Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold15G07225 Striga asiatica HOM05D001549 ORTHO05D405161 1.2e-160 569.7 273 100.0
SGA_v2.0_scaffold204G41617 Striga asiatica HOM05D001549 ORTHO05D003098 6.4e-29 132.1 478 27.2
Migut.H00490 Erythranthe guttata HOM05D001549 ORTHO05D003098 1.4e-20 104.4 475 24.6
Migut.L00820 Erythranthe guttata HOM05D001549 ORTHO05D003098 4.3e-17 92.8 218 30.3
Migut.L00243 Erythranthe guttata HOM05D001549 ORTHO05D003098 9.6e-17 91.7 218 30.3
SalBow1G8516 Salvia bowleyana HOM05D001549 ORTHO05D003098 3.7e-16 89.7 221 30.8
Oeu021854.1 Olea europaea HOM05D001549 ORTHO05D003098 4.1e-15 86.3 215 31.6
FAN26G1027 Fragaria x ananassa HOM05D001549 ORTHO05D003098 3.8e-13 79.7 323 26.3
FAN23G0473 Fragaria x ananassa HOM05D001549 ORTHO05D003098 5.5e-12 75.9 357 24.9
Manes.13G130700 Manihot esculenta HOM05D001549 ORTHO05D003098 9.3e-12 75.1 180 32.8
Potri.007G035900 Populus trichocarpa HOM05D001549 ORTHO05D003098 3.5e-11 73.2 89 44.9
QL06p043875 Quercus lobata HOM05D001549 ORTHO05D003098 7.9e-11 72.0 224 29.0
Sabra07G0031400 Salix brachista HOM05D001549 ORTHO05D003098 7.9e-11 72.0 90 46.7
TAR628G1517 Trochodendron aralioides HOM05D001549 ORTHO05D003098 1.3e-10 71.2 89 46.1
Nn5g29397 Nelumbo nucifera HOM05D001549 ORTHO05D003098 1.8e-10 70.9 66 48.5
Aqoxy6G00926 Aquilegia oxysepala HOM05D001549 ORTHO05D003098 3.0e-10 70.1 66 51.5
CiPaw.01G027000 Carya illinoinensis HOM05D001549 ORTHO05D003098 3.9e-10 69.7 88 45.5
FAN28G2359 Fragaria x ananassa HOM05D001549 ORTHO05D003098 8.7e-10 68.6 328 25.6
Peaxi162Scf00535g00733 Petunia axillaris HOM05D001549 ORTHO05D003098 8.7e-10 68.6 218 25.7
unitig_21.g20533 Utricularia gibba HOM05D001549 ORTHO05D003098 1.1e-09 68.2 191 28.3
Haze_15180 Corylus avellana HOM05D001549 ORTHO05D003098 4.3e-09 66.2 66 51.5
FAN19G2984 Fragaria x ananassa HOM05D001549 ORTHO05D003098 4.3e-09 66.2 328 24.7
PGR042G3280 Punica granatum HOM05D001549 ORTHO05D003098 4.3e-09 66.2 89 41.6
HanXRQChr09g0264421 Helianthus annuus HOM05D001549 ORTHO05D003098 5.7e-09 65.9 90 44.4
Actinidia12081 Actinidia chinensis HOM05D001549 ORTHO05D003098 7.4e-09 65.5 89 41.6
Dinv39910 Davidia involucrata HOM05D001549 ORTHO05D003098 7.4e-09 65.5 89 42.7
GSVIVG01005084001 Vitis vinifera HOM05D001549 ORTHO05D003098 7.4e-09 65.5 66 50.0
Cc07_g05500 Coffea canephora HOM05D001549 ORTHO05D003098 9.7e-09 65.1 67 52.2
Solyc02g090180.3 Solanum lycopersicum HOM05D001549 ORTHO05D003098 9.7e-09 65.1 66 45.5
Sopen02g034870 Solanum pennellii HOM05D001549 ORTHO05D003098 9.7e-09 65.1 66 45.5
PGSC0003DMG400010077 Solanum tuberosum HOM05D001549 ORTHO05D003098 9.7e-09 65.1 66 45.5
Cpa.g.sc15.91 Carica papaya HOM05D001549 ORTHO05D003098 1.3e-08 64.7 89 39.3
Lsat_1_v5_gn_2_90341 Lactuca sativa HOM05D001549 ORTHO05D003098 1.3e-08 64.7 134 36.6
Lsat_1_v5_gn_4_177661 Lactuca sativa HOM05D001549 ORTHO05D003098 1.3e-08 64.7 89 40.4
FvH4_1g14740 Fragaria vesca HOM05D001549 ORTHO05D003098 1.6e-08 64.3 66 50.0
Nitab4.5_0000108g0230 Nicotiana tabacum HOM05D001549 ORTHO05D003098 2.2e-08 63.9 115 38.3
TWI73G0625 Tripterygium wilfordii HOM05D001549 ORTHO05D003098 2.8e-08 63.5 89 41.6
RcHm_v2.0_Chr1g0319111 Rosa chinensis HOM05D001549 ORTHO05D003098 3.7e-08 63.2 66 47.0
CAN.G836.28 Capsicum annuum HOM05D001549 ORTHO05D003098 4.8e-08 62.8 66 42.4
