007869 1.6e-241 839.7 714 63.3
Cc07_g05890 Coffea canephora HOM05D005929 ORTHO05D007869 2.3e-240 835.9 710 63.9
Ciclev10025029m.g Citrus clementina HOM05D005929 ORTHO05D007869 8.7e-240 833.9 728 63.3
Manes.12G099700 Manihot esculenta HOM05D005929 ORTHO05D007869 8.7e-240 833.9 721 62.8
PGR102G2065 Punica granatum HOM05D005929 ORTHO05D007869 4.3e-239 831.6 722 62.6
Oeu039068.2 Olea europaea HOM05D005929 ORTHO05D007869 5.7e-239 831.2 734 62.4
MD00G1045200 Malus domestica HOM05D005929 ORTHO05D007869 4.8e-238 828.2 740 61.4
Nn1g05837 Nelumbo nucifera HOM05D005929 ORTHO05D007869 8.2e-238 827.4 729 63.0
TAR628G1297 Trochodendron aralioides HOM05D005929 ORTHO05D007869 1.8e-237 826.2 722 62.5
Sabra05G0109600 Salix brachista HOM05D005929 ORTHO05D007869 3.1e-237 825.5 716 62.0
CANSAT56G1082 Cannabis sativa HOM05D005929 ORTHO05D007869 3.4e-236 822.0 734 61.0
Prupe.7G135500 Prunus persica HOM05D005929 ORTHO05D007869 1.0e-235 820.5 726 61.6
ClCG01G016760 Citrullus lanatus HOM05D005929 ORTHO05D007869 1.3e-235 820.1 716 63.8
COL.COLO4_11392 Corchorus olitorius HOM05D005929 ORTHO05D007869 1.3e-235 820.1 715 63.1
DCAR_010904 Daucus carota HOM05D005929 ORTHO05D007869 2.2e-235 819.3 717 62.1
Lalb_Chr05g0226621 Lupinus albus HOM05D005929 ORTHO05D007869 2.9e-235 818.9 707 62.4
RcHm_v2.0_Chr2g0105071 Rosa chinensis HOM05D005929 ORTHO05D007869 6.5e-235 817.8 727 61.5
TWI09G0459 Tripterygium wilfordii HOM05D005929 ORTHO05D007869 1.1e-234 817.0 712 63.8
CsaV3_6G043190 Cucumis sativus L. HOM05D005929 ORTHO05D007869 1.4e-234 816.6 704 63.8
MBI06_g04503_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D007869 1.4e-234 816.6 735 61.4
EL10Ac6g15157 Beta vulgaris HOM05D005929 ORTHO05D007869 3.2e-234 815.5 729 61.2
TPR.G19031 Trifolium pratense HOM05D005929 ORTHO05D007869 3.2e-234 815.5 709 62.5
FvH4_1g15790 Fragaria vesca HOM05D005929 ORTHO05D007869 4.2e-234 815.1 715 61.5
FAN26G1042 Fragaria x ananassa HOM05D005929 ORTHO05D007869 5.5e-234 814.7 715 61.5
Thecc.01G053700 Theobroma cacao HOM05D005929 ORTHO05D007869 5.5e-234 814.7 711 63.3
FAN28G0152 Fragaria x ananassa HOM05D005929 ORTHO05D007869 7.2e-234 814.3 715 61.5
FAN19G1416 Fragaria x ananassa HOM05D005929 ORTHO05D007869 9.4e-234 813.9 715 61.4
MELO3C007555.2 Cucumis melo HOM05D005929 ORTHO05D007869 1.2e-233 813.5 708 63.4
CiPaw.01G019600 Carya illinoinensis HOM05D005929 ORTHO05D007869 6.1e-233 811.2 723 61.1
FAN23G0057 Fragaria x ananassa HOM05D005929 ORTHO05D007869 1.0e-232 810.4 725 60.3
Phvul.003G244900 Phaseolus vulgaris HOM05D005929 ORTHO05D007869 1.4e-232 810.1 710 61.5
MD02G1169700 Malus domestica HOM05D005929 ORTHO05D007869 2.3e-232 809.3 733 61.0
