Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold15G07181 Striga asiatica HOM05D011902 ORTHO05D009547 2.2e-129 465.7 246 100.0
SGA_v2.0_scaffold34G13598 Striga asiatica HOM05D011902 ORTHO05D399664 1.7e-92 343.2 262 71.8
SGA_v2.0_scaffold204G41598 Striga asiatica HOM05D011902 ORTHO05D401495 8.3e-52 208.0 111 92.8
SGA_v2.0_scaffold110G31310 Striga asiatica HOM05D011902 ORTHO05D406673 2.4e-51 206.5 170 67.6
SGA_v2.0_scaffold636G53301 Striga asiatica HOM05D011902 ORTHO05D402207 6.2e-39 165.2 159 62.3
SGA_v2.0_scaffold480G52304 Striga asiatica HOM05D011902 ORTHO05D001718 1.5e-37 160.6 135 65.9
SGA_v2.0_scaffold2694G54183 Striga asiatica HOM05D011902 ORTHO05D402589 1.2e-31 141.0 74 94.6
SGA_v2.0_scaffold68G22935 Striga asiatica HOM05D011902 ORTHO05D403213 1.6e-31 140.6 92 79.3
SGA_v2.0_scaffold353G49705 Striga asiatica HOM05D011902 ORTHO05D399391 2.1e-23 113.6 100 68.0
SGA_v2.0_scaffold16G07543 Striga asiatica HOM05D006860 ORTHO05D009547 5.3e-22 109.0 60 95.0
SGA_v2.0_scaffold120G32852 Striga asiatica HOM05D006860 ORTHO05D009547 2.1e-18 97.1 60 83.3
SGA_v2.0_scaffold35G13991 Striga asiatica HOM05D011902 ORTHO05D405618 2.1e-18 97.1 186 43.5
SGA_v2.0_scaffold479G52252 Striga asiatica HOM05D011902 ORTHO05D402301 9.6e-16 88.2 64 73.4
SGA_v2.0_scaffold101G29776 Striga asiatica HOM05D011902 ORTHO05D404471 8.1e-15 85.1 183 45.4
Oeu026500.1 Olea europaea HOM05D006860 ORTHO05D009547 7.6e-13 78.6 60 65.0
Migut.A00808 Erythranthe guttata HOM05D006860 ORTHO05D009547 2.2e-12 77.0 59 66.1
Peaxi162Scf00002g00093 Petunia axillaris HOM05D006860 ORTHO05D009547 2.7e-10 70.1 57 59.6
Nitab4.5_0000993g0040 Nicotiana tabacum HOM05D006860 ORTHO05D009547 4.6e-10 69.3 57 59.6
Nitab4.5_0012289g0010 Nicotiana tabacum HOM05D006860 ORTHO05D009547 4.6e-10 69.3 57 59.6
FvH4_5g00261 Fragaria vesca HOM05D006860 ORTHO05D009547 6.0e-10 68.9 58 56.9
FAN04G1232 Fragaria x ananassa HOM05D006860 ORTHO05D009547 6.0e-10 68.9 58 56.9
FAN13G2943 Fragaria x ananassa HOM05D006860 ORTHO05D009547 6.0e-10 68.9 58 56.9
Lalb_Chr23g0276231 Lupinus albus HOM05D006860 ORTHO05D009547 1.0e-09 68.2 61 57.4
PSO017G2204 Papaver somniferum HOM05D006860 ORTHO05D009547 1.3e-09 67.8 58 53.4
Thecc.03G256700 Theobroma cacao HOM05D006860 ORTHO05D009547 1.8e-09 67.4 58 56.9
CANSAT21G2349 Cannabis sativa HOM05D006860 ORTHO05D009547 2.3e-09 67.0 58 60.3
RcHm_v2.0_Chr7g0202371 Rosa chinensis HOM05D006860 ORTHO05D009547 2.3e-09 67.0 58 55.2
