Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold15G07238 Striga asiatica HOM05D005053 ORTHO05D006206 9.4e-89 330.1 159 100.0
Migut.H00475 Erythranthe guttata HOM05D005053 ORTHO05D006206 2.4e-44 182.6 245 47.8
Actinidia12070 Actinidia chinensis HOM05D005053 ORTHO05D006206 6.6e-42 174.5 248 46.0
Hma1.2p1_0687F.1_g203520 Hydrangea macrophylla HOM05D005053 ORTHO05D006206 1.1e-41 173.7 247 44.9
CSS0024932 Camellia sinensis var. sinensis HOM05D005053 ORTHO05D006206 7.3e-41 171.0 248 45.2
Cc07_g05640 Coffea canephora HOM05D005053 ORTHO05D006206 9.5e-41 170.6 248 45.2
Oeu004887.1 Olea europaea HOM05D005053 ORTHO05D006206 9.5e-41 170.6 245 45.7
Actinidia36514 Actinidia chinensis HOM05D005053 ORTHO05D006206 2.8e-40 169.1 248 45.6
unitig_736.g22369 Utricularia gibba HOM05D005053 ORTHO05D006206 3.6e-40 168.7 247 44.9
HanXRQChr14g0448331 Helianthus annuus HOM05D005053 ORTHO05D006206 4.7e-40 168.3 248 44.4
Dinv29944 Davidia involucrata HOM05D005053 ORTHO05D006206 6.2e-40 167.9 139 64.7
HanXRQChr07g0199901 Helianthus annuus HOM05D005053 ORTHO05D006206 6.2e-40 167.9 248 44.0
Lsat_1_v5_gn_2_86920 Lactuca sativa HOM05D005053 ORTHO05D006206 6.2e-40 167.9 248 44.0
vmacro17912 Vaccinium macrocarpon HOM05D005053 ORTHO05D006206 1.1e-39 167.2 248 42.7
Atru.chr3.440 Acer truncatum HOM05D005053 ORTHO05D006206 5.2e-39 164.9 247 43.7
MSTRG.15402 Avicennia marina HOM05D005053 ORTHO05D006206 5.2e-39 164.9 257 42.8
ECA238G1636 Erigeron canadensis HOM05D005053 ORTHO05D006206 6.8e-39 164.5 248 43.5
Cpa.g.sc6.408 Carica papaya HOM05D005053 ORTHO05D006206 8.9e-39 164.1 246 43.5
PGR102G2816 Punica granatum HOM05D005053 ORTHO05D006206 1.5e-38 163.3 248 43.1
CAN.G470.7 Capsicum annuum HOM05D005053 ORTHO05D006206 2.6e-38 162.5 247 42.1
MD15G1276200 Malus domestica HOM05D005053 ORTHO05D006206 2.6e-38 162.5 246 43.5
SGA_v2.0_scaffold204G41608 Striga asiatica HOM05D005053 ORTHO05D006206 2.6e-38 162.5 248 44.0
SGA_v2.0_scaffold27G11440 Striga asiatica HOM05D005053 ORTHO05D006206 2.6e-38 162.5 248 44.0
Phvul.003G248000 Phaseolus vulgaris HOM05D005053 ORTHO05D006206 3.4e-38 162.2 248 42.3
arahy.Tifrunner.gnm1.ann1.IMYE37 Arachis hypogaea HOM05D005053 ORTHO05D006206 4.4e-38 161.8 248 43.1
Lalb_Chr09g0333681 Lupinus albus HOM05D005053 ORTHO05D006206 5.8e-38 161.4 248 42.3
Sed0021889 Sechium edule HOM05D005053 ORTHO05D006206 5.8e-38 161.4 249 43.4
VMungo0251G0766 Vigna mungo HOM05D005053 ORTHO05D006206 5.8e-38 161.4 247 42.1
