Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold159G37698 Striga asiatica HOM05D004421 ORTHO05D005227 2.9e-51 204.9 102 100.0
SGA_v2.0_scaffold363G49953 Striga asiatica HOM05D004421 ORTHO05D005227 1.1e-45 186.4 101 92.1
SGA_v2.0_scaffold392G50685 Striga asiatica HOM05D004421 ORTHO05D005227 4.5e-44 181.0 98 89.8
Oeu013122.1 Olea europaea HOM05D004421 ORTHO05D005227 8.5e-43 176.8 99 86.9
MSTRG.12990 Avicennia marina HOM05D004421 ORTHO05D005227 3.2e-42 174.9 98 86.7
unitig_748.g8294 Utricularia gibba HOM05D004421 ORTHO05D005227 7.2e-42 173.7 99 84.8
unitig_32.g10858 Utricularia gibba HOM05D004421 ORTHO05D005227 2.7e-41 171.8 99 84.8
Oeu054302.1 Olea europaea HOM05D004421 ORTHO05D005227 4.7e-41 171.0 99 84.8
SalBow3G0779 Salvia bowleyana HOM05D004421 ORTHO05D005227 1.4e-40 169.5 99 82.8
TWI36G1565 Tripterygium wilfordii HOM05D004421 ORTHO05D005227 1.8e-40 169.1 98 84.7
MSTRG.14457 Avicennia marina HOM05D004421 ORTHO05D005227 4.0e-40 167.9 98 84.7
Ciclev10009985m.g Citrus clementina HOM05D004421 ORTHO05D005227 4.0e-40 167.9 98 82.7
Peaxi162Scf00149g00049 Petunia axillaris HOM05D004421 ORTHO05D005227 4.0e-40 167.9 98 84.7
THA.LOC104811627 Tarenaya hassleriana HOM05D004421 ORTHO05D005227 4.0e-40 167.9 98 82.7
Cpa.g.sc12.255 Carica papaya HOM05D004421 ORTHO05D005227 5.2e-40 167.5 98 81.6
Cfa014325 Carpinus fangiana HOM05D004421 ORTHO05D005227 8.8e-40 166.8 98 80.6
GSVIVG01036899001 Vitis vinifera HOM05D004421 ORTHO05D005227 8.8e-40 166.8 101 82.2
FAN02G1632 Fragaria x ananassa HOM05D004421 ORTHO05D005227 1.5e-39 166.0 98 79.6
PGR042G0750 Punica granatum HOM05D004421 ORTHO05D005227 1.5e-39 166.0 98 81.6
TWI79G1637 Tripterygium wilfordii HOM05D004421 ORTHO05D005227 1.5e-39 166.0 98 83.7
CDE04G3645 Ceratophyllum demersum HOM05D004421 ORTHO05D005227 2.0e-39 165.6 98 80.6
FvH4_6g42460 Fragaria vesca HOM05D004421 ORTHO05D005227 2.0e-39 165.6 98 79.6
FAN05G5559 Fragaria x ananassa HOM05D004421 ORTHO05D005227 2.0e-39 165.6 98 79.6
FAN09G1846 Fragaria x ananassa HOM05D004421 ORTHO05D005227 2.0e-39 165.6 98 79.6
FAN14G1774 Fragaria x ananassa HOM05D004421 ORTHO05D005227 2.0e-39 165.6 98 79.6
Gorai.005G241500 Gossypium raimondii HOM05D004421 ORTHO05D005227 2.0e-39 165.6 98 82.7
QL10p065608 Quercus lobata HOM05D004421 ORTHO05D005227 2.0e-39 165.6 98 79.6
RcHm_v2.0_Chr2g0158361 Rosa chinensis HOM05D004421 ORTHO05D005227 2.0e-39 165.6 98 79.6
THA.LOC104813431 Tarenaya hassleriana HOM05D004421 ORTHO05D005227 2.0e-39 165.6 98 81.6
Hma1.2p1_0445F.1_g154450 Hydrangea macrophylla HOM05D004421 ORTHO05D005227 2.6e-39 165.2 98 81.6
Sed0012667 Sechium edule HOM05D004421 ORTHO05D005227 2.6e-39 165.2 101 80.2
ClCG02G009100 Citrullus lanatus HOM05D004421 ORTHO05D005227 3.3e-39 164.9 98 80.6
