Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold15G07205 Striga asiatica HOM05D007578 ORTHO05D009497 4.3e-57 224.9 162 100.0
MSTRG.23805 Avicennia marina HOM05D007578 ORTHO05D009497 3.4e-38 162.2 162 77.2
Oeu032922.1 Olea europaea HOM05D007578 ORTHO05D009497 4.7e-27 125.2 163 66.3
Nitab4.5_0000108g0140 Nicotiana tabacum HOM05D007578 ORTHO05D009497 1.0e-26 124.0 168 67.3
Nitab4.5_0007463g0020 Nicotiana tabacum HOM05D007578 ORTHO05D009497 1.4e-26 123.6 168 67.3
Cc07_g05400 Coffea canephora HOM05D007578 ORTHO05D009497 2.6e-25 119.4 167 67.1
Sabra07G0029900 Salix brachista HOM05D007578 ORTHO05D009497 8.2e-24 114.4 149 71.8
Migut.H00501 Erythranthe guttata HOM05D007578 ORTHO05D009497 1.4e-23 113.6 125 72.0
Manes.13G132100 Manihot esculenta HOM05D007578 ORTHO05D009497 4.1e-23 112.1 160 66.9
Sopen02g034790 Solanum pennellii HOM05D007578 ORTHO05D009497 5.9e-22 108.2 168 64.9
Potri.007G034300 Populus trichocarpa HOM05D007578 ORTHO05D009497 7.7e-22 107.8 169 65.1
Hma1.2p1_0261F.1_g104930 Hydrangea macrophylla HOM05D007578 ORTHO05D009497 3.8e-21 105.5 146 65.1
Psat0s4627g0160 Pisum sativum HOM05D007578 ORTHO05D009497 5.0e-21 105.1 130 72.3
Ca_24809_v3 Cicer arietinum L. HOM05D007578 ORTHO05D009497 8.5e-21 104.4 128 65.6
Solyc02g090100.1 Solanum lycopersicum HOM05D007578 ORTHO05D009497 8.5e-21 104.4 168 64.3
Lj4P136T24 Lonicera japonica HOM05D007578 ORTHO05D009497 1.1e-20 104.0 134 68.7
QL06p044247 Quercus lobata HOM05D007578 ORTHO05D009497 1.1e-20 104.0 171 62.0
TPR.G29848 Trifolium pratense HOM05D007578 ORTHO05D009497 1.1e-20 104.0 128 71.9
Prupe.7G145300 Prunus persica HOM05D007578 ORTHO05D009497 2.5e-20 102.8 163 67.5
Sed0003773 Sechium edule HOM05D007578 ORTHO05D009497 2.5e-20 102.8 162 64.8
CiPaw.01G029100 Carya illinoinensis HOM05D007578 ORTHO05D009497 3.2e-20 102.4 145 67.6
PGR102G1240 Punica granatum HOM05D007578 ORTHO05D009497 5.5e-20 101.7 171 63.7
Haze_15166 Corylus avellana HOM05D007578 ORTHO05D009497 7.2e-20 101.3 144 70.1
MD15G1273300 Malus domestica HOM05D007578 ORTHO05D009497 7.2e-20 101.3 143 72.0
CANSAT01G2356 Cannabis sativa HOM05D007578 ORTHO05D009497 1.2e-19 100.5 132 72.7
Ah.03g142130 Amaranthus hybridus HOM05D007578 ORTHO05D009497 1.6e-19 100.1 130 73.8
CAN.G836.20 Capsicum annuum HOM05D007578 ORTHO05D009497 1.6e-19 100.1 133 70.7
Thecc.01G045800 Theobroma cacao HOM05D007578 ORTHO05D009497 1.6e-19 100.1 133 72.2
Glyma.01G182600 Glycine max HOM05D007578 ORTHO05D009497 2.7e-19 99.4 148 69.6
Sc03g0001220 Simmondsia chinensis HOM05D007578 ORTHO05D009497 3.6e-19 99.0 163 52.8
Peaxi162Scf00535g00071 Petunia axillaris HOM05D007578 ORTHO05D009497 4.7e-19 98.6 164 57.9
THA.LOC104804219 Tarenaya hassleriana HOM05D007578 ORTHO05D009497 4.7e-19 98.6 152 69.1
CSS0031523 Camellia sinensis var. sinensis HOM05D007578 ORTHO05D009497 8.0e-19 97.8 152 65.1