AUR62001971 Chenopodium quinoa HOM05D005053 ORTHO05D006206 7.5e-38 161.0 246 42.3
Ca_22210_v3 Cicer arietinum L. HOM05D005053 ORTHO05D006206 7.5e-38 161.0 248 41.5
Glyma.17G180900 Glycine max HOM05D005053 ORTHO05D006206 7.5e-38 161.0 248 41.9
COL.COLO4_11341 Corchorus olitorius HOM05D005053 ORTHO05D006206 9.8e-38 160.6 247 42.1
Manes.13G129200 Manihot esculenta HOM05D005053 ORTHO05D006206 9.8e-38 160.6 247 42.5
Aqoxy6G00906 Aquilegia oxysepala HOM05D005053 ORTHO05D006206 1.3e-37 160.2 248 42.7
arahy.Tifrunner.gnm1.ann1.VE46QQ Arachis hypogaea HOM05D005053 ORTHO05D006206 1.7e-37 159.8 248 42.7
EL10Ac6g15144 Beta vulgaris HOM05D005053 ORTHO05D006206 1.7e-37 159.8 246 42.3
Medtr8g079240 Medicago truncatula HOM05D005053 ORTHO05D006206 1.7e-37 159.8 248 41.9
Thecc.01G049700 Theobroma cacao HOM05D005053 ORTHO05D006206 1.7e-37 159.8 248 41.9
Nitab4.5_0000806g0140 Nicotiana tabacum HOM05D005053 ORTHO05D006206 2.2e-37 159.5 247 41.3
Hund13583 Selenicereus undatus HOM05D005053 ORTHO05D006206 2.2e-37 159.5 247 42.5
Lj4g0026236 Lotus japonicus HOM05D005053 ORTHO05D006206 2.9e-37 159.1 248 41.5
MD02G1163200 Malus domestica HOM05D005053 ORTHO05D006206 2.9e-37 159.1 249 42.2
GSVIVG01005060001 Vitis vinifera HOM05D005053 ORTHO05D006206 3.7e-37 158.7 248 42.3
ClCG01G016600 Citrullus lanatus HOM05D005053 ORTHO05D006206 4.9e-37 158.3 250 42.0
RcHm_v2.0_Chr2g0104011 Rosa chinensis HOM05D005053 ORTHO05D006206 4.9e-37 158.3 249 42.2
MELO3C007534.2 Cucumis melo HOM05D005053 ORTHO05D006206 6.4e-37 157.9 250 41.6
Gorai.008G072800 Gossypium raimondii HOM05D005053 ORTHO05D006206 6.4e-37 157.9 247 41.7
Solyc02g065180.3 Solanum lycopersicum HOM05D005053 ORTHO05D006206 6.4e-37 157.9 247 41.7
Sopen02g015310 Solanum pennellii HOM05D005053 ORTHO05D006206 6.4e-37 157.9 247 41.7
CsaV3_6G042980 Cucumis sativus L. HOM05D005053 ORTHO05D006206 1.1e-36 157.1 250 41.6
FvH4_1g14960 Fragaria vesca HOM05D005053 ORTHO05D006206 2.4e-36 156.0 250 42.4
Peaxi162Scf00993g00120 Petunia axillaris HOM05D005053 ORTHO05D006206 2.4e-36 156.0 139 59.7
FAN26G1713 Fragaria x ananassa HOM05D005053 ORTHO05D006206 5.4e-36 154.8 250 42.0
QL06p043337 Quercus lobata HOM05D005053 ORTHO05D006206 5.4e-36 154.8 139 59.0
AUR62003832 Chenopodium quinoa HOM05D005053 ORTHO05D006206 7.1e-36 154.5 139 59.0
FAN23G1215 Fragaria x ananassa HOM05D005053 ORTHO05D006206 7.1e-36 154.5 250 41.6
Peaxi162Scf00049g01010 Petunia axillaris HOM05D005053 ORTHO05D006206 7.1e-36 154.5 139 57.6