Nitab4.5_0000138g0020 Nicotiana tabacum HOM05D004421 ORTHO05D005227 3.3e-39 164.9 101 82.2
Prupe.3G211700 Prunus persica HOM05D004421 ORTHO05D005227 3.3e-39 164.9 98 80.6
QL10p065434 Quercus lobata HOM05D004421 ORTHO05D005227 3.3e-39 164.9 98 79.6
CANSAT64G1364 Cannabis sativa HOM05D004421 ORTHO05D005227 4.4e-39 164.5 101 79.2
CAN.G149.31 Capsicum annuum HOM05D004421 ORTHO05D005227 4.4e-39 164.5 98 83.7
QL08p031014 Quercus lobata HOM05D004421 ORTHO05D005227 4.4e-39 164.5 98 79.6
ATR0665G259 Amborella trichopoda HOM05D004421 ORTHO05D005227 5.7e-39 164.1 99 79.8
Nitab4.5_0005588g0030 Nicotiana tabacum HOM05D004421 ORTHO05D005227 5.7e-39 164.1 101 82.2
Sopen02g017940 Solanum pennellii HOM05D004421 ORTHO05D005227 5.7e-39 164.1 98 83.7
PGSC0003DMG400010437 Solanum tuberosum HOM05D004421 ORTHO05D005227 5.7e-39 164.1 98 83.7
LjContig00564g0020145 Lotus japonicus HOM05D004421 ORTHO05D005227 7.5e-39 163.7 99 79.8
LjContig00564g0024160 Lotus japonicus HOM05D004421 ORTHO05D005227 7.5e-39 163.7 99 79.8
Manes.13G067100 Manihot esculenta HOM05D004421 ORTHO05D005227 7.5e-39 163.7 98 79.6
Potri.002G225600 Populus trichocarpa HOM05D004421 ORTHO05D005227 7.5e-39 163.7 98 78.6
TAR629G1061 Trochodendron aralioides HOM05D004421 ORTHO05D005227 7.5e-39 163.7 98 81.6
CSS0000360 Camellia sinensis var. sinensis HOM05D004421 ORTHO05D005227 9.7e-39 163.3 98 79.6
CSS0029217 Camellia sinensis var. sinensis HOM05D004421 ORTHO05D005227 9.7e-39 163.3 98 79.6
Glyma.14G047100 Glycine max HOM05D004421 ORTHO05D005227 9.7e-39 163.3 101 77.2
CAN.G358.76 Capsicum annuum HOM05D004421 ORTHO05D005227 1.3e-38 162.9 98 82.7
Gohir.A03G192600 Gossypium hirsutum HOM05D004421 ORTHO05D005227 1.3e-38 162.9 98 81.6
Solyc02g068770.4 Solanum lycopersicum HOM05D004421 ORTHO05D005227 1.3e-38 162.9 98 82.7
Thecc.07G030200 Theobroma cacao HOM05D004421 ORTHO05D005227 1.3e-38 162.9 98 79.6
VMungo0647G1664 Vigna mungo HOM05D004421 ORTHO05D005227 1.3e-38 162.9 101 77.2
MBI16_g23852_MAGBIO Magnolia biondii HOM05D004421 ORTHO05D005227 1.7e-38 162.5 98 77.6
Nitab4.5_0007533g0030 Nicotiana tabacum HOM05D004421 ORTHO05D005227 1.7e-38 162.5 98 80.6
Peaxi162Scf00047g00850 Petunia axillaris HOM05D004421 ORTHO05D005227 1.7e-38 162.5 98 81.6
Potri.014G157400 Populus trichocarpa HOM05D004421 ORTHO05D005227 1.7e-38 162.5 98 79.6
vmacro09354 Vaccinium macrocarpon HOM05D004421 ORTHO05D005227 1.7e-38 162.5 98 78.6
CAN.G358.77 Capsicum annuum HOM05D004421 ORTHO05D005227 2.2e-38 162.2 98 82.7
Haze_12777 Corylus avellana HOM05D004421 ORTHO05D005227 2.2e-38 162.2 98 78.6
LjContig00564g0000485 Lotus japonicus HOM05D004421 ORTHO05D005227 2.2e-38 162.2 99 78.8
LjContig00564g0024311 Lotus japonicus HOM05D004421 ORTHO05D005227 2.2e-38 162.2 99 78.8