VMungo0251G2155 Vigna mungo HOM05D005929 ORTHO05D007869 1.1e-231 807.0 706 61.9
Sc03g0001480 Simmondsia chinensis HOM05D005929 ORTHO05D007869 1.5e-231 806.6 708 63.3
TWI53G1997 Tripterygium wilfordii HOM05D005929 ORTHO05D007869 1.5e-231 806.6 718 62.4
Ca_21176_v3 Cicer arietinum L. HOM05D005929 ORTHO05D007869 2.0e-231 806.2 708 61.6
Lj4g0006502 Lotus japonicus HOM05D005929 ORTHO05D007869 4.3e-231 805.1 710 61.7
Glyma.17G175900 Glycine max HOM05D005929 ORTHO05D007869 4.8e-230 801.6 715 60.4
Gorai.007G211400 Gossypium raimondii HOM05D005929 ORTHO05D007869 6.3e-230 801.2 712 61.9
Psat4g087280 Pisum sativum HOM05D005929 ORTHO05D007869 8.2e-230 800.8 706 61.8
Sed0025648 Sechium edule HOM05D005929 ORTHO05D007869 2.4e-229 799.3 715 62.4
Glyma.05G084300 Glycine max HOM05D005929 ORTHO05D007869 9.1e-229 797.3 714 60.6
Peaxi162Scf00964g00160 Petunia axillaris HOM05D005929 ORTHO05D007869 3.4e-228 795.4 724 61.2
Duzib147G0952 Durio zibethinus HOM05D005929 ORTHO05D007869 4.5e-228 795.0 712 62.6
Nitab4.5_0010605g0010 Nicotiana tabacum HOM05D005929 ORTHO05D007869 6.5e-227 791.2 726 60.1
PSO170G4100 Papaver somniferum HOM05D005929 ORTHO05D007869 8.5e-227 790.8 713 60.9
Gohir.A02G159200 Gossypium hirsutum HOM05D005929 ORTHO05D007869 1.4e-226 790.0 702 63.0
Gorai.003G022900 Gossypium raimondii HOM05D005929 ORTHO05D007869 1.9e-226 789.6 702 62.8
Gohir.D03G021300 Gossypium hirsutum HOM05D005929 ORTHO05D007869 4.2e-226 788.5 701 62.9
PGSC0003DMG400015776 Solanum tuberosum HOM05D005929 ORTHO05D007869 4.2e-226 788.5 721 60.9
CiPaw.02G008900 Carya illinoinensis HOM05D005929 ORTHO05D007869 1.2e-225 786.9 724 59.7
Solyc02g090650.4 Solanum lycopersicum HOM05D005929 ORTHO05D007869 1.6e-225 786.6 713 60.9
Gohir.A11G190800 Gossypium hirsutum HOM05D005929 ORTHO05D007869 2.7e-225 785.8 708 61.4
Lj4A143G78 Lonicera japonica HOM05D005929 ORTHO05D007869 3.6e-225 785.4 709 62.2
Sopen02g035300 Solanum pennellii HOM05D005929 ORTHO05D007869 4.7e-225 785.0 717 60.8
PSO210G3061 Papaver somniferum HOM05D005929 ORTHO05D007869 3.9e-224 781.9 713 60.2
Lsat_1_v5_gn_4_168021 Lactuca sativa HOM05D005929 ORTHO05D007869 1.1e-223 780.4 698 61.5
Hund13561 Selenicereus undatus HOM05D005929 ORTHO05D007869 1.5e-223 780.0 732 58.6
Gohir.D11G197600 Gossypium hirsutum HOM05D005929 ORTHO05D007869 1.3e-222 776.9 708 60.9
ECA232G2456 Erigeron canadensis HOM05D005929 ORTHO05D007869 4.1e-221 771.9 703 59.6
CAN.G836.71 Capsicum annuum HOM05D005929 ORTHO05D007869 3.5e-220 768.8 719 59.1
HanXRQChr15g0490721 Helianthus annuus HOM05D005929 ORTHO05D007869 6.5e-219 764.6 717 59.1