THA.LOC104819229 Tarenaya hassleriana HOM05D005053 ORTHO05D006206 7.1e-36 154.5 246 40.2
TAR628G0491 Trochodendron aralioides HOM05D005053 ORTHO05D006206 1.2e-35 153.7 139 60.4
Gohir.A12G069100 Gossypium hirsutum HOM05D005053 ORTHO05D006206 1.6e-35 153.3 139 59.0
Gohir.D12G090200 Gossypium hirsutum HOM05D005053 ORTHO05D006206 1.6e-35 153.3 139 59.0
Potri.007G037800 Populus trichocarpa HOM05D005053 ORTHO05D006206 1.6e-35 153.3 247 41.7
THA.LOC104821262 Tarenaya hassleriana HOM05D005053 ORTHO05D006206 1.6e-35 153.3 247 40.5
Carub.0008s2757 Capsella rubella HOM05D005053 ORTHO05D006206 2.7e-35 152.5 246 40.2
FAN19G0163 Fragaria x ananassa HOM05D005053 ORTHO05D006206 2.7e-35 152.5 250 41.6
Ca_22228_v3 Cicer arietinum L. HOM05D005053 ORTHO05D006206 4.6e-35 151.8 139 56.1
Nitab4.5_0009901g0010 Nicotiana tabacum HOM05D005053 ORTHO05D006206 4.6e-35 151.8 139 56.8
Sc03g0001310 Simmondsia chinensis HOM05D005053 ORTHO05D006206 4.6e-35 151.8 234 42.3
AL8G44450 Arabidopsis lyrata HOM05D005053 ORTHO05D006206 6.0e-35 151.4 246 39.8
PSO675G4006 Papaver somniferum HOM05D005053 ORTHO05D006206 6.0e-35 151.4 247 40.9
CARHR280750 Cardamine hirsuta HOM05D005053 ORTHO05D006206 1.0e-34 150.6 246 39.8
PSO541G4895 Papaver somniferum HOM05D005053 ORTHO05D006206 1.0e-34 150.6 247 40.9
Eucgr.H01988 Eucalyptus grandis HOM05D005053 ORTHO05D006206 1.3e-34 150.2 248 39.9
FAN28G1734 Fragaria x ananassa HOM05D005053 ORTHO05D006206 1.3e-34 150.2 251 41.8
Nn6g32115 Nelumbo nucifera HOM05D005053 ORTHO05D006206 1.7e-34 149.8 235 43.0
Aa31LG1G15480 Aethionema arabicum HOM05D005053 ORTHO05D006206 2.3e-34 149.4 246 39.4
Haze_15460 Corylus avellana HOM05D005053 ORTHO05D006206 3.0e-34 149.1 140 58.6
ATR0225G009 Amborella trichopoda HOM05D005053 ORTHO05D006206 3.9e-34 148.7 237 40.1
Ciclev10026393m.g Citrus clementina HOM05D005053 ORTHO05D006206 3.9e-34 148.7 265 40.0
Thhalv10005270m.g Eutrema salsugineum HOM05D005053 ORTHO05D006206 3.9e-34 148.7 236 39.8
TAR376G0500 Trochodendron aralioides HOM05D005053 ORTHO05D006206 3.9e-34 148.7 248 41.5
Ah.02g124120 Amaranthus hybridus HOM05D005053 ORTHO05D006206 8.6e-34 147.5 236 39.8
SEGI_13826 Sequoiadendron giganteum HOM05D005053 ORTHO05D006206 1.1e-33 147.1 247 39.3
BcaB04g20086 Brassica carinata HOM05D005053 ORTHO05D006206 1.9e-33 146.4 139 54.7
Cfa003962 Carpinus fangiana HOM05D005053 ORTHO05D006206 1.9e-33 146.4 249 39.8
Lj7A44T18 Lonicera japonica HOM05D005053 ORTHO05D006206 2.5e-33 146.0 115 68.7