AUR62030497 Chenopodium quinoa HOM05D004421 ORTHO05D005227 2.8e-38 161.8 101 76.2
Eucgr.B01010 Eucalyptus grandis HOM05D004421 ORTHO05D005227 2.8e-38 161.8 98 78.6
Phvul.008G212200 Phaseolus vulgaris HOM05D004421 ORTHO05D005227 2.8e-38 161.8 101 75.2
Atru.chr2.3508 Acer truncatum HOM05D004421 ORTHO05D005227 3.7e-38 161.4 98 78.6
CiPaw.08G089000 Carya illinoinensis HOM05D004421 ORTHO05D005227 3.7e-38 161.4 98 79.6
HanXRQChr04g0126911 Helianthus annuus HOM05D004421 ORTHO05D005227 3.7e-38 161.4 98 79.6
ECA236G3405 Erigeron canadensis HOM05D004421 ORTHO05D005227 4.8e-38 161.0 101 77.2
BolC2t07739H Brassica oleracea HOM05D004421 ORTHO05D005227 6.3e-38 160.6 101 76.2
Carub.0008s1546 Capsella rubella HOM05D004421 ORTHO05D005227 6.3e-38 160.6 101 76.2
AUR62030797 Chenopodium quinoa HOM05D004421 ORTHO05D005227 6.3e-38 160.6 101 75.2
CiPaw.03G156500 Carya illinoinensis HOM05D004421 ORTHO05D005227 8.2e-38 160.2 98 77.6
CsaV3_2G034620 Cucumis sativus L. HOM05D004421 ORTHO05D005227 8.2e-38 160.2 98 78.6
Lalb_Chr10g0105671 Lupinus albus HOM05D004421 ORTHO05D005227 8.2e-38 160.2 99 78.8
Rhsim04G0051300 Rhododendron simsii HOM05D004421 ORTHO05D005227 8.2e-38 160.2 98 80.6
Sabra02G0172700 Salix brachista HOM05D004421 ORTHO05D005227 8.2e-38 160.2 98 76.5
Sc12g0002130 Simmondsia chinensis HOM05D004421 ORTHO05D005227 8.2e-38 160.2 98 78.6
BcaB05g22185 Brassica carinata HOM05D004421 ORTHO05D005227 1.1e-37 159.8 101 75.2
DCAR_019262 Daucus carota HOM05D004421 ORTHO05D005227 1.1e-37 159.8 98 77.6
Gohir.D02G213600 Gossypium hirsutum HOM05D004421 ORTHO05D005227 1.1e-37 159.8 98 80.6
Hma1.2p1_0177F.1_g077900 Hydrangea macrophylla HOM05D004421 ORTHO05D005227 1.1e-37 159.8 98 77.6
Hma1.2p1_0177F.1_g077905 Hydrangea macrophylla HOM05D004421 ORTHO05D005227 1.1e-37 159.8 98 77.6
Nitab4.5_0001288g0200 Nicotiana tabacum HOM05D004421 ORTHO05D005227 1.1e-37 159.8 98 79.6
arahy.Tifrunner.gnm1.ann1.J4LN0V Arachis hypogaea HOM05D004421 ORTHO05D005227 1.4e-37 159.5 99 75.8
BraA02t06048Z Brassica rapa HOM05D004421 ORTHO05D005227 1.4e-37 159.5 101 75.2
arahy.Tifrunner.gnm1.ann1.BKRM87 Arachis hypogaea HOM05D004421 ORTHO05D005227 1.8e-37 159.1 99 75.8
C02p16370 Brassica napus HOM05D004421 ORTHO05D005227 1.8e-37 159.1 101 75.2
CDE06G2669 Ceratophyllum demersum HOM05D004421 ORTHO05D005227 1.8e-37 159.1 98 77.6
DCAR_012923 Daucus carota HOM05D004421 ORTHO05D005227 1.8e-37 159.1 98 77.6
Aa31LG3G11160 Aethionema arabicum HOM05D004421 ORTHO05D005227 2.4e-37 158.7 98 76.5
Glyma.02G269800 Glycine max HOM05D004421 ORTHO05D005227 2.4e-37 158.7 101 75.2
AT5G55140 Arabidopsis thaliana HOM05D004421 ORTHO05D005227 3.1e-37 158.3 101 74.3
Duzib128G1691 Durio zibethinus HOM05D004421 ORTHO05D005227 3.1e-37 158.3 98 79.6