Rhsim08G0101600 Rhododendron simsii HOM05D005929 ORTHO05D007869 1.2e-217 760.4 939 49.2
Nitab4.5_0000310g0090 Nicotiana tabacum HOM05D005929 ORTHO05D007869 1.6e-217 760.0 728 58.7
Eucgr.H02007 Eucalyptus grandis HOM05D005929 ORTHO05D007869 4.7e-217 758.4 738 57.5
THA.LOC104821272 Tarenaya hassleriana HOM05D005929 ORTHO05D007869 8.8e-216 754.2 722 57.8
arahy.Tifrunner.gnm1.ann1.UKY0C7 Arachis hypogaea HOM05D005929 ORTHO05D007869 1.1e-213 747.3 799 53.1
Atru.chr3.351 Acer truncatum HOM05D005929 ORTHO05D007869 5.0e-211 738.4 631 62.8
HPP92_009382 Vanilla planifolia HOM05D005929 ORTHO05D007869 3.4e-207 725.7 718 57.5
Thhalv10003742m.g Eutrema salsugineum HOM05D005929 ORTHO05D007869 3.7e-206 722.2 717 56.3
Aa31LG1G15360 Aethionema arabicum HOM05D005929 ORTHO05D007869 1.3e-203 713.8 771 53.3
ATR0100G001 Amborella trichopoda HOM05D005929 ORTHO05D007869 1.3e-203 713.8 712 55.2
vmacro17944 Vaccinium macrocarpon HOM05D005929 ORTHO05D007869 6.5e-203 711.4 925 48.4
Sp2g29870 Schrenkiella parvula HOM05D005929 ORTHO05D007869 3.2e-202 709.1 719 55.5
Aqoxy5G01270 Aquilegia oxysepala HOM05D005929 ORTHO05D007869 2.1e-201 706.4 715 55.7
AL8G44640 Arabidopsis lyrata HOM05D005929 ORTHO05D007869 2.6e-199 699.5 727 55.0
Os10g0382300 Oryza sativa ssp. japonica HOM05D005929 ORTHO05D007869 4.4e-199 698.7 722 53.6
C07p24970 Brassica napus HOM05D005929 ORTHO05D007869 1.1e-197 694.1 718 55.0
BraA07t29438Z Brassica rapa HOM05D005929 ORTHO05D007869 2.4e-197 693.0 716 55.2
Carub.0008s2770 Capsella rubella HOM05D005929 ORTHO05D007869 9.1e-197 691.0 723 54.6
A07p17110 Brassica napus HOM05D005929 ORTHO05D007869 3.5e-196 689.1 717 55.1
BcaC06g34750 Brassica carinata HOM05D005929 ORTHO05D007869 1.3e-195 687.2 718 54.5
Hma1.2p1_0200F.1_g086000 Hydrangea macrophylla HOM05D005929 ORTHO05D007869 1.9e-194 683.3 567 65.6
Zm00001eb223840 Zea mays HOM05D005929 ORTHO05D007869 2.1e-193 679.9 725 52.0
BolC7t43027H Brassica oleracea HOM05D005929 ORTHO05D007869 8.9e-192 674.5 742 52.7
QL06p041881 Quercus lobata HOM05D005929 ORTHO05D007869 2.0e-191 673.3 598 61.2
BcaB02g09988 Brassica carinata HOM05D005929 ORTHO05D007869 7.5e-191 671.4 716 53.9
AUR62003860 Chenopodium quinoa HOM05D005929 ORTHO05D007869 2.7e-188 662.9 620 59.5
AUR62001947 Chenopodium quinoa HOM05D005929 ORTHO05D007869 6.8e-184 648.3 615 58.7
Ca_22183_v3 Cicer arietinum L. HOM05D005929 ORTHO05D007869 3.1e-168 596.3 573 57.8
Cpa.g.sc55.172 Carica papaya HOM05D005929 ORTHO05D007869 3.7e-166 589.3 558 60.2
Ah.03g144730 Amaranthus hybridus HOM05D005929 ORTHO05D007869 1.4e-165 587.4 593 55.8
Duzib264G1189 Durio zibethinus HOM05D005929 ORTHO05D007869 2.3e-163 580.1 709 50.6