Aqoxy7G00725 Aquilegia oxysepala HOM05D006860 ORTHO05D009547 3.0e-09 66.6 56 58.9
Glyma.15G182700 Glycine max HOM05D006860 ORTHO05D009547 3.0e-09 66.6 58 58.6
PSO170G3955 Papaver somniferum HOM05D006860 ORTHO05D009547 3.0e-09 66.6 58 51.7
SGA_v2.0_scaffold191G40457 Striga asiatica HOM05D000592 ORTHO05D001485 3.0e-09 66.6 59 66.1
ECA233G1099 Erigeron canadensis HOM05D006860 ORTHO05D009547 3.9e-09 66.2 57 52.6
DCAR_004924 Daucus carota HOM05D006860 ORTHO05D009547 5.1e-09 65.9 54 61.1
Prupe.5G075300 Prunus persica HOM05D006860 ORTHO05D009547 5.1e-09 65.9 57 56.1
CAN.G1217.16 Capsicum annuum HOM05D006860 ORTHO05D009547 6.7e-09 65.5 57 56.1
Rhsim07G0104800 Rhododendron simsii HOM05D006860 ORTHO05D009547 6.7e-09 65.5 58 53.4
Solyc08g079050.2 Solanum lycopersicum HOM05D006860 ORTHO05D009547 6.7e-09 65.5 57 56.1
PGSC0003DMG400004793 Solanum tuberosum HOM05D006860 ORTHO05D009547 6.7e-09 65.5 57 56.1
CiPaw.11G150700 Carya illinoinensis HOM05D006860 ORTHO05D009547 8.7e-09 65.1 58 56.9
QL12p013422 Quercus lobata HOM05D006860 ORTHO05D009547 8.7e-09 65.1 58 53.4
MD06G1063700 Malus domestica HOM05D006860 ORTHO05D009547 1.1e-08 64.7 57 54.4
Sabra01G0093000 Salix brachista HOM05D006860 ORTHO05D009547 1.1e-08 64.7 58 55.2
TAR375G0404 Trochodendron aralioides HOM05D006860 ORTHO05D009547 1.1e-08 64.7 58 55.2
Cc08_g12900 Coffea canephora HOM05D006860 ORTHO05D009547 1.5e-08 64.3 56 57.1
FAN08G1076 Fragaria x ananassa HOM05D006860 ORTHO05D009547 1.5e-08 64.3 59 55.9
FAN18G3824 Fragaria x ananassa HOM05D006860 ORTHO05D009547 1.5e-08 64.3 59 55.9
Manes.01G076800 Manihot esculenta HOM05D006860 ORTHO05D009547 1.5e-08 64.3 58 50.0
Ca_02280_v3 Cicer arietinum L. HOM05D006860 ORTHO05D009547 1.9e-08 63.9 62 53.2
COL.COLO4_37211 Corchorus olitorius HOM05D006860 ORTHO05D009547 1.9e-08 63.9 58 50.0
Dinv39106 Davidia involucrata HOM05D006860 ORTHO05D009547 1.9e-08 63.9 58 53.4
Duzib084G1019 Durio zibethinus HOM05D006860 ORTHO05D009547 1.9e-08 63.9 58 55.2
Potri.001G120700 Populus trichocarpa HOM05D006860 ORTHO05D009547 1.9e-08 63.9 58 53.4
vmacro14104 Vaccinium macrocarpon HOM05D006860 ORTHO05D009547 2.5e-08 63.5 58 50.0
VMungo1309G2714 Vigna mungo HOM05D006860 ORTHO05D009547 2.5e-08 63.5 58 55.2
Ca_27374_v3 Cicer arietinum L. HOM05D006860 ORTHO05D009547 3.3e-08 63.2 62 51.6
Eucgr.D02032 Eucalyptus grandis HOM05D006860 ORTHO05D009547 3.3e-08 63.2 54 57.4