MBI16_g19902_MAGBIO Magnolia biondii HOM05D005053 ORTHO05D006206 2.5e-33 146.0 140 57.9
AT5G66930 Arabidopsis thaliana HOM05D005053 ORTHO05D006206 7.3e-33 144.4 246 39.4
TWI53G1273 Tripterygium wilfordii HOM05D005053 ORTHO05D006206 7.3e-33 144.4 139 56.8
BcaC04g23174 Brassica carinata HOM05D005053 ORTHO05D006206 1.6e-32 143.3 139 53.2
C09p11390 Brassica napus HOM05D005053 ORTHO05D006206 1.6e-32 143.3 139 53.2
BolC9t54027H Brassica oleracea HOM05D005053 ORTHO05D006206 1.6e-32 143.3 139 53.2
Sabra07G0034100 Salix brachista HOM05D005053 ORTHO05D006206 1.6e-32 143.3 139 57.6
TWI09G0689 Tripterygium wilfordii HOM05D005053 ORTHO05D006206 1.6e-32 143.3 139 56.8
Duzib264G0045 Durio zibethinus HOM05D005053 ORTHO05D006206 4.7e-32 141.7 139 54.0
Mapoly0011s0084 Marchantia polymorpha HOM05D005053 ORTHO05D006206 4.7e-32 141.7 243 39.1
Rhsim08G0104900 Rhododendron simsii HOM05D005053 ORTHO05D006206 4.7e-32 141.7 176 45.5
RhsimUnG0070600 Rhododendron simsii HOM05D005053 ORTHO05D006206 4.7e-32 141.7 166 46.4
Sp2g29730 Schrenkiella parvula HOM05D005053 ORTHO05D006206 4.7e-32 141.7 246 37.8
Duzib264G0685 Durio zibethinus HOM05D005053 ORTHO05D006206 8.1e-32 141.0 139 54.0
Dinv39902 Davidia involucrata HOM05D005053 ORTHO05D006206 1.1e-31 140.6 115 64.3
A09p09640 Brassica napus HOM05D005053 ORTHO05D006206 1.4e-31 140.2 139 53.2
BraA09t36613Z Brassica rapa HOM05D005053 ORTHO05D006206 1.8e-31 139.8 139 52.5
Duzib147G0596 Durio zibethinus HOM05D005053 ORTHO05D006206 3.1e-31 139.0 139 54.7
CiPaw.01G025900 Carya illinoinensis HOM05D005053 ORTHO05D006206 6.8e-31 137.9 225 41.8
DCAR_025697 Daucus carota HOM05D005053 ORTHO05D006206 5.8e-30 134.8 115 62.6
CDE02G0556 Ceratophyllum demersum HOM05D005053 ORTHO05D006206 7.6e-30 134.4 128 57.0
PGSC0003DMG400010070 Solanum tuberosum HOM05D005053 ORTHO05D006206 7.6e-30 134.4 139 51.1
Nitab4.5_0002157g0070 Nicotiana tabacum HOM05D005053 ORTHO05D006206 1.3e-29 133.7 115 63.5
HPP92_024294 Vanilla planifolia HOM05D005053 ORTHO05D006206 3.7e-29 132.1 127 55.9
HPP92_024303 Vanilla planifolia HOM05D005053 ORTHO05D006206 3.7e-29 132.1 127 55.9
BcaC06g34767 Brassica carinata HOM05D005053 ORTHO05D006206 4.9e-29 131.7 139 51.1
C07p24820 Brassica napus HOM05D005053 ORTHO05D006206 4.9e-29 131.7 139 51.1
BolC7t43007H Brassica oleracea HOM05D005053 ORTHO05D006206 4.9e-29 131.7 129 52.7
Nn5g29376 Nelumbo nucifera HOM05D005053 ORTHO05D006206 6.4e-29 131.3 248 38.3