Ciclev10024926m.g Citrus clementina HOM05D001549 ORTHO05D003098 4.8e-08 62.8 89 40.4
arahy.Tifrunner.gnm1.ann1.WXMK30 Arachis hypogaea HOM05D001549 ORTHO05D003098 8.2e-08 62.0 89 39.3
Cfa004221 Carpinus fangiana HOM05D001549 ORTHO05D003098 8.2e-08 62.0 66 47.0
Nitab4.5_0001014g0130 Nicotiana tabacum HOM05D001549 ORTHO05D003098 8.2e-08 62.0 66 43.9
vmacro08939 Vaccinium macrocarpon HOM05D001549 ORTHO05D003098 1.1e-07 61.6 89 39.3
ATR0733G205 Amborella trichopoda HOM05D001549 ORTHO05D003098 1.8e-07 60.8 149 29.5
SGA_v2.0_scaffold55G19763 Striga asiatica HOM05D023255 ORTHO05D400439 1.8e-07 60.8 38 78.9
ECA232G4408 Erigeron canadensis HOM05D001549 ORTHO05D003098 2.4e-07 60.5 89 39.3
arahy.Tifrunner.gnm1.ann1.NDG4UC Arachis hypogaea HOM05D001549 ORTHO05D003098 3.1e-07 60.1 89 38.2
Duzib264G0623 Durio zibethinus HOM05D001549 ORTHO05D003098 3.1e-07 60.1 88 42.0
Atru.chr3.453 Acer truncatum HOM05D001549 ORTHO05D003098 4.1e-07 59.7 89 39.3
CSS0023079 Camellia sinensis var. sinensis HOM05D001549 ORTHO05D003098 4.1e-07 59.7 89 39.3
MBI16_g19886_MAGBIO Magnolia biondii HOM05D001549 ORTHO05D003098 4.1e-07 59.7 89 40.4
Psat4g089680 Pisum sativum HOM05D001549 ORTHO05D003098 4.1e-07 59.7 89 37.1
ClCG02G017060 Citrullus lanatus HOM05D001549 ORTHO05D003098 5.3e-07 59.3 461 21.5
DCAR_025681 Daucus carota HOM05D001549 ORTHO05D003098 5.3e-07 59.3 89 36.0
Medtr8g079030 Medicago truncatula HOM05D001549 ORTHO05D003098 5.3e-07 59.3 89 37.1
RcHm_v2.0_Chr2g0103681 Rosa chinensis HOM05D001549 ORTHO05D003098 5.3e-07 59.3 66 45.5
Thhalv10003673m.g Eutrema salsugineum HOM05D001549 ORTHO05D003098 6.9e-07 58.9 89 40.4
Gohir.A11G045300 Gossypium hirsutum HOM05D001549 ORTHO05D003098 6.9e-07 58.9 88 40.9
Gohir.D11G048800 Gossypium hirsutum HOM05D001549 ORTHO05D003098 6.9e-07 58.9 88 40.9
Ah.03g144010 Amaranthus hybridus HOM05D001549 ORTHO05D003098 9.0e-07 58.5 66 43.9
Lj4C136G10 Lonicera japonica HOM05D001549 ORTHO05D003098 9.0e-07 58.5 156 28.8
Lalb_Chr16g0388481 Lupinus albus HOM05D001549 ORTHO05D003098 9.0e-07 58.5 66 42.4
MD15G1274800 Malus domestica HOM05D001549 ORTHO05D003098 1.2e-06 58.2 66 45.5
CARHR280720 Cardamine hirsuta HOM05D001549 ORTHO05D003098 2.0e-06 57.4 97 38.1
CsaV3_2G003710 Cucumis sativus L. HOM05D001549 ORTHO05D003098 2.0e-06 57.4 66 45.5
Gorai.007G052400 Gossypium raimondii HOM05D001549 ORTHO05D003098 2.0e-06 57.4 88 39.8
Rhsim10G0125500 Rhododendron simsii HOM05D001549 ORTHO05D003098 2.6e-06 57.0 89 39.3
MELO3C004423.2 Cucumis melo HOM05D001549 ORTHO05D003098 3.4e-06 56.6 66 43.9
Lj4g0010242 Lotus japonicus HOM05D001549 ORTHO05D003098 3.4e-06 56.6 66 42.4
TPR.G30330 Trifolium pratense HOM05D001549 ORTHO05D003098 3.4e-06 56.6 89 34.8
VMungo0738G0001 Vigna mungo HOM05D001549 ORTHO05D003098 3.4e-06 56.6 220 25.0
Aa31LG1G15510 Aethionema arabicum HOM05D001549 ORTHO05D003098 4.5e-06 56.2 219 25.1
Sp2g29700 Schrenkiella parvula HOM05D001549 ORTHO05D003098 4.5e-06 56.2 94 38.3
BraA09t36610Z Brassica rapa HOM05D001549 ORTHO05D003098 5.9e-06 55.8 94 39.4
CANSAT01G2865 Cannabis sativa HOM05D001549 ORTHO05D003098 5.9e-06 55.8 90 38.9
PSO675G5453 Papaver somniferum HOM05D001549 ORTHO05D003098 5.9e-06 55.8 223 24.7
Prupe.7G143000 Prunus persica HOM05D001549 ORTHO05D003098 7.7e-06 55.5 66 43.9
Sed0004252 Sechium edule HOM05D001549 ORTHO05D003098 7.7e-06 55.5 72 41.7


User provided reference genes

Program Settings