CARHR280890 Cardamine hirsuta HOM05D005929 ORTHO05D007869 2.8e-153 546.6 593 53.1
Lalb_Chr09g0333751 Lupinus albus HOM05D005929 ORTHO05D007869 4.6e-148 529.3 530 56.4
AT5G66810 Arabidopsis thaliana HOM05D005929 ORTHO05D007869 4.2e-141 506.1 527 54.8
Pp3c4_14260 Physcomitrium patens HOM05D005929 ORTHO05D007869 7.4e-138 495.4 764 42.4
Mapoly0148s0013 Marchantia polymorpha HOM05D005929 ORTHO05D007869 2.6e-135 486.9 778 39.5
SMO116G0373 Selaginella moellendorffii HOM05D005929 ORTHO05D007869 4.8e-113 412.9 699 37.6
SalBow1G6022 Salvia bowleyana HOM05D005929 ORTHO05D007869 1.2e-111 408.3 291 73.5
CDE10G0678 Ceratophyllum demersum HOM05D005929 ORTHO05D007869 1.0e-94 352.1 263 68.4
CDE10G0504 Ceratophyllum demersum HOM05D005929 ORTHO05D007869 4.4e-90 336.7 450 48.2
Haze_15421 Corylus avellana HOM05D005929 ORTHO05D007869 1.1e-80 305.4 471 44.6
SEGI_10908 Sequoiadendron giganteum HOM05D005929 ORTHO05D000002 5.9e-79 299.7 432 44.0
Hma1.2p1_0200F.1_g086010 Hydrangea macrophylla HOM05D005929 ORTHO05D007869 8.0e-68 262.7 303 52.5
RcHm_v2.0_Chr7g0235891 Rosa chinensis HOM05D005929 ORTHO05D007869 1.3e-57 228.8 185 65.4
PSO782G4943 Papaver somniferum HOM05D005929 ORTHO05D007869 1.7e-54 218.4 181 63.0
DCAR_001419 Daucus carota HOM05D005929 ORTHO05D007869 3.0e-54 217.6 292 44.9
Dinv29975 Davidia involucrata HOM05D005929 ORTHO05D007869 8.6e-54 216.1 366 41.8
Lalb_Chr09g0333761 Lupinus albus HOM05D005929 ORTHO05D007869 3.5e-47 194.1 153 64.7
PSO339G4212 Papaver somniferum HOM05D005929 ORTHO05D007869 2.8e-44 184.5 154 61.0
QL06p041873 Quercus lobata HOM05D005929 ORTHO05D007869 6.0e-39 166.8 126 68.3
Cpa.g.sc55.170 Carica papaya HOM05D005929 ORTHO05D007869 2.1e-36 158.3 133 63.9
ATR0833G001 Amborella trichopoda HOM05D005929 ORTHO05D007869 3.8e-33 147.5 126 61.1
MD15G1282100 Malus domestica HOM05D005929 ORTHO05D007869 1.3e-28 132.5 91 69.2
MD15G1282000 Malus domestica HOM05D005929 ORTHO05D007869 2.4e-27 128.3 108 68.5
Lsat_1_v5_gn_2_14601 Lactuca sativa HOM05D005929 ORTHO05D029973 9.0e-27 126.3 147 52.4
MBI08_g05057_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D029973 3.9e-22 110.9 107 55.1
QL06p041946 Quercus lobata HOM05D005929 ORTHO05D007869 8.4e-17 93.2 150 38.7
Lsat_1_v5_gn_2_40080 Lactuca sativa HOM05D005929 ORTHO05D029973 1.6e-07 62.4 112 41.1
Cre01.g029050 Chlamydomonas reinhardtii HOM05D003178 ORTHO05D003636 4.6e-07 60.8 137 32.1
Migut.M01166 Erythranthe guttata HOM05D003178 ORTHO05D003636 1.0e-06 59.7 110 30.9
unitig_736.g22376 Utricularia gibba HOM05D005929 ORTHO05D425945 6.7e-06 57.0 71 52.1


User provided reference genes

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