Solyc02g090330.3 Solanum lycopersicum HOM05D005053 ORTHO05D006206 8.4e-29 131.0 139 48.9
BcaB02g09970 Brassica carinata HOM05D005053 ORTHO05D006206 1.1e-28 130.6 139 51.8
SMO271G0126 Selaginella moellendorffii HOM05D005053 ORTHO05D006206 1.9e-28 129.8 247 36.4
BraA07t29424Z Brassica rapa HOM05D005053 ORTHO05D006206 7.1e-28 127.9 139 49.6
A07p16970 Brassica napus HOM05D005053 ORTHO05D006206 1.6e-27 126.7 139 48.9
Pp3c11_5110 Physcomitrium patens HOM05D005053 ORTHO05D006206 1.3e-26 123.6 139 49.6
TPR.G40637 Trifolium pratense HOM05D005053 ORTHO05D006206 3.0e-26 122.5 122 54.1
Os12g0446700 Oryza sativa ssp. japonica HOM05D005053 ORTHO05D006206 3.9e-26 122.1 139 46.0
FAN19G1388 Fragaria x ananassa HOM05D005053 ORTHO05D006206 1.9e-25 119.8 99 59.6
BcaC03g18393 Brassica carinata HOM05D005053 ORTHO05D006206 3.3e-25 119.0 135 47.4
C02p64670 Brassica napus HOM05D005053 ORTHO05D006206 3.3e-25 119.0 135 47.4
BolC2t12528H Brassica oleracea HOM05D005053 ORTHO05D006206 3.3e-25 119.0 135 47.4
Os12g0428200 Oryza sativa ssp. japonica HOM05D005053 ORTHO05D006206 9.6e-25 117.5 139 45.3
Zm00001eb184240 Zea mays HOM05D005053 ORTHO05D006206 9.6e-25 117.5 139 45.3
AagrBONN_evm.TU.Sc2ySwM_344.1821 Anthoceros agrestis HOM05D005053 ORTHO05D006206 2.1e-24 116.3 215 38.1
AagrBONN_evm.TU.Sc2ySwM_344.1822 Anthoceros agrestis HOM05D005053 ORTHO05D006206 1.5e-22 110.2 142 44.4
CBR_g23008 Chara braunii HOM05D005053 ORTHO05D006206 5.8e-22 108.2 139 45.3
Nitab4.5_0003750g0060 Nicotiana tabacum HOM05D005053 ORTHO05D006206 5.4e-20 101.7 67 74.6
Psat4g089040 Pisum sativum HOM05D005053 ORTHO05D006206 2.1e-19 99.8 128 43.0
CiPaw.02G011700 Carya illinoinensis HOM05D005053 ORTHO05D006206 2.3e-18 96.3 190 35.3
AagrBONN_evm.TU.Sc2ySwM_369.468 Anthoceros agrestis HOM05D000050 ORTHO05D000771 5.1e-18 95.1 212 31.1
Zm00001eb184160 Zea mays HOM05D005053 ORTHO05D006206 1.9e-17 93.2 104 48.1
Cre07.g334700 Chlamydomonas reinhardtii HOM05D005053 ORTHO05D006206 2.8e-16 89.4 128 40.6
Prupe.7G140800 Prunus persica HOM05D005053 ORTHO05D006206 2.4e-15 86.3 172 37.2
Psat4g088960 Pisum sativum HOM05D005053 ORTHO05D006206 1.5e-14 83.6 166 36.7
Sopen02g035010 Solanum pennellii HOM05D005053 ORTHO05D006206 1.5e-14 83.6 67 58.2
Ah.03g144090 Amaranthus hybridus HOM05D005053 ORTHO05D006206 3.4e-14 82.4 162 37.7
MCO07G250 Micromonas commoda HOM05D005053 ORTHO05D006206 2.7e-11 72.8 127 34.6


User provided reference genes

Program Settings