Nn4g23121 Nelumbo nucifera HOM05D006860 ORTHO05D009547 3.3e-08 63.2 57 54.4
Nn6g34033 Nelumbo nucifera HOM05D006860 ORTHO05D009547 3.3e-08 63.2 57 54.4
Sopen08g027510 Solanum pennellii HOM05D006860 ORTHO05D009547 3.3e-08 63.2 57 54.4
HanXRQChr13g0394991 Helianthus annuus HOM05D006860 ORTHO05D009547 4.3e-08 62.8 58 46.6
Ca_19832_v3 Cicer arietinum L. HOM05D000030 ORTHO05D000009 5.6e-08 62.4 62 50.0
Gohir.A03G009800 Gossypium hirsutum HOM05D006860 ORTHO05D009547 5.6e-08 62.4 58 53.4
Haze_07857 Corylus avellana HOM05D006860 ORTHO05D009547 1.3e-07 61.2 55 56.4
Phvul.009G223700 Phaseolus vulgaris HOM05D006860 ORTHO05D009547 1.6e-07 60.8 55 56.4
Gohir.D03G160900 Gossypium hirsutum HOM05D006860 ORTHO05D009547 2.1e-07 60.5 58 51.7
Gorai.003G169400 Gossypium raimondii HOM05D006860 ORTHO05D009547 2.1e-07 60.5 58 51.7
unitig_27.g24920 Utricularia gibba HOM05D006860 ORTHO05D009547 2.1e-07 60.5 50 64.0
Aa31LG6G4580 Aethionema arabicum HOM05D006860 ORTHO05D009547 2.8e-07 60.1 58 50.0
arahy.Tifrunner.gnm1.ann1.26U38F Arachis hypogaea HOM05D006860 ORTHO05D009547 2.8e-07 60.1 55 58.2
arahy.Tifrunner.gnm1.ann1.NHN2FI Arachis hypogaea HOM05D006860 ORTHO05D009547 2.8e-07 60.1 55 58.2
TWI15G0511 Tripterygium wilfordii HOM05D006860 ORTHO05D009547 4.8e-07 59.3 58 50.0
Medtr2g044090 Medicago truncatula HOM05D006860 ORTHO05D009547 1.4e-06 57.8 61 52.5
Carub.0007s1871 Capsella rubella HOM05D006860 ORTHO05D009547 2.4e-06 57.0 55 50.9
Sp7g20650 Schrenkiella parvula HOM05D006860 ORTHO05D009547 3.1e-06 56.6 55 50.9
AL7G30980 Arabidopsis lyrata HOM05D006860 ORTHO05D009547 4.0e-06 56.2 55 49.1
BcaC09g51131 Brassica carinata HOM05D006860 ORTHO05D009547 4.0e-06 56.2 55 49.1
C01p16890 Brassica napus HOM05D006860 ORTHO05D009547 4.0e-06 56.2 55 49.1
BolC1t01631H Brassica oleracea HOM05D006860 ORTHO05D009547 4.0e-06 56.2 55 49.1
BraA01t01334Z Brassica rapa HOM05D006860 ORTHO05D009547 4.0e-06 56.2 55 49.1
CARHR229490 Cardamine hirsuta HOM05D006860 ORTHO05D009547 4.0e-06 56.2 55 49.1
Thhalv10026873m.g Eutrema salsugineum HOM05D006860 ORTHO05D009547 4.0e-06 56.2 55 49.1
AT4G22600 Arabidopsis thaliana HOM05D006860 ORTHO05D009547 5.3e-06 55.8 55 49.1
Psat1g138880 Pisum sativum HOM05D006860 ORTHO05D009547 6.9e-06 55.5 61 49.2
THA.LOC104813362 Tarenaya hassleriana HOM05D006860 ORTHO05D009547 6.9e-06 55.5 57 43.9
A01p13880 Brassica napus HOM05D006860 ORTHO05D009547 9.0e-06 55.1 55 47.3


User provided reference genes

Program Settings