Lsat_1_v5_gn_7_92700 Lactuca sativa HOM05D004421 ORTHO05D005227 3.1e-37 158.3 98 77.6
AL8G30670 Arabidopsis lyrata HOM05D004421 ORTHO05D005227 4.1e-37 157.9 101 73.3
A02p09830 Brassica napus HOM05D004421 ORTHO05D005227 4.1e-37 157.9 101 74.3
Cc05_g14180 Coffea canephora HOM05D004421 ORTHO05D005227 4.1e-37 157.9 101 76.2
Psat4g220560 Pisum sativum HOM05D004421 ORTHO05D005227 4.1e-37 157.9 99 76.8
BcaB08g35879 Brassica carinata HOM05D004421 ORTHO05D005227 5.3e-37 157.5 101 74.3
BcaC04g20265 Brassica carinata HOM05D004421 ORTHO05D005227 5.3e-37 157.5 101 74.3
BraA10t43337Z Brassica rapa HOM05D004421 ORTHO05D005227 5.3e-37 157.5 101 74.3
Medtr8g016300 Medicago truncatula HOM05D004421 ORTHO05D005227 5.3e-37 157.5 99 77.8
Medtr8g099150 Medicago truncatula HOM05D004421 ORTHO05D005227 7.0e-37 157.1 99 76.8
Ca_23316_v3 Cicer arietinum L. HOM05D004421 ORTHO05D005227 9.1e-37 156.8 101 73.3
ECA234G2260 Erigeron canadensis HOM05D004421 ORTHO05D005227 1.2e-36 156.4 98 77.6
Thhalv10015072m.g Eutrema salsugineum HOM05D004421 ORTHO05D005227 1.2e-36 156.4 101 74.3
SHI33915 Sapria himalayana HOM05D004421 ORTHO05D005227 1.2e-36 156.4 101 74.3
Sp6g17090 Schrenkiella parvula HOM05D004421 ORTHO05D005227 1.2e-36 156.4 101 73.3
Aqoxy7G01112 Aquilegia oxysepala HOM05D004421 ORTHO05D005227 1.6e-36 156.0 101 75.2
Ah.12g058680 Amaranthus hybridus HOM05D004421 ORTHO05D005227 2.0e-36 155.6 98 78.6
Hund24697 Selenicereus undatus HOM05D004421 ORTHO05D005227 3.5e-36 154.8 98 79.6
EL10Ac5g12553 Beta vulgaris HOM05D004421 ORTHO05D005227 5.9e-36 154.1 98 78.6
TPR.G7933 Trifolium pratense HOM05D004421 ORTHO05D005227 7.7e-36 153.7 99 74.7
Aqoxy6G00590 Aquilegia oxysepala HOM05D004421 ORTHO05D005227 1.0e-35 153.3 101 74.3
A05p12050 Brassica napus HOM05D004421 ORTHO05D005227 1.3e-35 152.9 102 73.5
A10p12420 Brassica napus HOM05D004421 ORTHO05D005227 1.3e-35 152.9 102 73.5
C09p45840 Brassica napus HOM05D004421 ORTHO05D005227 1.3e-35 152.9 102 73.5
BolC9t57441H Brassica oleracea HOM05D004421 ORTHO05D005227 1.3e-35 152.9 102 73.5
CARHR268500 Cardamine hirsuta HOM05D004421 ORTHO05D005227 1.3e-35 152.9 101 73.3
Cc05_g02530 Coffea canephora HOM05D004421 ORTHO05D005227 1.3e-35 152.9 101 73.3
Rhsim06G0166700 Rhododendron simsii HOM05D004421 ORTHO05D005227 1.7e-35 152.5 98 76.5
TPR.G1800 Trifolium pratense HOM05D004421 ORTHO05D005227 2.2e-35 152.1 99 73.7
MELO3C019309.2 Cucumis melo HOM05D004421 ORTHO05D005227 8.5e-35 150.2 90 80.0
HPP92_026149 Vanilla planifolia HOM05D004421 ORTHO05D005227 8.5e-35 150.2 97 74.2
Zm00001eb211500 Zea mays HOM05D004421 ORTHO05D005227 8.5e-35 150.2 98 75.5
Lsat_1_v5_gn_5_123820 Lactuca sativa HOM05D004421 ORTHO05D005227 1.6e-33 146.0 93 75.3
COL.COLO4_09709 Corchorus olitorius HOM05D004421 ORTHO05D005227 2.7e-33 145.2 98 72.4