CSS0032257 Camellia sinensis var. sinensis HOM05D007578 ORTHO05D009497 8.0e-19 97.8 152 65.1
Duzib147G1180 Durio zibethinus HOM05D007578 ORTHO05D009497 8.0e-19 97.8 164 62.8
Lalb_Chr16g0378091 Lupinus albus HOM05D007578 ORTHO05D009497 8.0e-19 97.8 133 66.2
Lalb_Chr16g0378311 Lupinus albus HOM05D007578 ORTHO05D009497 8.0e-19 97.8 133 66.2
PGSC0003DMG400037576 Solanum tuberosum HOM05D007578 ORTHO05D009497 1.0e-18 97.4 164 63.4
SalBow1G1613 Salvia bowleyana HOM05D007578 ORTHO05D009497 1.4e-18 97.1 131 69.5
COL.COLO4_22180 Corchorus olitorius HOM05D007578 ORTHO05D009497 2.3e-18 96.3 150 66.0
TAR628G0552 Trochodendron aralioides HOM05D007578 ORTHO05D009497 2.3e-18 96.3 171 64.3
C04p52990 Brassica napus HOM05D007578 ORTHO05D009497 3.0e-18 95.9 158 64.6
BolC4t26860H Brassica oleracea HOM05D007578 ORTHO05D009497 3.0e-18 95.9 158 64.6
Gohir.A02G161500 Gossypium hirsutum HOM05D007578 ORTHO05D009497 3.0e-18 95.9 142 58.5
AL4G13660 Arabidopsis lyrata HOM05D007578 ORTHO05D009497 4.0e-18 95.5 151 62.9
arahy.Tifrunner.gnm1.ann1.25C3YR Arachis hypogaea HOM05D007578 ORTHO05D009497 6.8e-18 94.7 133 69.9
Glyma.11G060900 Glycine max HOM05D007578 ORTHO05D009497 6.8e-18 94.7 134 71.6
Duzib264G1198 Durio zibethinus HOM05D007578 ORTHO05D009497 8.8e-18 94.4 133 66.2
Rhsim06G0070400 Rhododendron simsii HOM05D002920 ORTHO05D009497 8.8e-18 94.4 151 66.9
AT2G23670 Arabidopsis thaliana HOM05D007578 ORTHO05D009497 1.2e-17 94.0 158 63.3
arahy.Tifrunner.gnm1.ann1.UX6CPD Arachis hypogaea HOM05D007578 ORTHO05D009497 1.2e-17 94.0 133 69.2
A04p18050 Brassica napus HOM05D007578 ORTHO05D009497 1.5e-17 93.6 158 63.9
CsaV3_2G017140 Cucumis sativus L. HOM05D007578 ORTHO05D009497 1.5e-17 93.6 127 72.4
Gorai.003G019400 Gossypium raimondii HOM05D007578 ORTHO05D009497 1.5e-17 93.6 142 59.9
Medtr5g018590 Medicago truncatula HOM05D007578 ORTHO05D009497 1.5e-17 93.6 128 65.6
BraA04t17423Z Brassica rapa HOM05D007578 ORTHO05D009497 2.0e-17 93.2 158 63.3
MELO3C020917.2 Cucumis melo HOM05D007578 ORTHO05D009497 2.0e-17 93.2 126 73.0
CARHR114700 Cardamine hirsuta HOM05D007578 ORTHO05D009497 2.6e-17 92.8 158 62.7
DCAR_010946 Daucus carota HOM05D007578 ORTHO05D009497 2.6e-17 92.8 165 63.0
Sp4g02640 Schrenkiella parvula HOM05D007578 ORTHO05D009497 2.6e-17 92.8 152 65.8
EL10Ac6g14844 Beta vulgaris HOM05D007578 ORTHO05D009497 3.4e-17 92.4 168 54.2
AUR62027241 Chenopodium quinoa HOM05D003724 ORTHO05D009497 3.4e-17 92.4 139 69.1
Actinidia36527 Actinidia chinensis HOM05D007578 ORTHO05D009497 4.4e-17 92.0 166 62.7
Carub.0004s0288 Capsella rubella HOM05D007578 ORTHO05D009497 4.4e-17 92.0 158 63.3
Aa31LG7G13200 Aethionema arabicum HOM05D007578 ORTHO05D009497 7.5e-17 91.3 172 58.1
ClCG02G013060 Citrullus lanatus HOM05D007578 ORTHO05D009497 9.8e-17 90.9 142 66.9
TWI53G0440 Tripterygium wilfordii HOM05D007578 ORTHO05D009497 1.3e-16 90.5 166 62.0
BcaB06g27923 Brassica carinata HOM05D007578 ORTHO05D009497 2.8e-16 89.4 149 64.4
