Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold15G07210 Striga asiatica HOM05D008334 ORTHO05D010366 3.9e-48 194.5 100 100.0
Migut.H00500 Erythranthe guttata HOM05D008334 ORTHO05D010366 6.7e-16 87.4 107 51.4
Nitab4.5_0001014g0160 Nicotiana tabacum HOM05D008334 ORTHO05D010366 5.6e-15 84.3 105 51.4
Oeu032927.1 Olea europaea HOM05D008334 ORTHO05D010366 9.0e-13 77.0 106 49.1
Cfa004229 Carpinus fangiana HOM05D008334 ORTHO05D010366 1.7e-11 72.8 105 47.6
PGSC0003DMG400010112 Solanum tuberosum HOM05D008334 ORTHO05D010366 1.7e-11 72.8 101 46.5
Sabra05G0106400 Salix brachista HOM05D008334 ORTHO05D010366 2.2e-11 72.4 103 39.8
Sopen02g034820 Solanum pennellii HOM05D008334 ORTHO05D010366 6.5e-11 70.9 92 46.7
CAN.G836.22 Capsicum annuum HOM05D008334 ORTHO05D012551 8.4e-11 70.5 104 46.2
Haze_15171 Corylus avellana HOM05D008334 ORTHO05D010366 8.4e-11 70.5 106 45.3
Peaxi162Scf00535g00717 Petunia axillaris HOM05D008334 ORTHO05D010366 1.1e-10 70.1 105 44.8
COL.COLO4_22186 Corchorus olitorius HOM05D008334 ORTHO05D010366 2.5e-10 68.9 113 41.6
Prupe.7G144900 Prunus persica HOM05D008334 ORTHO05D010366 4.2e-10 68.2 107 48.6
Nitab4.5_0000108g0210 Nicotiana tabacum HOM05D008334 ORTHO05D010366 9.3e-10 67.0 94 47.9
Prupe.7G144800 Prunus persica HOM05D008334 ORTHO05D010366 1.6e-09 66.2 107 47.7
Lj2g0004238 Lotus japonicus HOM05D008334 ORTHO05D010366 2.7e-09 65.5 85 47.1
Dinv26771 Davidia involucrata HOM05D004524 ORTHO05D005477 3.5e-09 65.1 94 43.6
Potri.005G131000 Populus trichocarpa HOM05D008334 ORTHO05D010366 3.5e-09 65.1 103 35.9
Thecc.01G046100 Theobroma cacao HOM05D008334 ORTHO05D010366 3.5e-09 65.1 109 42.2
Manes.13G131800 Manihot esculenta HOM05D008334 ORTHO05D010366 6.0e-09 64.3 108 39.8
Ciclev10026829m.g Citrus clementina HOM05D008334 ORTHO05D010366 1.0e-08 63.5 111 43.2
CiPaw.01G028200 Carya illinoinensis HOM05D008334 ORTHO05D010366 1.3e-08 63.2 106 44.3
Duzib147G0108 Durio zibethinus HOM05D008334 ORTHO05D010366 1.3e-08 63.2 108 41.7
Lalb_Chr05g0226961 Lupinus albus HOM05D008334 ORTHO05D010366 1.3e-08 63.2 102 45.1
TAR381G1599 Trochodendron aralioides HOM05D008210 ORTHO05D010078 2.3e-08 62.4 103 38.8
Rhsim08G0109000 Rhododendron simsii HOM05D008334 ORTHO05D010366 3.0e-08 62.0 105 41.0
Potri.007G034700 Populus trichocarpa HOM05D008334 ORTHO05D010366 3.9e-08 61.6 103 44.7
RcHm_v2.0_Chr2g0103311 Rosa chinensis HOM05D008334 ORTHO05D010366 5.1e-08 61.2 113 42.5
Manes.12G094900 Manihot esculenta HOM05D008334 ORTHO05D010366 6.7e-08 60.8 104 40.4
Dinv39913 Davidia involucrata HOM05D008334 ORTHO05D010366 8.7e-08 60.5 84 52.4
Sopen02g034810 Solanum pennellii HOM05D033558 ORTHO05D010366 8.7e-08 60.5 100 44.0
Psat0s4220g0080 Pisum sativum HOM05D008334 ORTHO05D010366 1.1e-07 60.1 111 38.7
Solyc02g090120.1 Solanum lycopersicum HOM05D033558 ORTHO05D010366 1.1e-07 60.1 100 45.0
TPR.G29861 Trifolium pratense HOM05D008334 ORTHO05D010366 4.3e-07 58.2 106 39.6
Glyma.16G144100 Glycine max HOM05D008334 ORTHO05D010366 5.7e-07 57.8 110 39.1
Gohir.A11G045200 Gossypium hirsutum HOM05D008334 ORTHO05D010366 5.7e-07 57.8 109 37.6
Gohir.D11G048700 Gossypium hirsutum HOM05D008334 ORTHO05D010366 5.7e-07 57.8 109 37.6
Gorai.007G052300 Gossypium raimondii HOM05D008334 ORTHO05D010366 5.7e-07 57.8 109 37.6
TAR628G0004 Trochodendron aralioides HOM05D008210 ORTHO05D010078 7.4e-07 57.4 73 47.9
Medtr5g018540 Medicago truncatula HOM05D008334 ORTHO05D010366 1.3e-06 56.6 105 39.0
Cpa.g.sc15.75 Carica papaya HOM05D008334 ORTHO05D010366 1.6e-06 56.2 85 42.4
FAN19G2894 Fragaria x ananassa HOM05D008334 ORTHO05D010366 1.6e-06 56.2 115 40.0
Medtr8g078960 Medicago truncatula HOM05D008334 ORTHO05D010366 1.6e-06 56.2 111 39.6
Ah.02g126090 Amaranthus hybridus HOM05D010741 ORTHO05D012551 2.1e-06 55.8 89 46.1
Atru.chr3.465 Acer truncatum HOM05D008334 ORTHO05D010366 4.8e-06 54.7 113 34.5
FAN23G2256 Fragaria x ananassa HOM05D008334 ORTHO05D010366 4.8e-06 54.7 111 37.8
Atru.chr3.467 Acer truncatum HOM05D008334 ORTHO05D010366 6.2e-06 54.3 113 38.1
Haze_17600 Corylus avellana HOM05D008210 ORTHO05D010078 6.2e-06 54.3 104 36.5
DCAR_010943 Daucus carota HOM05D008334 ORTHO05D010366 6.2e-06 54.3 114 38.6
FvH4_1g14560 Fragaria vesca HOM05D008334 ORTHO05D010366 6.2e-06 54.3 115 39.1


User provided reference genes

Program Settings