Eucgr.B01013 Eucalyptus grandis HOM05D004421 ORTHO05D005227 3.6e-33 144.8 95 75.8
Os08g0110100 Oryza sativa ssp. japonica HOM05D004421 ORTHO05D005227 4.7e-33 144.4 100 72.0
PSO017G4413 Papaver somniferum HOM05D004421 ORTHO05D005227 1.4e-32 142.9 98 69.4
PSO675G5827 Papaver somniferum HOM05D004421 ORTHO05D005227 1.4e-32 142.9 98 69.4
CSS0048822 Camellia sinensis var. sinensis HOM05D004421 ORTHO05D005227 1.1e-29 133.3 98 68.4
BcaC03g14260 Brassica carinata HOM05D004421 ORTHO05D005227 2.7e-28 128.6 81 75.3
TPR.G40166 Trifolium pratense HOM05D004421 ORTHO05D005227 6.5e-27 124.0 83 73.5
BraA03t14310Z Brassica rapa HOM05D004421 ORTHO05D005227 8.6e-27 123.6 96 66.7
SEGI_06591 Sequoiadendron giganteum HOM05D004421 ORTHO05D005227 1.5e-26 122.9 101 57.4
A08p21130 Brassica napus HOM05D004421 ORTHO05D005227 1.9e-26 122.5 96 66.7
vmacro12170 Vaccinium macrocarpon HOM05D004421 ORTHO05D005227 3.6e-25 118.2 82 74.4
BcaC03g14258 Brassica carinata HOM05D004421 ORTHO05D005227 6.1e-25 117.5 85 69.4
Os06g0339800 Oryza sativa ssp. japonica HOM05D004421 ORTHO05D005227 4.0e-24 114.8 97 61.9
Lj2g0010759 Lotus japonicus HOM05D004421 ORTHO05D005227 5.2e-24 114.4 99 61.6
Dinv22240 Davidia involucrata HOM05D004421 ORTHO05D005227 5.7e-23 110.9 66 81.8
Mapoly0058s0042 Marchantia polymorpha HOM05D004421 ORTHO05D005227 6.3e-22 107.5 87 62.1
FvH4_6g04610 Fragaria vesca HOM05D004421 ORTHO05D005227 4.1e-21 104.8 75 73.3
AagrBONN_evm.TU.Sc2ySwM_344.5034 Anthoceros agrestis HOM05D004421 ORTHO05D005227 2.7e-20 102.1 92 57.6
Migut.H01800 Erythranthe guttata HOM05D004421 ORTHO05D005227 6.6e-19 97.4 56 83.9
Eucgr.B01894 Eucalyptus grandis HOM05D004421 ORTHO05D005227 6.6e-19 97.4 65 72.3
Hma1.2p1_2381F.1_g321010 Hydrangea macrophylla HOM05D004421 ORTHO05D005227 2.5e-18 95.5 82 59.8
Pp3c26_2200 Physcomitrium patens HOM05D004421 ORTHO05D005227 3.3e-18 95.1 84 57.1
HanXRQChr16g0506671 Helianthus annuus HOM05D004421 ORTHO05D005227 1.1e-13 80.1 48 79.2
RcHm_v2.0_Chr4g0419171 Rosa chinensis HOM05D004421 ORTHO05D005227 1.1e-13 80.1 98 45.9
Potri.010G076275 Populus trichocarpa HOM05D004421 ORTHO05D005227 1.4e-13 79.7 79 55.7
GSVIVG01030492001 Vitis vinifera HOM05D004421 ORTHO05D005227 1.8e-13 79.3 48 79.2
Manes.12G070801 Manihot esculenta HOM05D004421 ORTHO05D005227 4.1e-13 78.2 45 80.0
MD09G1112900 Malus domestica HOM05D004421 ORTHO05D005227 1.6e-12 76.3 46 76.1
SMO172G0081 Selaginella moellendorffii HOM05D004421 ORTHO05D005227 1.7e-11 72.8 88 44.3
Cre05.g234659 Chlamydomonas reinhardtii HOM05D004421 ORTHO05D005227 3.1e-08 62.0 84 42.9
Nn2g15167 Nelumbo nucifera HOM05D004421 ORTHO05D005227 3.1e-08 62.0 38 78.9


User provided reference genes

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