TAR376G0355 Trochodendron aralioides HOM05D007578 ORTHO05D009497 3.7e-16 89.0 168 62.5
Ciclev10026636m.g Citrus clementina HOM05D007578 ORTHO05D009497 4.8e-16 88.6 143 51.0
unitig_21.g20937 Utricularia gibba HOM05D000261 ORTHO05D001168 4.8e-16 88.6 156 57.7
Gohir.A11G045100 Gossypium hirsutum HOM05D007578 ORTHO05D009497 6.3e-16 88.2 140 65.0
Thhalv10000353m.g Eutrema salsugineum HOM05D007578 ORTHO05D009497 1.1e-15 87.4 153 61.4
MBI07_g23234_MAGBIO Magnolia biondii HOM05D007578 ORTHO05D009497 1.8e-15 86.7 170 57.6
Phvul.002G023600 Phaseolus vulgaris HOM05D007578 ORTHO05D009497 5.4e-15 85.1 134 66.4
MD02G1158500 Malus domestica HOM05D007578 ORTHO05D009497 9.1e-15 84.3 146 66.4
FAN23G2171 Fragaria x ananassa HOM05D007578 ORTHO05D009497 2.0e-14 83.2 159 56.0
Gohir.D03G019000 Gossypium hirsutum HOM05D007578 ORTHO05D009497 2.0e-14 83.2 133 59.4
FAN19G1163 Fragaria x ananassa HOM05D007578 ORTHO05D009497 3.5e-14 82.4 158 58.9
Gohir.D11G048600 Gossypium hirsutum HOM05D007578 ORTHO05D009497 3.5e-14 82.4 169 58.0
RcHm_v2.0_Chr2g0103251 Rosa chinensis HOM05D007578 ORTHO05D009497 3.5e-14 82.4 160 59.4
FAN26G3047 Fragaria x ananassa HOM05D007578 ORTHO05D009497 5.9e-14 81.6 158 55.7
Lsat_1_v5_gn_3_94000 Lactuca sativa HOM05D007578 ORTHO05D009497 5.9e-14 81.6 145 60.7
CDE11G1131 Ceratophyllum demersum HOM05D007578 ORTHO05D009497 7.7e-14 81.3 129 54.3
Dinv39922 Davidia involucrata HOM05D007578 ORTHO05D009497 7.7e-14 81.3 214 50.9
FvH4_1g14510 Fragaria vesca HOM05D007578 ORTHO05D009497 1.3e-13 80.5 158 55.1
Gorai.007G052200 Gossypium raimondii HOM05D007578 ORTHO05D009497 2.2e-13 79.7 169 57.4
HPP92_014833 Vanilla planifolia HOM05D007578 ORTHO05D009497 5.0e-13 78.6 137 47.4
Cpa.g.sc15.63 Carica papaya HOM05D007578 ORTHO05D009497 6.5e-13 78.2 149 57.7
Dinv26776 Davidia involucrata HOM05D007578 ORTHO05D009497 1.1e-12 77.4 150 57.3
Aqoxy2G01906 Aquilegia oxysepala HOM05D007578 ORTHO05D009497 3.6e-11 72.4 159 59.1
FAN28G2485 Fragaria x ananassa HOM05D007578 ORTHO05D009497 4.7e-11 72.0 103 69.9
Peaxi162Scf00150g00132 Petunia axillaris HOM05D007578 ORTHO05D009497 8.0e-11 71.2 109 67.0
CAN.G1525.2 Capsicum annuum HOM05D007578 ORTHO05D009497 1.8e-10 70.1 155 58.1
HanXRQChr12g0378461 Helianthus annuus HOM05D007578 ORTHO05D009497 5.2e-10 68.6 125 43.2
Atru.chr3.471 Acer truncatum HOM05D007578 ORTHO05D009497 3.4e-09 65.9 162 54.9
PSO170G5738 Papaver somniferum HOM05D007578 ORTHO05D009497 4.9e-08 62.0 161 45.3
ATR0787G067 Amborella trichopoda HOM05D007578 ORTHO05D009497 8.3e-08 61.2 155 41.9
ECA246G0471 Erigeron canadensis HOM05D007578 ORTHO05D009497 4.1e-07 58.9 114 52.6
PSO017G5052 Papaver somniferum HOM05D007578 ORTHO05D009497 1.2e-06 57.4 160 45.6
SEGI_26721 Sequoiadendron giganteum HOM05D020219 ORTHO05D023531 1.2e-06 57.4 130 52.3


User provided reference genes

Program Settings